Search of human proteins with 57863271

Search of human proteins with 57863271

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57863271 hypothetical protein LOC23078 isoform a [Homo
sapiens]
         (1905 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57863271 hypothetical protein LOC23078 isoform a [Homo sapiens]   3799   0.0  
gi|57863273 hypothetical protein LOC23078 isoform b [Homo sapiens]   2048   0.0  
gi|24415404 MDN1, midasin homolog [Homo sapiens]                       69   3e-11
gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens]          37   0.24 
gi|197276594 RNA binding motif protein 20 [Homo sapiens]               35   0.70 
gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens]      33   3.5  
gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2...    32   5.9  
gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1...    32   5.9  
gi|156938343 talin 2 [Homo sapiens]                                    32   5.9  
gi|140161500 ankyrin repeat and sterile alpha motif domain conta...    32   5.9  
gi|41322923 plectin 1 isoform 11 [Homo sapiens]                        32   5.9  
gi|41322914 plectin 1 isoform 10 [Homo sapiens]                        32   5.9  
gi|41322919 plectin 1 isoform 8 [Homo sapiens]                         32   5.9  
gi|41322910 plectin 1 isoform 7 [Homo sapiens]                         32   5.9  
gi|41322916 plectin 1 isoform 6 [Homo sapiens]                         32   5.9  
gi|41322908 plectin 1 isoform 3 [Homo sapiens]                         32   5.9  
gi|41322912 plectin 1 isoform 2 [Homo sapiens]                         32   5.9  
gi|47607492 plectin 1 isoform 1 [Homo sapiens]                         32   5.9  
gi|122937207 coiled-coil domain containing 61 [Homo sapiens]           32   5.9  
gi|41350333 beta-tubulin cofactor D [Homo sapiens]                     32   7.7  
gi|149274646 hypothetical protein LOC57710 [Homo sapiens]              32   7.7  

>gi|57863271 hypothetical protein LOC23078 isoform a [Homo sapiens]
          Length = 1905

 Score = 3799 bits (9852), Expect = 0.0
 Identities = 1905/1905 (100%), Positives = 1905/1905 (100%)

Query: 1    MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI 60
            MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI
Sbjct: 1    MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI 60

Query: 61   GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA 120
            GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA
Sbjct: 61   GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA 120

Query: 121  MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK 180
            MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK
Sbjct: 121  MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK 180

Query: 181  AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA 240
            AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA
Sbjct: 181  AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA 240

Query: 241  LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL 300
            LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL
Sbjct: 241  LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL 300

Query: 301  CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK 360
            CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK
Sbjct: 301  CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK 360

Query: 361  RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR 420
            RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR
Sbjct: 361  RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR 420

Query: 421  FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR 480
            FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR
Sbjct: 421  FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR 480

Query: 481  DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD 540
            DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD
Sbjct: 481  DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD 540

Query: 541  GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL 600
            GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL
Sbjct: 541  GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL 600

Query: 601  TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR 660
            TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR
Sbjct: 601  TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR 660

Query: 661  QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK 720
            QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK
Sbjct: 661  QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK 720

Query: 721  DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV 780
            DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV
Sbjct: 721  DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV 780

Query: 781  GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL 840
            GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL
Sbjct: 781  GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL 840

Query: 841  GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI 900
            GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI
Sbjct: 841  GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI 900

Query: 901  VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG 960
            VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG
Sbjct: 901  VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG 960

Query: 961  ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL 1020
            ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL
Sbjct: 961  ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL 1020

Query: 1021 HKYGIPIGAKPTSVQLAKELTLPEQTFMGYWTIGQARSGMQKLLCPVETHHIDIKGPALI 1080
            HKYGIPIGAKPTSVQLAKELTLPEQTFMGYWTIGQARSGMQKLLCPVETHHIDIKGPALI
Sbjct: 1021 HKYGIPIGAKPTSVQLAKELTLPEQTFMGYWTIGQARSGMQKLLCPVETHHIDIKGPALI 1080

Query: 1081 NIQEYPIERHEERSLNFTEECASWRIPLDEINIICDIATSHENEQNTLYVVTCNPASLYF 1140
            NIQEYPIERHEERSLNFTEECASWRIPLDEINIICDIATSHENEQNTLYVVTCNPASLYF
Sbjct: 1081 NIQEYPIERHEERSLNFTEECASWRIPLDEINIICDIATSHENEQNTLYVVTCNPASLYF 1140

Query: 1141 MNMTGKSGFFVDFFDIFPRTANGVWHPFVTVAPLGSPLKGQVVLHEQQSNVILLLDTTGR 1200
            MNMTGKSGFFVDFFDIFPRTANGVWHPFVTVAPLGSPLKGQVVLHEQQSNVILLLDTTGR
Sbjct: 1141 MNMTGKSGFFVDFFDIFPRTANGVWHPFVTVAPLGSPLKGQVVLHEQQSNVILLLDTTGR 1200

