Search of human proteins with 5902118

Search of human proteins with 5902118

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5902118 secreted phosphoprotein 2, 24kDa precursor [Homo
sapiens]
         (211 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5902118 secreted phosphoprotein 2, 24kDa precursor [Homo sapi...   428   e-120
gi|4504893 kininogen 1 isoform 2 [Homo sapiens]                        34   0.079
gi|156231037 kininogen 1 isoform 1 [Homo sapiens]                      34   0.079
gi|20302139 cystatin F [Homo sapiens]                                  33   0.23 
gi|39753970 cathelicidin antimicrobial peptide [Homo sapiens]          30   1.1  
gi|87298937 centrosomal protein 110kDa [Homo sapiens]                  30   1.1  
gi|46575934 KIAA1680 protein isoform 2 [Homo sapiens]                  30   2.0  
gi|222831647 KIAA1680 protein isoform 1 [Homo sapiens]                 30   2.0  
gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo s...    29   3.3  
gi|146260268 Smith-Magenis syndrome chromosome region, candidate...    28   4.4  
gi|150010540 FERM domain containing 4B [Homo sapiens]                  28   7.4  
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]            27   9.7  
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]            27   9.7  
gi|7662126 signal-induced proliferation-associated 1 like 1 [Hom...    27   9.7  

>gi|5902118 secreted phosphoprotein 2, 24kDa precursor [Homo
           sapiens]
          Length = 211

 Score =  428 bits (1101), Expect = e-120
 Identities = 211/211 (100%), Positives = 211/211 (100%)

Query: 1   MISRMEKMTMMMKILIMFALGMNYWSCSGFPVYDYDPSSLRDALSASVVKVNSQSLSPYL 60
           MISRMEKMTMMMKILIMFALGMNYWSCSGFPVYDYDPSSLRDALSASVVKVNSQSLSPYL
Sbjct: 1   MISRMEKMTMMMKILIMFALGMNYWSCSGFPVYDYDPSSLRDALSASVVKVNSQSLSPYL 60

Query: 61  FRAFRSSLKRVEVLDENNLVMNLEFSIRETTCRKDSGEDPATCAFQRDYYVSTAVCRSTV 120
           FRAFRSSLKRVEVLDENNLVMNLEFSIRETTCRKDSGEDPATCAFQRDYYVSTAVCRSTV
Sbjct: 61  FRAFRSSLKRVEVLDENNLVMNLEFSIRETTCRKDSGEDPATCAFQRDYYVSTAVCRSTV 120

Query: 121 KVSAQQVQGVHARCSWSSSTSESYSSEEMIFGDMLGSHKWRNNYLFGLISDESISEQFYD 180
           KVSAQQVQGVHARCSWSSSTSESYSSEEMIFGDMLGSHKWRNNYLFGLISDESISEQFYD
Sbjct: 121 KVSAQQVQGVHARCSWSSSTSESYSSEEMIFGDMLGSHKWRNNYLFGLISDESISEQFYD 180

Query: 181 RSLGIMRRVLPPGNRRYPNHRHRARINTDFE 211
           RSLGIMRRVLPPGNRRYPNHRHRARINTDFE
Sbjct: 181 RSLGIMRRVLPPGNRRYPNHRHRARINTDFE 211


>gi|4504893 kininogen 1 isoform 2 [Homo sapiens]
          Length = 427

 Score = 34.3 bits (77), Expect = 0.079
 Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)

Query: 40  LRDALSASVVKVNSQSLSPYLFRAFRSSLKRVEVLDENNLVMNLEFSIRETTCRKDSGED 99
           L + L+ ++ K+N+++ + + F+       RV+V+        ++F  RETTC K+S E+
Sbjct: 278 LEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKYF--IDFVARETTCSKESNEE 335



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 34  DYDPSSLRDALSASVVKVNSQSLSPYLFRAFRSSLKRVEVLDENNLVMNLEFSIRETTCR 93
           D +   L  A+ A++ K NSQ+ S   F  +R +     V   ++   + ++ I+E  C 
Sbjct: 27  DCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRITEATKTV--GSDTFYSFKYEIKEGDCP 84

Query: 94  KDSGEDPATCAFQRDYYVSTAVCRSTV 120
             SG+    C ++     +T  C +TV
Sbjct: 85  VQSGKTWQDCEYKDAAKAATGECTATV 111


>gi|156231037 kininogen 1 isoform 1 [Homo sapiens]
          Length = 644

 Score = 34.3 bits (77), Expect = 0.079
 Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 2/60 (3%)

