Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 58331171
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|58331171 chaperonin containing TCP1, subunit 6A isoform b
[Homo sapiens]
(486 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|58331171 chaperonin containing TCP1, subunit 6A isoform b [Ho... 943 0.0
gi|4502643 chaperonin containing TCP1, subunit 6A isoform a [Hom... 921 0.0
gi|58331173 chaperonin containing TCP1, subunit 6B [Homo sapiens] 796 0.0
gi|58761486 chaperonin containing TCP1, subunit 3 isoform b [Hom... 204 1e-52
gi|63162572 chaperonin containing TCP1, subunit 3 isoform a [Hom... 204 2e-52
gi|24307939 chaperonin containing TCP1, subunit 5 (epsilon) [Hom... 196 5e-50
gi|58761484 chaperonin containing TCP1, subunit 3 isoform c [Hom... 181 1e-45
gi|57863257 T-complex protein 1 isoform a [Homo sapiens] 181 1e-45
gi|38455427 chaperonin containing TCP1, subunit 4 (delta) [Homo ... 179 4e-45
gi|5453607 chaperonin containing TCP1, subunit 7 isoform a [Homo... 179 7e-45
gi|5453603 chaperonin containing TCP1, subunit 2 [Homo sapiens] 162 6e-40
gi|57863259 T-complex protein 1 isoform b [Homo sapiens] 142 9e-34
gi|58331185 chaperonin containing TCP1, subunit 7 isoform b [Hom... 133 4e-31
gi|48762932 chaperonin containing TCP1, subunit 8 (theta) [Homo ... 129 8e-30
gi|7657253 T-complex protein 1 [Homo sapiens] 86 1e-16
gi|41399285 chaperonin [Homo sapiens] 45 1e-04
gi|31542947 chaperonin [Homo sapiens] 45 1e-04
gi|21735548 centrosomal protein 2 [Homo sapiens] 36 0.069
gi|4503509 eukaryotic translation initiation factor 3, subunit 1... 35 0.20
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 34 0.34
gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens] 33 0.76
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 33 0.76
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 33 0.76
gi|70980531 GGA binding partner [Homo sapiens] 33 0.76
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho... 32 0.99
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho... 32 0.99
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho... 32 0.99
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho... 32 0.99
gi|114155142 nuclear pore complex-associated protein TPR [Homo s... 32 0.99
gi|10863929 ribonuclease L [Homo sapiens] 32 1.3
>gi|58331171 chaperonin containing TCP1, subunit 6A isoform b [Homo
sapiens]
Length = 486
Score = 943 bits (2437), Expect = 0.0
Identities = 486/486 (100%), Positives = 486/486 (100%)
Query: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 60
MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 60
Query: 61 NVLLHEMGLHPRIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELA 120
NVLLHEMGLHPRIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELA
Sbjct: 61 NVLLHEMGLHPRIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELA 120
Query: 121 DVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRV 180
DVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRV
Sbjct: 121 DVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRV 180
Query: 181 EDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDS 240
EDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDS
Sbjct: 181 EDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDS 240
Query: 241 DKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLG 300
DKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLG
Sbjct: 241 DKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLG 300
Query: 301 HAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDG 360
HAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDG
Sbjct: 301 HAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDG 360
Query: 361 CVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVK 420
CVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVK
Sbjct: 361 CVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVK 420
Query: 421 IQAEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAG 480
IQAEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAG
Sbjct: 421 IQAEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAG 480
Query: 481 MSSLKG 486
MSSLKG
Sbjct: 481 MSSLKG 486
>gi|4502643 chaperonin containing TCP1, subunit 6A isoform a [Homo
sapiens]
Length = 531
Score = 921 bits (2381), Expect = 0.0
Identities = 486/531 (91%), Positives = 486/531 (91%), Gaps = 45/531 (8%)
Query: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 60
MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG
Sbjct: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 60
Query: 61 NVLLHEM---------------------------------------------GLHPRIIT 75
NVLLHEM GLHPRIIT
Sbjct: 61 NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT 120
Query: 76 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK 135
EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK
Sbjct: 121 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK 180
Query: 136 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYE 195
KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYE
Sbjct: 181 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYE 240
Query: 196 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF 255
KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF
Sbjct: 241 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF 300
Query: 256 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF 315
SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF
Sbjct: 301 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF 360
Query: 316 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE 375
TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE
Sbjct: 361 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE 420
Query: 376 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD 435
ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD
Sbjct: 421 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD 480
Query: 436 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG 486
LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG
Sbjct: 481 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG 531
>gi|58331173 chaperonin containing TCP1, subunit 6B [Homo sapiens]
Length = 530
Score = 796 bits (2055), Expect = 0.0
Identities = 411/530 (77%), Positives = 455/530 (85%), Gaps = 45/530 (8%)
Query: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 60
MAA+K +N KAEVARA+AALAVNI AARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG
Sbjct: 1 MAAIKAVNSKAEVARARAALAVNICAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG 60
Query: 61 NVLLHEM---------------------------------------------GLHPRIIT 75
NVLL EM GLHPRII
Sbjct: 61 NVLLDEMQIQHPTASLIAKVATAQDDVTGDGTTSNVLIIGELLKQADLYISEGLHPRIIA 120
Query: 76 EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK 135
EGFEAAK KAL+ LEEVKV++EM R+ L+DVARTSL+TKVHAELADVLTE VVDS+LA++
Sbjct: 121 EGFEAAKIKALEVLEEVKVTKEMKRKILLDVARTSLQTKVHAELADVLTEVVVDSVLAVR 180
Query: 136 KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYE 195
+ PIDLFM+EIMEMKHK TDT LI+GLVLDHGARHPDMKKRVEDA+IL CNVSLEYE
Sbjct: 181 RPGYPIDLFMVEIMEMKHKLGTDTKLIQGLVLDHGARHPDMKKRVEDAFILICNVSLEYE 240
Query: 196 KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF 255
KTEVNSGFFYK+AEE+EKLVKAERKFIEDRV+KII+LK KVC S+KGFVVINQKGIDPF
Sbjct: 241 KTEVNSGFFYKTAEEKEKLVKAERKFIEDRVQKIIDLKDKVCAQSNKGFVVINQKGIDPF 300
Query: 256 SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF 315
SLD+L+K GIVALRRAKRRNMERL+LACGG+A+NSF+DL+ DCLGHAGLVYEYTLGEEKF
Sbjct: 301 SLDSLAKHGIVALRRAKRRNMERLSLACGGMAVNSFEDLTVDCLGHAGLVYEYTLGEEKF 360
Query: 316 TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE 375
TFIE+C NP SVTLL+KGPNKHTLTQ+KDA+RDGLRA+KNAI+DGC+VPGAGA+EVAMAE
Sbjct: 361 TFIEECVNPCSVTLLVKGPNKHTLTQVKDAIRDGLRAIKNAIEDGCMVPGAGAIEVAMAE 420
Query: 376 ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD 435
AL+ +K S+KGRA+LGVQAFADALLIIPKVLAQN+G+D QETLVK+QAEH ES QLVGVD
Sbjct: 421 ALVTYKNSIKGRARLGVQAFADALLIIPKVLAQNAGYDPQETLVKVQAEHVESKQLVGVD 480
Query: 436 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 485
LNTGEPMVAA+ GVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK
Sbjct: 481 LNTGEPMVAADAGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLK 530
>gi|58761486 chaperonin containing TCP1, subunit 3 isoform b [Homo
sapiens]
Length = 544
Score = 204 bits (519), Expect = 1e-52
Identities = 132/506 (26%), Positives = 258/506 (50%), Gaps = 60/506 (11%)
Query: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMG-------------- 68
NI+AA+ + D++RT LGPK MKML+ G I +T DGN +L E+
Sbjct: 26 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISR 85
Query: 69 ------------------------------LHPRIITEGFEAAKEKALQFLEEVKVSREM 98
+HP ++ + A + + L+++ + ++
Sbjct: 86 TQDEEVGDGTTSVIILGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVDI 145
Query: 99 -DRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQD---EPIDLFMIEIME-MKH 153
D + ++++ +S+ TK + + + +D++ ++ ++ + ID+ +E +
Sbjct: 146 SDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIPG 205
Query: 154 KSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREK 213
D+ ++RG++++ HP M++ +++ I+ + SLEY+K E + E+ +
Sbjct: 206 GIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFTR 265
Query: 214 LVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKR 273
+++ E ++I+ + II+LK V VI +KGI + L + I A+RR ++
Sbjct: 266 ILQMEEEYIQQLCEDIIQLKPDV---------VITEKGISDLAQHYLMRANITAIRRVRK 316
Query: 274 RNMERLTLACGGVALNSFDDLSPDCLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLIK 332
+ R+ ACG ++ ++L D +G AGL+ +G+E FTFI C +P++ T+L++
Sbjct: 317 TDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILLR 376
Query: 333 GPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGV 392
G +K L++++ ++D ++ +N + D +VPG GA E+A+A AL + ++ G Q
Sbjct: 377 GASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWPY 436
Query: 393 QAFADALLIIPKVLAQNSGFDLQETLVKIQAEHS-ESGQLVGVDLNTGEPMVAAEVGVWD 451
+A A AL +IP+ L QN G L ++A+H+ E+ + GV+ TG + E+G+W+
Sbjct: 437 RAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIWE 496
Query: 452 NYCVKKQLLHSCTVIATNILLVDEIM 477
VK Q + A +L +D+I+
Sbjct: 497 PLAVKLQTYKTAVETAVLLLRIDDIV 522
>gi|63162572 chaperonin containing TCP1, subunit 3 isoform a [Homo
sapiens]
Length = 545
Score = 204 bits (518), Expect = 2e-52
Identities = 132/507 (26%), Positives = 258/507 (50%), Gaps = 61/507 (12%)
Query: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMG-------------- 68
NI+AA+ + D++RT LGPK MKML+ G I +T DGN +L E+
Sbjct: 26 NINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMTNDGNAILREIQVQHPAAKSMIEISR 85
Query: 69 -------------------------------LHPRIITEGFEAAKEKALQFLEEVKVSRE 97
+HP ++ + A + + L+++ + +
Sbjct: 86 TQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPTVVISAYRKALDDMISTLKKISIPVD 145
Query: 98 M-DRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQD---EPIDLFMIEIME-MK 152
+ D + ++++ +S+ TK + + + +D++ ++ ++ + ID+ +E +
Sbjct: 146 ISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKMVQFEENGRKEIDIKKYARVEKIP 205
Query: 153 HKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEERE 212
D+ ++RG++++ HP M++ +++ I+ + SLEY+K E + E+
Sbjct: 206 GGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLDSSLEYKKGESQTDIEITREEDFT 265
Query: 213 KLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAK 272
++++ E ++I+ + II+LK V VI +KGI + L + I A+RR +
Sbjct: 266 RILQMEEEYIQQLCEDIIQLKPDV---------VITEKGISDLAQHYLMRANITAIRRVR 316
Query: 273 RRNMERLTLACGGVALNSFDDLSPDCLGH-AGLVYEYTLGEEKFTFIEKCNNPRSVTLLI 331
+ + R+ ACG ++ ++L D +G AGL+ +G+E FTFI C +P++ T+L+
Sbjct: 317 KTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYFTFITDCKDPKACTILL 376
Query: 332 KGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLG 391
+G +K L++++ ++D ++ +N + D +VPG GA E+A+A AL + ++ G Q
Sbjct: 377 RGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAHALTEKSKAMTGVEQWP 436
Query: 392 VQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHS-ESGQLVGVDLNTGEPMVAAEVGVW 450
+A A AL +IP+ L QN G L ++A+H+ E+ + GV+ TG + E+G+W
Sbjct: 437 YRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGVNGETGTLVDMKELGIW 496
Query: 451 DNYCVKKQLLHSCTVIATNILLVDEIM 477
+ VK Q + A +L +D+I+
Sbjct: 497 EPLAVKLQTYKTAVETAVLLLRIDDIV 523
>gi|24307939 chaperonin containing TCP1, subunit 5 (epsilon) [Homo
sapiens]
Length = 541
Score = 196 bits (497), Expect = 5e-50
Identities = 148/519 (28%), Positives = 248/519 (47%), Gaps = 67/519 (12%)
Query: 19 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEM----------- 67
AL +I AA+ + + +RT+LGP G KM+V GD+ +T DG +L M
Sbjct: 33 ALKSHIMAAKAVANTMRTSLGPNGLDKMMVDKDGDVTVTNDGATILSMMDVDHQIAKLMV 92
Query: 68 ----------------------------------GLHPRIITEGFEAAKEKALQFLEEVK 93
G+HP I +G+E A A++ L+++
Sbjct: 93 ELSKSQDDEIGDGTTGVVVLAGALLEEAEQLLDRGIHPIRIADGYEQAARVAIEHLDKIS 152
Query: 94 VSREMD---RETLIDVARTSLRTKV----HAELADVLTEAVVDSILAIKKQDEPIDLFMI 146
S +D E LI A+T+L +KV H ++A++ AV+ ++ ++++D +D +I
Sbjct: 153 DSVLVDIKDTEPLIQTAKTTLGSKVVNSCHRQMAEIAVNAVL-TVADMERRD--VDFELI 209
Query: 147 EIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYK 206
++ DT LI+G+++D HP M K+VEDA I E K +
Sbjct: 210 KVEGKVGGRLEDTKLIKGVIVDKDFSHPQMPKKVEDAKIAILTCPFEPPKPKTKHKLDVT 269
Query: 207 SAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIV 266
S E+ + L K E++ E+ +++I E + I Q G D + L + +
Sbjct: 270 SVEDYKALQKYEKEKFEEMIQQIKETGANLA---------ICQWGFDDEANHLLLQNNLP 320
Query: 267 ALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLG--EEKFTFIEKCNNP 324
A+R +E + +A GG + F +L+ + LG AGLV E + G ++K IE+C N
Sbjct: 321 AVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQEISFGTTKDKMLVIEQCKNS 380
Query: 325 RSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSV 384
R+VT+ I+G NK + + K ++ D L ++N I D VV G GA E++ A A+ +
Sbjct: 381 RAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVYGGGAAEISCALAVSQEADKC 440
Query: 385 KGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEH-SESGQLVGVDLNTGEPMV 443
Q ++AFADAL +IP L++NSG + +T+ +++A E +G+D
Sbjct: 441 PTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRARQVKEMNPALGIDCLHKGTND 500
Query: 444 AAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMS 482
+ V + KKQ + T + IL +D+I + G S
Sbjct: 501 MKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGES 539
>gi|58761484 chaperonin containing TCP1, subunit 3 isoform c [Homo
sapiens]
Length = 507
Score = 181 bits (460), Expect = 1e-45
Identities = 121/470 (25%), Positives = 250/470 (53%), Gaps = 24/470 (5%)
Query: 18 AALAVNISAARGLQDVLRTN---LGPKGTMKMLVSGAGDIKLTKDGNVLLHEMGLHPRII 74
A + V AA+ + ++ RT +G T ++++G L+ + L E +HP ++
Sbjct: 30 AKIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGE---MLSVAEHFL--EQQMHPTVV 84
Query: 75 TEGFEAAKEKALQFLEEVKVSREM-DRETLIDVARTSLRTKVHAELADVLTEAVVDSILA 133
+ A + + L+++ + ++ D + ++++ +S+ TK + + + +D++
Sbjct: 85 ISAYRKALDDMISTLKKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAVKM 144
Query: 134 IKKQD---EPIDLFMIEIME-MKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCN 189
++ ++ + ID+ +E + D+ ++RG++++ HP M++ +++ I+ +
Sbjct: 145 VQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVLLD 204
Query: 190 VSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQ 249
SLEY+K E + E+ ++++ E ++I+ + II+LK V VI +
Sbjct: 205 SSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDV---------VITE 255
Query: 250 KGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGH-AGLVYEY 308
KGI + L + I A+RR ++ + R+ ACG ++ ++L D +G AGL+
Sbjct: 256 KGISDLAQHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIK 315
Query: 309 TLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGA 368
+G+E FTFI C +P++ T+L++G +K L++++ ++D ++ +N + D +VPG GA
Sbjct: 316 KIGDEYFTFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGA 375
Query: 369 VEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHS-E 427
E+A+A AL + ++ G Q +A A AL +IP+ L QN G L ++A+H+ E
Sbjct: 376 SEMAVAHALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQE 435
Query: 428 SGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIM 477
+ + GV+ TG + E+G+W+ VK Q + A +L +D+I+
Sbjct: 436 NCETWGVNGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIV 485
>gi|57863257 T-complex protein 1 isoform a [Homo sapiens]
Length = 556
Score = 181 bits (459), Expect = 1e-45
Identities = 132/523 (25%), Positives = 250/523 (47%), Gaps = 78/523 (14%)
Query: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLH----------------- 65
N+ AA + ++++++LGP G KMLV GD+ +T DG +L
Sbjct: 21 NVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELAD 80
Query: 66 ----EMG------------------------LHPRIITEGFEAAKEKALQFLEEVKV--S 95
E+G +HP + G+ A ++A++++ E + +
Sbjct: 81 LQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIVNT 140
Query: 96 REMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQD------EPIDLFMIEIM 149
E+ R+ LI+ A+TS+ +K+ D VVD++LAIK D P++ + I+
Sbjct: 141 DELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVN--SVNIL 198
Query: 150 EMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAE 209
+ +S+ ++ LI G L+ M KR+ +A I + SL+ K ++ E
Sbjct: 199 KAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPE 258
Query: 210 EREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALR 269
+ +++ + E ++R++KI+ V ++ GID L + G +A+R
Sbjct: 259 KLDQIRQRESDITKERIQKILATGANV---------ILTTGGIDDMCLKYFVEAGAMAVR 309
Query: 270 RAKRRNMERLTLACGGVALNSFDDLSPD------CLGHAGLVYEYTLGEEKFTFIEKCNN 323
R +R+++R+ A G L++ +L + LG A V + + +++ I+