Query: 1201 ALHRLILPSEKFTSKKPFWWNKEEAETYKMCKEFSHKNWLVFYKEKGNSLTVLDVLEGRT 1260
            ALHRLILPSEKFTSKKPFWWNKEEAETYKMCKEFSHKNWLVFYKEKGNSLTVLDVLEGRT
Sbjct: 1201 ALHRLILPSEKFTSKKPFWWNKEEAETYKMCKEFSHKNWLVFYKEKGNSLTVLDVLEGRT 1260

Query: 1261 HTISLPINLKTVFLVAEDKWLLVESKTNQKYLLTKPAHIESEGSGVCQLYVLKEEPPSTG 1320
            HTISLPINLKTVFLVAEDKWLLVESKTNQKYLLTKPAHIESEGSGVCQLYVLKEEPPSTG
Sbjct: 1261 HTISLPINLKTVFLVAEDKWLLVESKTNQKYLLTKPAHIESEGSGVCQLYVLKEEPPSTG 1320

Query: 1321 FGVTQETEFSIPHKISSDQLSSEHLSSAVEQKIASPNRILSDEKNYATIVVGFPDLMSPS 1380
            FGVTQETEFSIPHKISSDQLSSEHLSSAVEQKIASPNRILSDEKNYATIVVGFPDLMSPS
Sbjct: 1321 FGVTQETEFSIPHKISSDQLSSEHLSSAVEQKIASPNRILSDEKNYATIVVGFPDLMSPS 1380

Query: 1381 EVYSWKRPSSLHKRSGTDTSFYRGKKKRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIY 1440
            EVYSWKRPSSLHKRSGTDTSFYRGKKKRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIY
Sbjct: 1381 EVYSWKRPSSLHKRSGTDTSFYRGKKKRGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIY 1440

Query: 1441 PKDVTPPQTSGYIEVTDLQSKKLRYIPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVV 1500
            PKDVTPPQTSGYIEVTDLQSKKLRYIPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVV
Sbjct: 1441 PKDVTPPQTSGYIEVTDLQSKKLRYIPIPRSESLSPYTTWLSTISDTDALLAEWDKSGVV 1500

Query: 1501 TVDMGGHIRLWETGLERLQRSLMEWRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDN 1560
            TVDMGGHIRLWETGLERLQRSLMEWRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDN
Sbjct: 1501 TVDMGGHIRLWETGLERLQRSLMEWRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDN 1560

Query: 1561 MPHVGGNTWAGGTGGRDTAGLGGKGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAREMGQ 1620
            MPHVGGNTWAGGTGGRDTAGLGGKGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAREMGQ
Sbjct: 1561 MPHVGGNTWAGGTGGRDTAGLGGKGGPYRLDAGHTVYQVSQAEKDAVPEEVKRAAREMGQ 1620

Query: 1621 RAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELD 1680
            RAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELD
Sbjct: 1621 RAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRIILDNLQAKGKERQWLRHQATGELD 1680

Query: 1681 DAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTME 1740
            DAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTME
Sbjct: 1681 DAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLRLVVDVSGSMYRFNRMDGRLERTME 1740

Query: 1741 AVCMVMEAFENYEEKFQYDIVGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCM 1800
            AVCMVMEAFENYEEKFQYDIVGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCM
Sbjct: 1741 AVCMVMEAFENYEEKFQYDIVGHSGDGYNIGLVPMNKIPKDNKQRLEILKTMHAHSQFCM 1800

Query: 1801 SGDHTLEGTEHAIKEIVKEEADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNAFAIF 1860
            SGDHTLEGTEHAIKEIVKEEADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNAFAIF
Sbjct: 1801 SGDHTLEGTEHAIKEIVKEEADEYFVIVLSDANLSRYGIHPAKFAQILTRDPQVNAFAIF 1860

Query: 1861 IGSLGDQATRLQRTLPAGRSFVAMDTKDIPQILQQIFTSTMLSSV 1905
            IGSLGDQATRLQRTLPAGRSFVAMDTKDIPQILQQIFTSTMLSSV
Sbjct: 1861 IGSLGDQATRLQRTLPAGRSFVAMDTKDIPQILQQIFTSTMLSSV 1905


>gi|57863273 hypothetical protein LOC23078 isoform b [Homo sapiens]
          Length = 1039

 Score = 2048 bits (5305), Expect = 0.0
 Identities = 1039/1039 (100%), Positives = 1039/1039 (100%)

Query: 1    MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI 60
            MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI
Sbjct: 1    MQSRLLLLGAPGGHGGPASRRMRLLLRQVVQRRPGGDRQRPEVRLLHAGSGADTGDTVNI 60