Query: 40  LRDALSASVVKVNSQSLSPYLFRAFRSSLKRVEVLDENNLVMNLEFSIRETTCRKDSGED 99
           L + L+ ++ K+N+++ + + F+       RV+V+        ++F  RETTC K+S E+
Sbjct: 278 LEETLTHTITKLNAENNATFYFKIDNVKKARVQVVAGKKYF--IDFVARETTCSKESNEE 335



 Score = 30.0 bits (66), Expect = 1.5
 Identities = 22/87 (25%), Positives = 40/87 (45%), Gaps = 2/87 (2%)

Query: 34  DYDPSSLRDALSASVVKVNSQSLSPYLFRAFRSSLKRVEVLDENNLVMNLEFSIRETTCR 93
           D +   L  A+ A++ K NSQ+ S   F  +R +     V   ++   + ++ I+E  C 
Sbjct: 27  DCNDKDLFKAVDAALKKYNSQNQSNNQFVLYRITEATKTV--GSDTFYSFKYEIKEGDCP 84

Query: 94  KDSGEDPATCAFQRDYYVSTAVCRSTV 120
             SG+    C ++     +T  C +TV
Sbjct: 85  VQSGKTWQDCEYKDAAKAATGECTATV 111


>gi|20302139 cystatin F [Homo sapiens]
          Length = 167

 Score = 32.7 bits (73), Expect = 0.23
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 6/97 (6%)

Query: 29  GFP--VYDYDPSSLRDALSASVVKVNSQSLSPYLFRAFRSSLKRVEVLDENNLVMNLEFS 86
           GFP  +   DP  L+ A   SV K N+ +   +LF+  R +   V+++    L   LE  
Sbjct: 59  GFPKTIKTNDPGVLQ-AARYSVEKFNNCTNDMFLFKESRITRALVQIV--KGLKYMLEVE 115

Query: 87  IRETTCRKDSGEDPATCAFQRDYYV-STAVCRSTVKV 122
           I  TTC+K+       C FQ ++ +  T  C S V V
Sbjct: 116 IGRTTCKKNQHLRLDDCDFQTNHTLKQTLSCYSEVWV 152


>gi|39753970 cathelicidin antimicrobial peptide [Homo sapiens]
          Length = 170

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 3/85 (3%)

Query: 39  SLRDALSASVVKVNSQSLSPYLFRAFRSSLKRVEVLDENNLVMNLEFSIRETTCRKDSGE 98
           S ++A+  ++  +N +S    L+R       R  +  + +    + F+++ET C + + +
Sbjct: 34  SYKEAVLRAIDGINQRSSDANLYRLLDLD-PRPTMDGDPDTPKPVSFTVKETVCPRTTQQ 92

Query: 99  DPATCAFQRDYYVSTAVCRSTVKVS 123
            P  C F++D  V    C  TV ++
Sbjct: 93  SPEDCDFKKDGLVKR--CMGTVTLN 115


>gi|87298937 centrosomal protein 110kDa [Homo sapiens]
          Length = 2325

 Score = 30.4 bits (67), Expect = 1.1
 Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 6/54 (11%)

Query: 37 PSSLRDALSASVVKVNSQSLSPYL------FRAFRSSLKRVEVLDENNLVMNLE 84
          PSS    + +S+  + S+SLSP +      F +     ++VE+ DENN++++ +
Sbjct: 16 PSSSHSPIPSSMSNMRSRSLSPLIGSETLPFHSGGQWCEQVEIADENNMLLDYQ 69


>gi|46575934 KIAA1680 protein isoform 2 [Homo sapiens]
          Length = 677

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 4/35 (11%)

Query: 74  LDENNLVMNLEF----SIRETTCRKDSGEDPATCA 104
           LDE++L+++LEF    S+  + CR+DS     +CA
Sbjct: 514 LDEDDLMLDLEFLEEQSLHPSVCREDSYHSVVSCA 548


>gi|222831647 KIAA1680 protein isoform 1 [Homo sapiens]
          Length = 900

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 14/35 (40%), Positives = 23/35 (65%), Gaps = 4/35 (11%)

Query: 74  LDENNLVMNLEF----SIRETTCRKDSGEDPATCA 104
           LDE++L+++LEF    S+  + CR+DS     +CA
Sbjct: 514 LDEDDLMLDLEFLEEQSLHPSVCREDSYHSVVSCA 548