Sbjct: 310 RVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKA 369
Query: 324 PRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPS 383
S +++++G N +++ ++ D L VK ++ VVPG GAVE A++ L + S
Sbjct: 370 RTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATS 429
Query: 384 VKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESG--------QLVGVD 435
+ R QL + FA +LL+IP LA N+ D + + K++A H+E+ + +G+D
Sbjct: 430 MGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLD 489
Query: 436 LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMR 478
L+ G+P + GV++ VK + L T A IL +D++++
Sbjct: 490 LSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIK 532
>gi|38455427 chaperonin containing TCP1, subunit 4 (delta) [Homo
sapiens]
Length = 539
Score = 179 bits (455), Expect = 4e-45
Identities = 136/510 (26%), Positives = 245/510 (48%), Gaps = 65/510 (12%)
Query: 23 NISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEM--------------- 67
NISAA+ + D +RT+LGPKG KM+ G GD+ +T DG +L +M
Sbjct: 37 NISAAKAVADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSK 96
Query: 68 ------------------------------GLHPRIITEGFEAAKEKALQFLEEVKVSRE 97
G+HP II+E F+ A EK ++ L ++ E
Sbjct: 97 AQDIEAGDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVE 156
Query: 98 M-DRETLIDVARTSLRTKVHAELADVLTEAVVDSILAI--KKQDEPIDLFMIEIMEMKHK 154
+ DRETL++ A TSL +KV ++ + +L+ V++++ + +DL I+I++
Sbjct: 157 LSDRETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGG 216
Query: 155 SETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKL 214
+ D L+ GLVL + + RVE A I L KT++++ + +++
Sbjct: 217 TIDDCELVEGLVLTQKVSNSGIT-RVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRV 275
Query: 215 VKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGI-----DPFSLDALSKEGIVALR 269
++ ER +I + VK+I K+ C V++ QK I +L L+K I+ ++
Sbjct: 276 LREERAYILNLVKQI---KKTGCN------VLLIQKSILRDALSDLALHFLNKMKIMVIK 326
Query: 270 RAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTL-GEEKFTFIEKCNNP-RSV 327
+R ++E + G + D + D LG A L E L G K I C +P ++V
Sbjct: 327 DIEREDIEFICKTIGTKPVAHIDQFTADMLGSAELAEEVNLNGSGKLLKITGCASPGKTV 386
Query: 328 TLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGR 387
T++++G NK + + + ++ D L ++ + ++ G GA E+ +A L ++ ++ G
Sbjct: 387 TIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGM 446
Query: 388 AQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVDLNTGEPMVAAEV 447
V+AFADA+ +IP LA+N+G + T+ +++ H++ + G+++ G E
Sbjct: 447 ESYCVRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTAGINVRKGGISNILEE 506
Query: 448 GVWDNYCVKKQLLHSCTVIATNILLVDEIM 477
V V L T +IL +D+++
Sbjct: 507 LVVQPLLVSVSALTLATETVRSILKIDDVV 536
>gi|5453607 chaperonin containing TCP1, subunit 7 isoform a [Homo
sapiens]
Length = 543
Score = 179 bits (453), Expect = 7e-45
Identities = 130/518 (25%), Positives = 239/518 (46%), Gaps = 65/518 (12%)
Query: 20 LAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLH-------------- 65
L NISA + + + +RT LGP+G K++V G G ++ DG +L
Sbjct: 22 LVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISNDGATILKLLDVVHPAAKTLVD 81
Query: 66 -------------------------------EMGLHPRIITEGFEAAKEKALQFLEEV-- 92
E GLHP+II F A + A+ ++E+
Sbjct: 82 IAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQIIIRAFRTATQLAVNKIKEIAV 141
Query: 93 ---KVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEIM 149
K + R+ L A T+L +K+ ++ + VVD+++ + D+ + L MI I
Sbjct: 142 TVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVVDAVMML---DDLLQLKMIGIK 198
Query: 150 EMKHKSETDTSLIRGLVLDHGARHPDMK---KRVEDAYILTCNVSLEYEKTEVNSGFFYK 206
+++ + D+ L+ G+ + + K+ + I NV LE + + N+
Sbjct: 199 KVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALLNVELELKAEKDNAEIRVH 258
Query: 207 SAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIV 266
+ E+ + +V AE + D+++KI KV V+++ I + + +
Sbjct: 259 TVEDYQAIVDAEWNILYDKLEKIHHSGAKV---------VLSKLPIGDVATQYFADRDMF 309
Query: 267 ALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKFTFIEKCNNPRS 326
R +++R +ACGG S + LS D LG + E +G E++ F C ++
Sbjct: 310 CAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNFFTGCPKAKT 369
Query: 327 VTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKG 386
T +++G + + + + ++ D + V+ AI + VV G GA+E+ +++ L + ++ G
Sbjct: 370 CTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYLRDYSRTIPG 429
Query: 387 RAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVDLNTGEPMVAAE 446
+ QL + A+A AL IIP+ L N+GFD L K++A H++ G GVD+N + E
Sbjct: 430 KQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDINNEDIADNFE 489
Query: 447 VGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSL 484
VW+ V+ L + + A I+ VDE ++ S++
Sbjct: 490 AFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTV 527
>gi|5453603 chaperonin containing TCP1, subunit 2 [Homo sapiens]
Length = 535
Score = 162 bits (410), Expect = 6e-40
Identities = 134/533 (25%), Positives = 243/533 (45%), Gaps = 69/533 (12%)
Query: 1 MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKL--TK 58
+A V A+ RA+ A + A + D++++ LGPKG K+L+S D L T
Sbjct: 6 LAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDASLMVTN 65
Query: 59 DGNVLLHEMG---------------------------------------------LHPRI 73
DG +L +G +HP+
Sbjct: 66 DGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKKIHPQT 125
Query: 74 ITEGFEAAKEKALQFLEEVKVSREMD----RETLIDVARTSLRTKVHAELADVLTEAVVD 129
I G+ A + A + L V D R+ L+++A T+L +K+ D T+ V+
Sbjct: 126 IIAGWREATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFTKLAVE 185
Query: 130 SILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDH--GARHPDMKKRVEDAYILT 187
++L +K +L I I++ S D+ L G +LD G P KR+E+A IL
Sbjct: 186 AVLRLKGSG---NLEAIHIIKKLGGSLADSYLDEGFLLDKKIGVNQP---KRIENAKILI 239
Query: 188 CNVSLEYEKTEV-NSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVV 246
N ++ +K ++ S S + ++ AE++ ++++V++I LK +