Query: 61   GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA 120
            GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA
Sbjct: 61   GDVSYKLKIPKNPELVPQNYISDSLAQSVVQHLRWIMQKDLLGQDVFLIGPPGPLRRSIA 120

Query: 121  MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK 180
            MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK
Sbjct: 121  MQYLELTKREVEYIALSRDTTETDLKQRREIRAGTAFYIDQCAVRAATEGRTLILEGLEK 180

Query: 181  AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA 240
            AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA
Sbjct: 181  AERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLRDHTKKELDSWKIVRVSENFRVIA 240

Query: 241  LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL 300
            LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL
Sbjct: 241  LGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKLLYSIGANVSAEKVSQLLSFATTL 300

Query: 301  CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK 360
            CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK
Sbjct: 301  CSQESSTLGLPDFPLDSLAAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLK 360

Query: 361  RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR 420
            RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR
Sbjct: 361  RFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDR 420

Query: 421  FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR 480
            FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR
Sbjct: 421  FIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTAR 480

Query: 481  DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD 540
            DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD
Sbjct: 481  DLLQQRYTLPNGDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYD 540

Query: 541  GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL 600
            GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL
Sbjct: 541  GSRLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFL 600

Query: 601  TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR 660
            TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR
Sbjct: 601  TMFFFHYMKPLVKSEEIQVIKEKVPNVPQEALDKLLSFTHKLRETQDPTAQSLAASLSTR 660

Query: 661  QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK 720
            QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK
Sbjct: 661  QLLRISRRLSQYPNENLHSAVTKACLSRFLPSLARSALEKNLADATIEINTDDNLEPELK 720

Query: 721  DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV 780
            DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV
Sbjct: 721  DYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV 780

Query: 781  GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL 840
            GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL
Sbjct: 781  GNQGVGKNKIVDRFLHLLNRPREYIQLHRDTTVQTLTLQPSVKDGLIVYEDSPLVKAVKL 840

Query: 841  GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI 900
            GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI
Sbjct: 841  GHILVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMI 900

Query: 901  VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG 960
            VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG
Sbjct: 901  VLANRPGFPFLGNDFFGTLGDIFSCHAVDNPKPHSELEMLRQYGPNVPEPILQKLVAAFG 960

Query: 961  ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL 1020
            ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL
Sbjct: 961  ELRSLADQGIINYPYSTREVVNIVKHLQKFPTEGLSSVVRNVFDFDSYNNDMREILINTL 1020

Query: 1021 HKYGIPIGAKPTSVQLAKE 1039
            HKYGIPIGAKPTSVQLAKE
Sbjct: 1021 HKYGIPIGAKPTSVQLAKE 1039


>gi|24415404 MDN1, midasin homolog [Homo sapiens]
          Length = 5596

 Score = 69.3 bits (168), Expect = 3e-11
 Identities = 152/746 (20%), Positives = 291/746 (39%), Gaps = 98/746 (13%)

Query: 158  YIDQCAVRAATEGRTLILEGLEKAERNVLPVLNNLLENREMQLEDGRFLMSAERYDKLLR 217
            +++    +A  +G  ++L+ +  A   +L  L+ LLE     L              +L 
Sbjct: 818  FVEGTLAQAVKKGEWILLDEINLAAPEILECLSGLLEGSSGSL--------------VLL 863

Query: 218  DHTKKELDSWKIVRVSENFRVIALGLPVPRYSGNPLDPPLRSRFQARDIYYLPFKDQLKL 277
            D      D+  +VR   +FR+ A   P        L P +R+RF    +  L  K+ L++
Sbjct: 864  DRG----DTEPLVR-HPDFRLFACMNPATDVGKRNLPPGIRNRFTELYVEELESKEDLQV 918

Query: 278  L---YSIGANVSAEKVSQLLSFATTLCSQESSTL-----GLPDFPLDSLAAAVQILDSFP 329
            L   Y  G +V+   V  +++F T L  +  + L       P + L +L  A++   S P
Sbjct: 919  LIVDYLKGLSVNKNTVQGIINFYTALRKESGTKLVDGTGHRPHYSLRTLCRALRFAASNP 978

Query: 330  MMPIKHAIQWLYPYSIL--LGHEGKMAVEGVLKRFELQDSGSSLLPKEIVKVEKMMENHV 387
               I+ ++   +    L  L       V+ ++ +  +  +  SLL + I   E      +
Sbjct: 979  CGNIQRSLYEGFCLGFLTQLDRASHPIVQKLICQHIVPGNVKSLLKQPI--PEPKGGRLI 1036