>gi|33457330 tetratricopeptide repeat domain 14 isoform a [Homo
           sapiens]
          Length = 770

 Score = 28.9 bits (63), Expect = 3.3
 Identities = 29/120 (24%), Positives = 49/120 (40%), Gaps = 14/120 (11%)

Query: 98  EDPATCAFQRDYYVSTAVCRSTVKVSAQQVQGVHARCSWSSSTSESYSSEEMIFG----- 152
           EDP      RD+Y S      + K         H     +SS S   +SE+ I+G     
Sbjct: 595 EDP------RDFYNSYKTQAGSSKTEKPYKSERHFSSRRNSSDSFCRNSEDKIYGYRRFE 648

Query: 153 -DMLGSHKWRNNYLFGLI--SDESISEQFYDRSLGIMRRVLPPGNRRYPNHRHRARINTD 209
            D+ G  +    +  G +  S    S ++  +S+   ++    G+R +  H  R R+NT+
Sbjct: 649 KDIEGRKEHYRRWEPGSVRHSTSPASSEYSWKSVEKYKKYAHSGSRDFSRHEQRYRLNTN 708


>gi|146260268 Smith-Magenis syndrome chromosome region, candidate 8
           [Homo sapiens]
          Length = 937

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 26  SCSGFPVYDYDPSSLRDALSASVVKVNSQS 55
           SC GFP Y+ DPS L  +   S   +++ S
Sbjct: 643 SCEGFPAYELDPSHLLASRDISKTSLDNYS 672


>gi|150010540 FERM domain containing 4B [Homo sapiens]
          Length = 1034

 Score = 27.7 bits (60), Expect = 7.4
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 5/69 (7%)

Query: 129 GVHARCSWSSSTSESYSSEEMIFGDMLGSHKWRNNYLFGLISDESISEQFYDRSLGIMRR 188
           G+   CS SS  S SYSS          S  WR     GL   E+ +   Y    G +  
Sbjct: 934 GLQVPCSPSSRAS-SYSS----VSSTNASGNWRTQLTIGLSDYETPAHSSYTSCYGNVYN 988

Query: 189 VLPPGNRRY 197
            LP  +R+Y
Sbjct: 989 PLPSPSRQY 997


>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 375

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 16/57 (28%), Positives = 25/57 (43%), Gaps = 8/57 (14%)

Query: 90  TTCRKDSGEDPATCAFQRDYYVSTAVCRSTVKVSAQQVQGVHARCSWSSSTSESYSS 146
           ++C   S +  +TC+ Q     ST  C+S+   S          C+W SS + S  S
Sbjct: 16  SSCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTS--------CNWQSSRTSSTCS 64



 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 90  TTCR-KDSGEDPATCAFQRDYYVSTAVCRSTVKVSAQ---QVQGVHARCSWSSSTSESYS 145
           +TC  + SG    +C++Q     ST  C+S+   S     Q  G  + CS  SS + S S
Sbjct: 234 STCSCQSSGTSSTSCSWQSSRTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTS 293


>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 375

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)

Query: 90  TTCR-KDSGEDPATCAFQRDYYVSTAVCRSTVKVSAQ---QVQGVHARCSWSSSTSESYS 145
           +TC  + SG    +C++Q     ST  C+S+   S     Q  G  + CS  SS + S S
Sbjct: 234 STCSCQSSGTSSTSCSWQSSRTSSTCSCQSSRTSSTSCSCQSSGTSSTCSCQSSGTSSTS 293


>gi|7662126 signal-induced proliferation-associated 1 like 1 [Homo
            sapiens]
          Length = 1804

 Score = 27.3 bits (59), Expect = 9.7
 Identities = 17/48 (35%), Positives = 22/48 (45%)

Query: 137  SSSTSESYSSEEMIFGDMLGSHKWRNNYLFGLISDESISEQFYDRSLG 184
            SS+ S ++S E+   GD   S     NYL G  +D  I    Y  S G
Sbjct: 1291 SSNASSAHSDEKWYDGDRTESELNSYNYLQGTSADSGIDTTSYGPSHG 1338


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.131    0.392 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,413,618
Number of Sequences: 37866
Number of extensions: 273942
Number of successful extensions: 630
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 620
Number of HSP's gapped (non-prelim): 19
length of query: 211
length of database: 18,247,518
effective HSP length: 98
effective length of query: 113
effective length of database: 14,536,650
effective search space: 1642641450
effective search space used: 1642641450
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.