Sbjct: 240 ANTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERI--LKHGIN-------CF 290
Query: 247 INQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVY 306
IN++ I + G++A+ A +ERL L GG ++FD LG L+
Sbjct: 291 INRQLIYNYPEQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIE 350
Query: 307 EYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGA 366
E +GE+K + T++++G + L + + ++ D L + + D V G
Sbjct: 351 EVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGG 410
Query: 367 GAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHS 426
G E+ MA A+ + G+ + ++++A AL ++P ++A N+G+D + + +++A HS
Sbjct: 411 GCSEMLMAHAVTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHS 470
Query: 427 ESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRA 479
E G+D+ G A +G+ +++ VK+Q+L S A IL VD I++A
Sbjct: 471 EGNTTAGLDMREGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKA 523
>gi|57863259 T-complex protein 1 isoform b [Homo sapiens]
Length = 401
Score = 142 bits (357), Expect = 9e-34
Identities = 100/388 (25%), Positives = 191/388 (49%), Gaps = 31/388 (7%)
Query: 111 LRTKVHAELADVLTEAVVDSILAIKKQD------EPIDLFMIEIMEMKHKSETDTSLIRG 164
+ +K+ D VVD++LAIK D P++ + I++ +S+ ++ LI G
Sbjct: 1 MSSKIIGINGDFFANMVVDAVLAIKYTDIRGQPRYPVN--SVNILKAHGRSQMESMLISG 58
Query: 165 LVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIED 224
L+ M KR+ +A I + SL+ K ++ E+ +++ + E ++
Sbjct: 59 YALNCVVGSQGMPKRIVNAKIACLDFSLQKTKMKLGVQVVITDPEKLDQIRQRESDITKE 118
Query: 225 RVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACG 284
R++KI+ V ++ GID L + G +A+RR +R+++R+ A G
Sbjct: 119 RIQKILATGANV---------ILTTGGIDDMCLKYFVEAGAMAVRRVLKRDLKRIAKASG 169
Query: 285 GVALNSFDDLSPD------CLGHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHT 338
L++ +L + LG A V + + +++ I+ S +++++G N
Sbjct: 170 ATILSTLANLEGEETFEAAMLGQAEEVVQERICDDELILIKNTKARTSASIILRGANDFM 229
Query: 339 LTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADA 398
+++ ++ D L VK ++ VVPG GAVE A++ L + S+ R QL + FA +
Sbjct: 230 CDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALSIYLENYATSMGSREQLAIAEFARS 289
Query: 399 LLIIPKVLAQNSGFDLQETLVKIQAEHSESG--------QLVGVDLNTGEPMVAAEVGVW 450
LL+IP LA N+ D + + K++A H+E+ + +G+DL+ G+P + GV+
Sbjct: 290 LLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPERKNLKWIGLDLSNGKPRDNKQAGVF 349
Query: 451 DNYCVKKQLLHSCTVIATNILLVDEIMR 478
+ VK + L T A IL +D++++
Sbjct: 350 EPTIVKVKSLKFATEAAITILRIDDLIK 377
>gi|58331185 chaperonin containing TCP1, subunit 7 isoform b [Homo
sapiens]
Length = 339
Score = 133 bits (334), Expect = 4e-31
Identities = 83/307 (27%), Positives = 153/307 (49%), Gaps = 9/307 (2%)
Query: 178 KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVC 237
K+ + I NV LE + + N+ + E+ + +V AE + D+++KI KV
Sbjct: 26 KKYHNPKIALLNVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKV- 84
Query: 238 GDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPD 297
V+++ I + + + R +++R +ACGG S + LS D
Sbjct: 85 --------VLSKLPIGDVATQYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSAD 136
Query: 298 CLGHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAI 357
LG + E +G E++ F C ++ T +++G + + + + ++ D + V+ AI
Sbjct: 137 VLGRCQVFEETQIGGERYNFFTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAI 196
Query: 358 DDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQET 417
+ VV G GA+E+ +++ L + ++ G+ QL + A+A AL IIP+ L N+GFD
Sbjct: 197 KNDSVVAGGGAIEMELSKYLRDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNI 256
Query: 418 LVKIQAEHSESGQLVGVDLNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIM 477
L K++A H++ G GVD+N + E VW+ V+ L + + A I+ VDE +
Sbjct: 257 LNKLRARHAQGGTWYGVDINNEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETI 316
Query: 478 RAGMSSL 484
+ S++
Sbjct: 317 KNPRSTV 323
>gi|48762932 chaperonin containing TCP1, subunit 8 (theta) [Homo
sapiens]
Length = 548
Score = 129 bits (323), Expect = 8e-30
Identities = 120/514 (23%), Positives = 208/514 (40%), Gaps = 63/514 (12%)
Query: 17 QAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEM--------- 67
+ A+ NI A + L RT GP G KM+++ + +T D +L E+
Sbjct: 26 EEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFVTNDAATILRELEVQHPAAKM 85
Query: 68 ------------------------------------GLHPRIITEGFEAAKEKALQFLEE 91
GL + EG+E A KA + L
Sbjct: 86 IVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRIGLSVSEVIEGYEIACRKAHEILPN 145
Query: 92 V---KVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFMIEI 148
+ D + + + RTS+ +K + L + + + ++I ++ I +
Sbjct: 146 LVCCSAKNLRDIDEVSSLLRTSIMSKQYGNEV-FLAKLIAQACVSIFPDSGHFNVDNIRV 204
Query: 149 MEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSA 208
++ + +S++ G+V V+DA I + + TE K+A
Sbjct: 205 CKILGSGISSSSVLHGMVFKKETEGDVTS--VKDAKIAVYSCPFDGMITETKGTVLIKTA 262
Query: 209 EEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVAL 268
EE K E ++ +VK I D+ VV K D +L +K I+ +
Sbjct: 263 EELMNFSKGEENLMDAQVKAI--------ADTGANVVVTGGKVAD-MALHYANKYNIMLV 313
Query: 269 RRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKFTFIEKCNNPRSV- 327
R + ++ RL G AL + +GH VY +G+ + + ++
Sbjct: 314 RLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHCDSVYLSEVGDTQVVVFKHEKEDGAIS 373
Query: 328 TLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGR 387
T++++G + + I+ AV DG+ K D +VPG GA E+ +A+ + + + G
Sbjct: 374 TIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELAKQITSYGETCPGL 433
Query: 388 AQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVDLNTGEPMV--AA 445
Q ++ FA+A IP+ LA+NSG E + K+ A H E + VG+D+ P V
Sbjct: 434 EQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGLDIEAEVPAVKDML 493
Query: 446 EVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRA 479
E G+ D Y K + T A +L VD+I+ A
Sbjct: 494 EAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMA 527