Query: 388  SQASVTIRIADKEVTIKVPAGTRLLSQPCASDRFIQTLSHKQLQAEMMQ--SHMVKDICL 445
                  I + DKE TI               + +I T S K    ++++  S     + +
Sbjct: 1037 QVEGYWIAVGDKEPTI--------------DETYILTSSVKLNLRDIVRVVSAGTYPVLI 1082

Query: 446  IGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTARDLLQQRYTLPNGDTAWRSSPLVNAA 505
             G    GKT + +  A   G +   I  ++    ++ +    +  +G   ++   L++A 
Sbjct: 1083 QGETSVGKTSLIQWLAAATGNHCVRINNHEHTDIQEYIGCYTSDSSGKLVFKEGVLIDAM 1142

Query: 506  LEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKEELQLSDEQLQ 565
             +G  ++LD ++      L  L RL+ D                      EL +++ Q  
Sbjct: 1143 RKGYWIILDELNLAPTDVLEALNRLLDD--------------------NRELLVTETQ-- 1180

Query: 566  KRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKSEEIQVIKEKVP 625
               +   HP F + A   PP +     + L   F   F   +   L  S E++ I  K  
Sbjct: 1181 --EVVKAHPRFMLFATQNPPGLYG-GRKVLSRAFRNRFVELHFDEL-PSSELETILHKRC 1236

Query: 626  NVPQEALDKLLSFTHKLRETQDPTA--QSLAASLSTRQLLRISRRLS-QYPNENLHSAVT 682
            ++P     KL+     L+  +  ++        ++ R L R + R     P E  +  + 
Sbjct: 1237 SLPPSYCSKLVKVMLDLQSYRRSSSVFAGKQGFITLRDLFRWAERYRLAEPTEKEYDWLQ 1296

Query: 683  KACLSRF--LPSLARSALEKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPI 740
                  +  L    R   E ++    +E +    L P+    K  V      +G +S  I
Sbjct: 1297 HLANDGYMLLAGRVRKQEEIDVIQEVLEKHFKKKLCPQSLFSKENVLK---LLGKLSTQI 1353

Query: 741  YNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNR 800
                 +     +++ + ++ + ++     +F  GE +LLVG+ G GK  I   F  L N+
Sbjct: 1354 STL--ECNFGHIVWTEGMRRLAMLVGRALEF--GEPVLLVGDTGCGKTTICQVFAALANQ 1409

Query: 801  PREYI--QLHRDTT-----VQTLTLQPSVKD-----GLIVYEDSPLVKAVKLGHILVVDE 848
                +   LH +T+     ++ +  +P+ K+      L  + D PLV+A+K     ++DE
Sbjct: 1410 KLYSVSCHLHMETSDFLGGLRPVRQKPNDKEEIDTSRLFEWHDGPLVQAMKEDGFFLLDE 1469

Query: 849  ADKAPTNVTCILKTLVE-NGEMILAD 873
               A  +V   L +++E    ++LA+
Sbjct: 1470 ISLADDSVLERLNSVLEVEKSLVLAE 1495



 Score = 64.7 bits (156), Expect = 8e-10
 Identities = 154/775 (19%), Positives = 276/775 (35%), Gaps = 141/775 (18%)

Query: 153  AGTAFYIDQCAVRAATEGRTLILEGLEKAERNVLPVLNNLLENREMQLEDGRFLMSAERY 212
            +G   + +   + A  +G  +IL+ L  A  +VL  LN LL+       D R L+  E  
Sbjct: 1128 SGKLVFKEGVLIDAMRKGYWIILDELNLAPTDVLEALNRLLD-------DNRELLVTETQ 1180

Query: 213  DKLLRDHTKKELDSWKIVRVSENFRVIALGLPVPRYSGNP-LDPPLRSRFQARDIYYLPF 271
            +               +V+    F + A   P   Y G   L    R+RF       LP 
Sbjct: 1181 E---------------VVKAHPRFMLFATQNPPGLYGGRKVLSRAFRNRFVELHFDELP- 1224

Query: 272  KDQLKLLYSIGANVSAEKVSQLLSFATTLCS-QESSTLGLPDFPLDSLAAAVQILDSFPM 330
              +L+ +     ++     S+L+     L S + SS++        +L    +  + + +
Sbjct: 1225 SSELETILHKRCSLPPSYCSKLVKVMLDLQSYRRSSSVFAGKQGFITLRDLFRWAERYRL 1284

Query: 331  M-PIKHAIQWLYPYSILLGHEGKMAVEGVLKRFELQDSGSSLLPKEIVKVEKMMENHVSQ 389
              P +    WL      L ++G M + G +++ E           EI  +++++E H  +
Sbjct: 1285 AEPTEKEYDWLQH----LANDGYMLLAGRVRKQE-----------EIDVIQEVLEKHFKK 1329

Query: 390  ASVTIRIADKEVTIKV--PAGTRLLSQPCASDRFIQTLSHKQLQAEMMQS-HMVKDICLI 446
                  +  KE  +K+     T++ +  C     + T   ++L   + ++    + + L+
Sbjct: 1330 KLCPQSLFSKENVLKLLGKLSTQISTLECNFGHIVWTEGMRRLAMLVGRALEFGEPVLLV 1389

Query: 447  GGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTARDLL-------QQRYTLPNGDTA---- 495
            G  GCGKT I + FA      +  +  +  M   D L       Q+       DT+    
Sbjct: 1390 GDTGCGKTTICQVFAALANQKLYSVSCHLHMETSDFLGGLRPVRQKPNDKEEIDTSRLFE 1449

Query: 496  WRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYDGSRLLREDRYMRLKE 555
            W   PLV A  E    LLD                    E+SL D S L R +  + +++
Sbjct: 1450 WHDGPLVQAMKEDGFFLLD--------------------EISLADDSVLERLNSVLEVEK 1489

Query: 556  ELQLS-----DEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFLTMFFFHYMKP 610
             L L+     +++  +  +      FRI+A   P   G    + L P     F   +   
Sbjct: 1490 SLVLAEKGSPEDKDSEIELLTAGKKFRILATMNPG--GDFGKKELSPALRNRFTEIWCPQ 1547

Query: 611  LVKSEE-IQVIKE-------------KVPNVPQEALDKLLSFTHKLRETQDPTAQSLAAS 656
                E+ IQ+I               K  ++P+  LD +   TH  +E       S+   
Sbjct: 1548 STSREDLIQIISHNLRPGLCLGRIDPKGSDIPEVMLDFIDWLTH--QEFGRKCVVSIRDI 1605

Query: 657  LSTRQLLRISRRLSQYPNENLHSAVTK----ACLSRFLPSLARSALEKNLADATIEINTD 712
            LS    +      +      + S VT     ACL  ++  +           A +     
Sbjct: 1606 LSWVNFMNKMGEEAALKRPEIISTVTSFVHAACLV-YIDGIGSGVTSSGFGTALL----- 1659

Query: 713  DNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHV---------IV 763
                 E   +  +  +  +R+          +++MK  +    DN+  +         ++
Sbjct: 1660 --ARKECLKFLIKRLAKIVRLTEYQKNELKIYDRMKAKEFTGIDNLWGIHPFFIPRGPVL 1717

Query: 764  MEDMLKDFLLG------------------EHLLLVGNQGVGKNKIVDRFLHLLNRPREYI 805
              + + D+ L                   + +LL G+ GVGK  +V             I
Sbjct: 1718 HRNNIADYALSAGTTAMNAQRLLRATKLKKPILLEGSPGVGKTSLVGALAKASGNTLVRI 1777

Query: 806  QLHRDTTVQTL----TLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNV 856
             L   T +  L          K G   + D PL+ A+K GH +V+DE + A  +V
Sbjct: 1778 NLSEQTDITDLFGADLPVEGGKGGEFAWRDGPLLAALKAGHWVVLDELNLASQSV 1832



 Score = 62.4 bits (150), Expect = 4e-09
 Identities = 116/544 (21%), Positives = 201/544 (36%), Gaps = 69/544 (12%)

Query: 435  MQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTARDLLQQRYTLPNGDT 494
            +  H+ K      GK     ++ K   +  G  +        MT   LL           
Sbjct: 767  LMQHVHKSAVNKDGKDSETGLLIKEKWEAFGLRLNHAQQQMKMTENTLL----------F 816

Query: 495  AWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYDGSRLLREDRYMRLK 554
            A+    L  A  +G+ +LLD I+      L  L  L+         GS +L         
Sbjct: 817  AFVEGTLAQAVKKGEWILLDEINLAAPEILECLSGLLEGSS-----GSLVL--------- 862

Query: 555  EELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGSTAHQWLGPEFLTMFFFHYMKPLVKS 614
              L   D +   R     HP FR+ A   P        + L P     F   Y++ L   
Sbjct: 863  --LDRGDTEPLVR-----HPDFRLFACMNPAT--DVGKRNLPPGIRNRFTELYVEELESK 913

Query: 615  EEIQVIKE---KVPNVPQEALDKLLSFTHKLRE---TQDPTAQSLAASLSTRQLLRISRR 668
            E++QV+     K  +V +  +  +++F   LR+   T+           S R L R  R 
Sbjct: 914  EDLQVLIVDYLKGLSVNKNTVQGIINFYTALRKESGTKLVDGTGHRPHYSLRTLCRALRF 973

Query: 669  LSQYPNENLHSAVTKACLSRFLPSLARSA---LEKNLADATIEINTDDNLEPELKDYKCE 725
             +  P  N+  ++ +     FL  L R++   ++K +    +  N    L+  + + K  
Sbjct: 974  AASNPCGNIQRSLYEGFCLGFLTQLDRASHPIVQKLICQHIVPGNVKSLLKQPIPEPKGG 1033