>gi|7657253 T-complex protein 1 [Homo sapiens]
Length = 557
Score = 85.5 bits (210), Expect = 1e-16
Identities = 116/508 (22%), Positives = 195/508 (38%), Gaps = 59/508 (11%)
Query: 20 LAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMGL-HPR------ 72
L +++A + L V+R GP G K LV+ G+ T +L + L HP
Sbjct: 33 LLSSLAAVQTLASVIRPCYGPHGRQKFLVTMKGETVCTGCATAILRALELEHPAAWLLRE 92
Query: 73 -----------------IITEGFEAAKEKAL-------QFLEEVKVSREMDRETLIDVAR 108
++TE E+ L Q E + TL +A
Sbjct: 93 AGQTQAENSGDGTAFVVLLTEALLEQAEQLLKAGLPRPQLREAYATATAEVLATLPSLAI 152
Query: 109 TSLRT------KVHAEL-------ADVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKS 155
SL +H+ + D LT+ V + AIK+ D + + + +
Sbjct: 153 QSLGPLEDPSWALHSVMNTHTLSPMDHLTKLVAHACWAIKELDGSFKPERVGVCALPGGT 212
Query: 156 ETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLV 215
D+ L+ GL + G M + A + + S + +
Sbjct: 213 LEDSCLLPGLAIS-GKLCGQMATVLSGARVALFACPFGPAHPNAPATARLSSPADLAQFS 271
Query: 216 KAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAKRRN 275
K + +E +V ++ V VV+ + +D +L K GIV ++
Sbjct: 272 KGSDQLLEKQVGQLAAAGINVA-------VVLGE--VDEETLTLADKYGIVVIQARSWME 322
Query: 276 MERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKFTFIE-KCNNPRSVTLLIKGP 334
+ L+ L L P G VY LG+ E +C ++T++++G
Sbjct: 323 IIYLSEVLDTPLLPRL--LPPQRPGKCQRVYRQELGDGLAVVFEWECTGTPALTVVLRGA 380
Query: 335 NKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAEALIKHKPSVKGRAQLGVQA 394
L + AV G+ A D ++PGAGA E+A+A+ L ++G + A
Sbjct: 381 TTQGLRSAEQAVYHGIDAYFQLCQDPRLIPGAGATEMALAKMLSDKGSRLEGPSGPAFLA 440
Query: 395 FADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVDLNTGEPMVAAEVGVWDNYC 454
FA AL +PK LA+N+G + + + ++ H L+GV T + A+ GVWD
Sbjct: 441 FAWALKYLPKTLAENAGLAVSDVMAEMSGVHQGGNLLMGV--GTEGIINVAQEGVWDTLI 498
Query: 455 VKKQLLHSCTVIATNILLVDEIMRAGMS 482
VK Q + + ++ VDEI+ A S
Sbjct: 499 VKAQGFRAVAEVVLQLVTVDEIVVAKKS 526
>gi|41399285 chaperonin [Homo sapiens]
Length = 573
Score = 45.4 bits (106), Expect = 1e-04
Identities = 110/546 (20%), Positives = 217/546 (39%), Gaps = 96/546 (17%)
Query: 19 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMGLHPRIITEGF 78
A A+ + L D + +GPKG ++ G K+TKDG + + L + G
Sbjct: 36 ARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGA 95
Query: 79 EAAKEKALQFLEEVK--------VSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDS 130
+ ++ A EE ++R + +E +++ + ++ + VD+
Sbjct: 96 KLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVM-----LAVDA 150
Query: 131 ILA-IKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKK-------RVED 182
++A +KKQ +P+ EI ++ S I ++ D MKK V+D
Sbjct: 151 VIAELKKQSKPVTT-PEEIAQVATISANGDKEIGNIISDA------MKKVGRKGVITVKD 203
Query: 183 AYILTCNVSL----EYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKV-C 237
L + + ++++ ++ F S ++ + A E ++ I + +
Sbjct: 204 GKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSIQSIVPALEI 263
Query: 238 GDSDKGFVVINQKGIDPFSLDALS----KEG--IVALRRA-----KRRNMERLTLACGGV 286
++ + +VI + +D +L L K G +VA++ ++ ++ + +A GG
Sbjct: 264 ANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGA 323
Query: 287 ALN------SFDDLSPDCLGHAGLVY-----------------------------EYTLG 311
+ +D+ P LG G V + T
Sbjct: 324 VFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLKGKGDKAQIEKRIQEIIEQLDVTTS 383
Query: 312 E-EKFTFIEKCNNPRSVTLLIK--GPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGA 368
E EK E+ ++K G + + + KD V D L A + A+++G V+ G G
Sbjct: 384 EYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVL-GGGC 442
Query: 369 VEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSES 428
+ AL P+ + + ++G++ L I +A+N+G + + KI SE
Sbjct: 443 ALLRCIPALDSLTPANEDQ-KIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIMQSSSE- 500
Query: 429 GQLVGVDLNTGEPMVAAEVGVWD-NYCVKKQLLHS---CTVIATNILLVDEIMR----AG 480
VG D G+ + E G+ D V+ LL + +++ T ++V EI + G
Sbjct: 501 ---VGYDAMAGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEVVVTEIPKEEKDPG 557
Query: 481 MSSLKG 486
M ++ G
Sbjct: 558 MGAMGG 563
>gi|31542947 chaperonin [Homo sapiens]
Length = 573
Score = 45.4 bits (106), Expect = 1e-04
Identities = 110/546 (20%), Positives = 217/546 (39%), Gaps = 96/546 (17%)
Query: 19 ALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMGLHPRIITEGF 78
A A+ + L D + +GPKG ++ G K+TKDG + + L + G
Sbjct: 36 ARALMLQGVDLLADAVAVTMGPKGRTVIIEQSWGSPKVTKDGVTVAKSIDLKDKYKNIGA 95
Query: 79 EAAKEKALQFLEEVK--------VSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDS 130
+ ++ A EE ++R + +E +++ + ++ + VD+
Sbjct: 96 KLVQDVANNTNEEAGDGTTTATVLARSIAKEGFEKISKGANPVEIRRGVM-----LAVDA 150
Query: 131 ILA-IKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKK-------RVED 182
++A +KKQ +P+ EI ++ S I ++ D MKK V+D
Sbjct: 151 VIAELKKQSKPVTT-PEEIAQVATISANGDKEIGNIISDA------MKKVGRKGVITVKD 203
Query: 183 AYILTCNVSL----EYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKV-C 237
L + + ++++ ++ F S ++ + A E ++ I + +
Sbjct: 204 GKTLNDELEIIEGMKFDRGYISPYFINTSKGQKCEFQDAYVLLSEKKISSIQSIVPALEI 263
Query: 238 GDSDKGFVVINQKGIDPFSLDALS----KEG--IVALRRA-----KRRNMERLTLACGGV 286
++ + +VI + +D +L L K G +VA++ ++ ++ + +A GG
Sbjct: 264 ANAHRKPLVIIAEDVDGEALSTLVLNRLKVGLQVVAVKAPGFGDNRKNQLKDMAIATGGA 323
Query: 287 ALN------SFDDLSPDCLGHAGLVY-----------------------------EYTLG 311
+ +D+ P LG G V + T
Sbjct: 324 VFGEEGLTLNLEDVQPHDLGKVGEVIVTKDDAMLLKGKGDKAQIEKRIQEIIEQLDVTTS 383
Query: 312 E-EKFTFIEKCNNPRSVTLLIK--GPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGA 368
E EK E+ ++K G + + + KD V D L A + A+++G V+ G G
Sbjct: 384 EYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDRVTDALNATRAAVEEGIVL-GGGC 442
Query: 369 VEVAMAEALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSES 428
+ AL P+ + + ++G++ L I +A+N+G + + KI SE
Sbjct: 443 ALLRCIPALDSLTPANEDQ-KIGIEIIKRTLKIPAMTIAKNAGVEGSLIVEKIMQSSSE- 500
Query: 429 GQLVGVDLNTGEPMVAAEVGVWD-NYCVKKQLLHS---CTVIATNILLVDEIMR----AG 480