Query: 726  VTSGTLRIGAVSAPIYNAHEKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLV-GNQG 784
                  R+  V        +K    D  +       + + D+++    G + +L+ G   
Sbjct: 1034 ------RLIQVEGYWIAVGDKEPTIDETYILTSSVKLNLRDIVRVVSAGTYPVLIQGETS 1087

Query: 785  VGKNKIVDRFLHLLNRPREYIQLHRDTTVQT-LTLQPSVKDGLIVYEDSPLVKAVKLGHI 843
            VGK  ++             I  H  T +Q  +    S   G +V+++  L+ A++ G+ 
Sbjct: 1088 VGKTSLIQWLAAATGNHCVRINNHEHTDIQEYIGCYTSDSSGKLVFKEGVLIDAMRKGYW 1147

Query: 844  LVVDEADKAPTNVTCILKTLVENGEMILADGRRIVANSANVNGRENVVVIHPDFRMIVLA 903
            +++DE + APT+V   L  L+++   +L            V   + VV  HP F +    
Sbjct: 1148 IILDELNLAPTDVLEALNRLLDDNRELL------------VTETQEVVKAHPRFMLFATQ 1195

Query: 904  NRPGFPFLGNDFFGTLGDIFSCHAVD---NPKPHSELEMLRQYGPNVPEPILQKLVAAFG 960
            N PG  + G      L   F    V+   +  P SELE +     ++P     KLV    
Sbjct: 1196 NPPGL-YGGRK---VLSRAFRNRFVELHFDELPSSELETILHKRCSLPPSYCSKLVKVML 1251

Query: 961  ELRS 964
            +L+S
Sbjct: 1252 DLQS 1255



 Score = 46.6 bits (109), Expect = 2e-04
 Identities = 102/492 (20%), Positives = 176/492 (35%), Gaps = 102/492 (20%)

Query: 103  GQDVFLIGPPGPLRRSIAMQYLELTKREVEYIALSRDTTETDL-----------KQRREI 151
            G+ V L+G  G  + +I   +  L  +++  ++       +D              + EI
Sbjct: 1383 GEPVLLVGDTGCGKTTICQVFAALANQKLYSVSCHLHMETSDFLGGLRPVRQKPNDKEEI 1442

Query: 152  RAGTAF-YIDQCAVRAATEGRTLILEGLEKAERNVLPVLNNLLENREMQLEDGRFLMSAE 210
                 F + D   V+A  E    +L+ +  A+ +VL  LN++LE  +        L+ AE
Sbjct: 1443 DTSRLFEWHDGPLVQAMKEDGFFLLDEISLADDSVLERLNSVLEVEKS-------LVLAE 1495

Query: 211  RYDKLLRDHTKKELDSWKIVRVSENFRVIALGLPVPRYSGNPLDPPLRSRFQARDIYYLP 270
            +     +D         +++   + FR++A   P   +    L P LR+RF      + P
Sbjct: 1496 KGSPEDKD------SEIELLTAGKKFRILATMNPGGDFGKKELSPALRNRFTE---IWCP 1546

Query: 271  FKDQLKLLYSIGANVSAEKVSQLLS--FATTLCSQESSTLG--LPDFPLDSLAAAV-QIL 325
                         + S E + Q++S      LC       G  +P+  LD +     Q  
Sbjct: 1547 ------------QSTSREDLIQIISHNLRPGLCLGRIDPKGSDIPEVMLDFIDWLTHQEF 1594

Query: 326  DSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLKRFELQDS------------------ 367
                ++ I+  + W+           KM  E  LKR E+  +                  
Sbjct: 1595 GRKCVVSIRDILSWV-------NFMNKMGEEAALKRPEIISTVTSFVHAACLVYIDGIGS 1647

Query: 368  -------GSSLLP---------KEIVKVEKMMENHVSQASVTIRIADKEVT--------- 402
                   G++LL          K + K+ ++ E   ++  +  R+  KE T         
Sbjct: 1648 GVTSSGFGTALLARKECLKFLIKRLAKIVRLTEYQKNELKIYDRMKAKEFTGIDNLWGIH 1707

Query: 403  -IKVPAGTRLLSQPCASDRFIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFA 461
               +P G  L     A        +    Q  +  + + K I L G  G GKT +    A
Sbjct: 1708 PFFIPRGPVLHRNNIADYALSAGTTAMNAQRLLRATKLKKPILLEGSPGVGKTSLVGALA 1767

Query: 462  DTLGYNIEPIMLYQDMTARDLLQQRYTLPNG---DTAWRSSPLVNAALEGKLVLLDGIHR 518
               G  +  I L +     DL      +  G   + AWR  PL+ A   G  V+LD    
Sbjct: 1768 KASGNTLVRINLSEQTDITDLFGADLPVEGGKGGEFAWRDGPLLAALKAGHWVVLD---E 1824

Query: 519  VNAGTLAVLQRL 530
            +N  + +VL+ L
Sbjct: 1825 LNLASQSVLEGL 1836



 Score = 43.9 bits (102), Expect = 0.002
 Identities = 29/101 (28%), Positives = 51/101 (50%), Gaps = 6/101 (5%)

Query: 777 LLLVGNQGVGKNKIVDRFLHLLNRPRE----YIQLHRDTTVQTLTLQPSVKD--GLIVYE 830
           +LL G  G GK  +V+    +  R +      +QL   T  + L       D  G  V++
Sbjct: 325 VLLEGPIGCGKTSLVEYLAAVTGRTKPPQLLKVQLGDQTDSKMLLGMYRCTDVPGEFVWQ 384

Query: 831 DSPLVKAVKLGHILVVDEADKAPTNVTCILKTLVENGEMIL 871
              L +A  +GH +++++ D AP +V  +L  L+ENGE+++
Sbjct: 385 PGTLTQAATMGHWILLEDIDYAPLDVVSVLIPLLENGELLI 425



 Score = 40.8 bits (94), Expect = 0.013
 Identities = 84/436 (19%), Positives = 149/436 (34%), Gaps = 80/436 (18%)

Query: 428 KQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIML---YQDMTARDLLQ 484
           K LQ   M       + L G  GCGKT + +  A   G    P +L     D T   +L 
Sbjct: 310 KSLQTLAMAVASQNAVLLEGPIGCGKTSLVEYLAAVTGRTKPPQLLKVQLGDQTDSKMLL 369

Query: 485 QRYTLPN--GDTAWRSSPLVNAALEGKLVLLDGIHRVNAGTLAVLQRLIHDRELSLYDGS 542
             Y   +  G+  W+   L  AA  G  +LL+ I       ++VL  L+ + EL +    
Sbjct: 370 GMYRCTDVPGEFVWQPGTLTQAATMGHWILLEDIDYAPLDVVSVLIPLLENGELLIPGRG 429

Query: 543 RLLREDRYMRLKEELQLSDEQLQKRSIFPIHPSFRIIALAEPPVIGS------TAHQWLG 596
             L+                         + P F+  A       G        +H  L 
Sbjct: 430 DCLK-------------------------VAPGFQFFATRRLLSCGGNWYRPLNSHATLL 464

Query: 597 PEFLTMFFFHYMKPLVKSEEIQVIKEKVPN---VPQEALDKLLSFT-------------- 639
            ++ T     ++  L K E  +V++ + P+   V    LD  +  T              
Sbjct: 465 DKYWTKI---HLDNLDKRELNEVLQSRYPSLLAVVDHLLDIYIQLTGEKHHSWSDSSVGC 521

Query: 640 --------HKLRETQDPTAQSLAASLSTRQLLRISRRLSQYPNENLHSA---VTKACLSR 688
                      RE + PT +     LS R LL    R++   + +  SA   + +  L  
Sbjct: 522 EQAPEEVSEARRENKRPTLE--GRELSLRDLLNWCNRIAHSFDSSSLSASLNIFQEALDC 579

Query: 689 FLPSLARSALEKNLADATIEINTDDNLEPELKDYKCEVTSGTLRIGAVSAPIYNAHEKMK 748
           F   L+    +  +A+    I +  N+  +  ++ C++    + I  +   +       K
Sbjct: 580 FTAMLSEHTSKLKMAEV---IGSKLNISRKKAEFFCQLYKPEIVINELDLQVGRVRLLRK 636

Query: 749 VPDVL--------FYDNIQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNR 800
             + +        F       +++E +      GE +LLVG  G GK   +    H+   
Sbjct: 637 QSEAVHLQREKFTFAATRPSSVLIEQLAVCVSKGEPVLLVGETGTGKTSTIQYLAHITGH 696

Query: 801 PREYIQLHRDTTVQTL 816
               + +++ +    L
Sbjct: 697 RLRVVNMNQQSDTADL 712


>gi|33350932 cytoplasmic dynein 1 heavy chain 1 [Homo sapiens]
          Length = 4646

 Score = 36.6 bits (83), Expect = 0.24
 Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 26/133 (19%)

Query: 745  EKMKVPDVLFYDNIQHVIVMEDMLKDFLLGEHLLLVGNQGVGKNKIVDRFLHLLNRPREY 804
            E++ VP VLF + + HV+ ++ + +      HLLL+G  G GK  +  RF+  +N    Y
Sbjct: 2903 EELDVPLVLFNEVLDHVLRIDRIFRQ--PQGHLLLIGVSGAGKTTL-SRFVAWMNGLSVY 2959