VG D G+ + E G+ D V+ LL + +++ T ++V EI + G
Sbjct: 501 ---VGYDAMAGDFVNMVEKGIIDPTKVVRTALLDAAGVASLLTTAEVVVTEIPKEEKDPG 557
Query: 481 MSSLKG 486
M ++ G
Sbjct: 558 MGAMGG 563
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 36.2 bits (82), Expect = 0.069
Identities = 38/153 (24%), Positives = 66/153 (43%), Gaps = 20/153 (13%)
Query: 82 KEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPI 141
+E+ L E E DRET +V L + E D + E+ + +KKQ +
Sbjct: 1499 REQKLTVQREQIRELEKDRETQRNVLEHQL---LELEKKDQMIESQRGQVQDLKKQLVTL 1555
Query: 142 DLFMIEIMEMKHKSETDTSLIRGLVLDHGARHP----------DMKKRVEDAYILTCNVS 191
+ +E+ E HK E LI+ L G R D+++R ++ S
Sbjct: 1556 ECLALELEENHHKMECQQKLIKEL---EGQRETQRVALTHLTLDLEERSQELQA----QS 1608
Query: 192 LEYEKTEVNSGFFYKSAEEREKLVKAERKFIED 224
+ E +S + +ER++ VK++R+ IE+
Sbjct: 1609 SQIHDLESHSTVLARELQERDQEVKSQREQIEE 1641
>gi|4503509 eukaryotic translation initiation factor 3, subunit 10
theta, 150/170kDa [Homo sapiens]
Length = 1382
Score = 34.7 bits (78), Expect = 0.20
Identities = 47/197 (23%), Positives = 81/197 (41%), Gaps = 43/197 (21%)
Query: 72 RIITEGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAEL-ADVLTEAVVDS 130
R+ E E KE+ LQ E++K ++ RE L + +T L K ++ + L E D
Sbjct: 611 RLRQEAKEREKERILQEHEQIK--KKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDF 668
Query: 131 ILA----------------IKKQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHP 174
I+A +K Q++ ID F + K + LI+ + +
Sbjct: 669 IMAKQVEQLEKEKKELQERLKNQEKKIDYFE------RAKRLEEIPLIKSAYEEQRIKDM 722
Query: 175 DMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEER----------------EKLVKAE 218
D+ ++ E+ I T + LE EK + + E+R EKL + E
Sbjct: 723 DLWEQQEEERITT--MQLEREKALEHKNRMSRMLEDRDLFVMRLKAARQSVYEEKLKQFE 780
Query: 219 RKFIEDRVKKIIELKRK 235
+ E+R ++ E KR+
Sbjct: 781 ERLAEERHNRLEERKRQ 797
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 33.9 bits (76), Expect = 0.34
Identities = 67/321 (20%), Positives = 135/321 (42%), Gaps = 47/321 (14%)
Query: 61 NVLLHEMGLHPRIITEGFEAAKEKALQFLEEVKVS------REMDRETLIDVARTSLRTK 114
N L+ E + + F A E+ Q L +VK R ++ +++A + +
Sbjct: 722 NQLIEEFKKNADNNSSAFTALSEERDQLLSQVKELSMVTELRAQVKQLEMNLAEAERQRR 781
Query: 115 VHAELA----DVLTEAVVDSILAIKKQDEPIDLFMIEIMEMKHKSETDTSLIRGL----- 165
+ E ++LTE + + K +D I++ E+ +++ + ++LIR L
Sbjct: 782 LDYESQTAHDNLLTEQIHSLSIEAKSKDVKIEVLQNELDDVQLQFSEQSTLIRSLQSQLQ 841
Query: 166 -----VLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERK 220
VL+ R + +VE+ LE K + + E+++ V+ ++
Sbjct: 842 NKESEVLEGAERVRHISSKVEELSQALSQKELEITKMD-------QLLLEKKRDVETLQQ 894
Query: 221 FIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPFSLDA---LSKEGIVALRR---AKRR 274
IE++ +++ E+ + + V +N+ + FSL KE + L R AK+
Sbjct: 895 TIEEKDQQVTEISFSM----TEKMVQLNE---EKFSLGVEIKTLKEQLNLLSRAEEAKKE 947
Query: 275 NMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKFTFIEKCNNPRSVTLLIKGP 334
+E G+ N +D++SP AG + + L + +F ++K N R L
Sbjct: 948 QVEEDNEVSSGLKQN-YDEMSP-----AGQISKEEL-QHEFDLLKKENEQRKRKLQAALI 1000
Query: 335 NKHTLTQIKDAVRDGLRAVKN 355
N+ L Q + + L +K+
Sbjct: 1001 NRKELLQRVSRLEEELANLKD 1021
>gi|151301127 dynein, axonemal, heavy chain 7 [Homo sapiens]
Length = 4024
Score = 32.7 bits (73), Expect = 0.76
Identities = 48/215 (22%), Positives = 92/215 (42%), Gaps = 44/215 (20%)
Query: 79 EAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVD----SILAI 134
+A + A +FLEE+++S E+ R+ ID+ ++ H D+ V+ + +
Sbjct: 2507 DALQAVASRFLEEIEMSEEI-RDGCIDMCKS-----FHTSTIDLSKSFFVELQRYNYVTP 2560
Query: 135 KKQDEPIDLFMI-------EIMEMK-------HKSETDTSLIRGLVLDHGARHPDMK--- 177
E I F + E+M+MK K ++ +S + + ++ A HP +K
Sbjct: 2561 TSYLELISTFKLLLEKKRSEVMKMKKRYEVGLEKLDSASSQVATMQMELEALHPQLKVAS 2620
Query: 178 KRVEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVC 237
K V++ I+ S+E KT EK+VKA+ ++ +K + C
Sbjct: 2621 KEVDEMMIMIEKESVEVAKT--------------EKIVKADETIANEQAMASKAIKDE-C 2665
Query: 238 GDSDKGFVVINQKGIDPFSLDALSKEGIVALRRAK 272
G + I + + +LD L+ + I ++ K
Sbjct: 2666 DADLAGALPILESAL--AALDTLTAQDITVVKSMK 2698
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 32.7 bits (73), Expect = 0.76
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Query: 93 KVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFM-IEIMEM 151
K+ R+++ TL A + K HA+ L E + D++ +K++ E M +EI ++
Sbjct: 1179 KMRRDLEEATLQHEATAATLRKKHADSVAELGEQI-DNLQRVKQKLEKEKSEMKMEIDDL 1237
Query: 152 KHKSETDTSL---IRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSA 208
ET + + + + ++K + E+ L +++ + + + SG F +
Sbjct: 1238 ASNVETVSKAKGNLEKMCRTLEDQLSELKSKEEEQQRLINDLTAQRGRLQTESGEFSRQL 1297
Query: 209 EEREKLVKAERKFIEDRVKKIIELKRKV 236
+E+E LV + + ++I ELKR++
Sbjct: 1298 DEKEALVSQLSRGKQAFTQQIEELKRQL 1325
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 32.7 bits (73), Expect = 0.76
Identities = 33/148 (22%), Positives = 71/148 (47%), Gaps = 5/148 (3%)
Query: 93 KVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPIDLFM-IEIMEM 151
K+ R+++ TL A + K HA+ L E + D++ +K++ E M +EI ++
Sbjct: 1179 KMRRDLEEATLQHEATAATLRKKHADSVAELGEQI-DNLQRVKQKLEKEKSEMKMEIDDL 1237
Query: 152 KHKSETDTSL---IRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYEKTEVNSGFFYKSA 208
ET + + + + ++K + E+ L +++ + + + SG F +
Sbjct: 1238 ASNVETVSKAKGNLEKMCRTLEDQLSELKSKEEEQQRLINDLTAQRGRLQTESGEFSRQL 1297
Query: 209 EEREKLVKAERKFIEDRVKKIIELKRKV 236
+E+E LV + + ++I ELKR++
Sbjct: 1298 DEKEALVSQLSRGKQAFTQQIEELKRQL 1325
>gi|70980531 GGA binding partner [Homo sapiens]
Length = 441
Score = 32.7 bits (73), Expect = 0.76
Identities = 40/174 (22%), Positives = 82/174 (47%), Gaps = 25/174 (14%)
Query: 73 IITEGFEAAKEK-ALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSI 131
++ +GF KE+ A+ F + K +E ++ L D+ + H L+ ++ E
Sbjct: 168 VLEKGFLKEKEQEAISFQDRYKELQEKHKQELEDMRKAG-----HEALSIIVDEYKALLQ 222
Query: 132 LAIKKQDEPIDLFMIEIMEMK-HKSETDTSLIRGLVLDHGARHPDM-KKRVEDAYILTCN 189
++K+Q E I+ I +E + HK E + +L+ ++ K+++++A I
Sbjct: 223 SSVKQQVEAIEKQYISAIEKQAHKCEELLNAQHQRLLEMLDTEKELLKEKIKEALI---- 278
Query: 190 VSLEYEKTEVNSGFFYKSAEE-----REKLVKA---ERKFIEDRVKKIIELKRK 235
++++ K EE +E LV A E++ ++D V K++E +RK
Sbjct: 279 -----QQSQEQKEILEKCLEEERQRNKEALVSAAKLEKEAVKDAVLKVVEEERK 327
>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
sapiens]
Length = 638
Score = 32.3 bits (72), Expect = 0.99
Identities = 30/165 (18%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 83 EKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPID 142
EK L+++EE+ + + + +D+A+ K + L +++ ++I+ + KQ E ++
Sbjct: 145 EKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLN 204
Query: 143 LFMIEIMEMKHKSETD-------------TSLIRGLVLDHGARHPDMKKRVEDAYILTCN 189
+ +++E + + + +L + +L+ R +K ++
Sbjct: 205 V-KCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQID------ 257
Query: 190 VSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKR 234
SL ++ E++S K +E++VK + F E+ + + EL +
Sbjct: 258 -SLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDK 301
>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
sapiens]
Length = 725
Score = 32.3 bits (72), Expect = 0.99
Identities = 30/165 (18%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 83 EKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPID 142
EK L+++EE+ + + + +D+A+ K + L +++ ++I+ + KQ E ++
Sbjct: 232 EKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLN 291
Query: 143 LFMIEIMEMKHKSETD-------------TSLIRGLVLDHGARHPDMKKRVEDAYILTCN 189
+ +++E + + + +L + +L+ R +K ++
Sbjct: 292 V-KCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQID------ 344
Query: 190 VSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKR 234
SL ++ E++S K +E++VK + F E+ + + EL +
Sbjct: 345 -SLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDK 388
>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
sapiens]
Length = 709
Score = 32.3 bits (72), Expect = 0.99
Identities = 30/165 (18%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 83 EKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPID 142
EK L+++EE+ + + + +D+A+ K + L +++ ++I+ + KQ E ++
Sbjct: 216 EKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLN 275
Query: 143 LFMIEIMEMKHKSETD-------------TSLIRGLVLDHGARHPDMKKRVEDAYILTCN 189
+ +++E + + + +L + +L+ R +K ++
Sbjct: 276 V-KCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQID------ 328
Query: 190 VSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKR 234
SL ++ E++S K +E++VK + F E+ + + EL +
Sbjct: 329 -SLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDK 372
>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
sapiens]
Length = 724
Score = 32.3 bits (72), Expect = 0.99
Identities = 30/165 (18%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 83 EKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIKKQDEPID 142
EK L+++EE+ + + + +D+A+ K + L +++ ++I+ + KQ E ++
Sbjct: 231 EKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLN 290
Query: 143 LFMIEIMEMKHKSETD-------------TSLIRGLVLDHGARHPDMKKRVEDAYILTCN 189
+ +++E + + + +L + +L+ R +K ++
Sbjct: 291 V-KCQLLEKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQID------ 343
Query: 190 VSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKR 234
SL ++ E++S K +E++VK + F E+ + + EL +
Sbjct: 344 -SLLQQEKELSSSLHQKLCSFQEEMVKEKNLFEEELKQTLDELDK 387
>gi|114155142 nuclear pore complex-associated protein TPR [Homo
sapiens]
Length = 2363
Score = 32.3 bits (72), Expect = 0.99
Identities = 36/151 (23%), Positives = 75/151 (49%), Gaps = 11/151 (7%)
Query: 81 AKEKALQFLEEVKVSREMDRETLIDVART-SLRTKVHAELADVLTEAVVDSILAIKKQDE 139
++E+ L+ L ++ +E+ ET +VA+ SLR + EL + + + DS+ A +++ +
Sbjct: 1192 SQEQILEILRFIRREKEI-AETRFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQ 1250
Query: 140 PIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVE-DAYILTCNV-SLEYEKT 197
M + E+ K+ET +V++ + K+R+E D + V LE +
Sbjct: 1251 VTAKTMAQHEELMKKTET-----MNVVMETNKMLREEKERLEQDLQQMQAKVRKLELDIL 1305
Query: 198 EVNSGFFYKSAEEREKLVKAERKFIEDRVKK 228
+ E+ +++AE+K +E+ VK+
Sbjct: 1306 PLQEA--NAELSEKSGMLQAEKKLLEEDVKR 1334
>gi|10863929 ribonuclease L [Homo sapiens]
Length = 741
Score = 32.0 bits (71), Expect = 1.3
Identities = 66/253 (26%), Positives = 103/253 (40%), Gaps = 42/253 (16%)
Query: 22 VNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTK---DGNVLLHEMGLHPRIITEGF 78
V + G VLR G T +L + AG +KL K ++E + T
Sbjct: 75 VELLLRHGADPVLRKKNG--ATPFILAAIAGSVKLLKLFLSKGADVNECDFYG--FTAFM 130
Query: 79 EAA---KEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK 135
EAA K KAL+FL + + + R+T D R LR L D + V+ +L I
Sbjct: 131 EAAVYGKVKALKFLYKRGANVNLRRKTKEDQER--LRKGGATALMDAAEKGHVE-VLKIL 187
Query: 136 KQDEPIDLFMIEIM-------EMKHKSETDTSLIRGLVLDHGARHPDMKKR--------- 179
+ D+ + M + ++D I L+LDHGA D+ R
Sbjct: 188 LDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGA---DVNVRGERGKTPLI 244
Query: 180 --VEDAYILTCNVSLEYEKTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVC 237
VE ++ LE E E+N ++ + L+ A +E ++KKI EL K
Sbjct: 245 LAVEKKHLGLVQRLLEQEHIEIND----TDSDGKTALLLA----VELKLKKIAELLCKRG 296
Query: 238 GDSDKGFVVINQK 250
+D G +V+ +
Sbjct: 297 ASTDCGDLVMTAR 309
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.373
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,494,482
Number of Sequences: 37866
Number of extensions: 624740
Number of successful extensions: 1802
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 1734
Number of HSP's gapped (non-prelim): 75
length of query: 486
length of database: 18,247,518
effective HSP length: 106
effective length of query: 380
effective length of database: 14,233,722
effective search space: 5408814360
effective search space used: 5408814360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.