Query: 805  -IQLHR-------DTTVQTLTLQPSVKDGLIVYEDSPLVKAVKLGHILVVDEADKAPTNV 856
             I++HR       D  ++T+  +   K+  I +               ++DE++   +  
Sbjct: 2960 QIKVHRKYTGEDFDEDLRTVLRRSGCKNEKIAF---------------IMDESNVLDSGF 3004

Query: 857  TCILKTLVENGEM 869
               + TL+ NGE+
Sbjct: 3005 LERMNTLLANGEV 3017


>gi|197276594 RNA binding motif protein 20 [Homo sapiens]
          Length = 1227

 Score = 35.0 bits (79), Expect = 0.70
 Identities = 24/101 (23%), Positives = 42/101 (41%), Gaps = 3/101 (2%)

Query: 1375 DLMSPSEVYSWKRPSSLHKRSGTDTSFYRGKKKRGTPKQSNCVTLLDTNQVVRILPPGEV 1434
            D+     V     P    +R+   + F    K RGTP+   C     +    +  PP E 
Sbjct: 1036 DVHPAPTVQQMSSPKPAEERARQPSPFVDDCKTRGTPEDGACE---GSPLEEKASPPIET 1092

Query: 1435 PLKDIYPKDVTPPQTSGYIEVTDLQSKKLRYIPIPRSESLS 1475
             L++   ++V  P+ S Y+E+  L+ +   Y  +   + LS
Sbjct: 1093 DLQNQACQEVLTPENSRYVEMKSLEVRSPEYTEVELKQPLS 1133


>gi|31377644 ATPase family, AAA domain containing 1 [Homo sapiens]
          Length = 361

 Score = 32.7 bits (73), Expect = 3.5
 Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 4/117 (3%)

Query: 360 KRFELQDSGSSLLPKEIVKVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASD 419
           ++ E Q     L+ +  VK  K+ E  +S A+  +   +  VT    AG   +      D
Sbjct: 47  QKVEAQKQAEKLMKQIGVKNVKLSEYEMSIAAHLVDPLNMHVTWSDIAGLDDVITDL-KD 105

Query: 420 RFIQTLSHKQLQAEMMQSHMVKDICLIGGKGCGKTVIAKNFADTLG---YNIEPIML 473
             I  +  K L          K + L G  GCGKT+IAK  A   G    N++P  L
Sbjct: 106 TVILPIKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCRFINLQPSTL 162


>gi|167830436 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 2
            [Homo sapiens]
          Length = 994

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 1565 GGNTWAGGTGGRDTAGLGGKGGPYRLDAGHTV---YQVSQAEKDAVPEEVKRAAREMGQR 1621
            GGN  +GG GG    G GG+G       G  +   Y   Q +K+   E  +RA   M +R
Sbjct: 31   GGNRGSGGGGGGGGGGRGGRGRHPGHLKGREIGMWYAKKQGQKNKEAERQERAVVHMDER 90

Query: 1622 AFQQ 1625
              +Q
Sbjct: 91   REEQ 94


>gi|167830433 DEAH (Asp-Glu-Ala-His) box polypeptide 36 isoform 1
            [Homo sapiens]
          Length = 1008

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 3/64 (4%)

Query: 1565 GGNTWAGGTGGRDTAGLGGKGGPYRLDAGHTV---YQVSQAEKDAVPEEVKRAAREMGQR 1621
            GGN  +GG GG    G GG+G       G  +   Y   Q +K+   E  +RA   M +R
Sbjct: 31   GGNRGSGGGGGGGGGGRGGRGRHPGHLKGREIGMWYAKKQGQKNKEAERQERAVVHMDER 90

Query: 1622 AFQQ 1625
              +Q
Sbjct: 91   REEQ 94


>gi|156938343 talin 2 [Homo sapiens]
          Length = 2542

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 24/95 (25%), Positives = 37/95 (38%), Gaps = 6/95 (6%)

Query: 1581 LGGKGGPYRLDAGHTVYQVSQAEKDAVPEE----VKRAAREMGQRA--FQQRLKEIQMSE 1634
            LGG       D GH  +Q   A   A PEE    ++   +++G       Q+   +Q+  
Sbjct: 1883 LGGLASQMTSDYGHLAFQGQMAAATAEPEEIGFQIRTRVQDLGHGCIFLVQKAGALQVCP 1942

Query: 1635 YDAATYERFSGAVRRQVHSLRIILDNLQAKGKERQ 1669
             D+ T        R     + ++L  LQA  K  Q
Sbjct: 1943 TDSYTKRELIECARAVTEKVSLVLSALQAGNKGTQ 1977


>gi|140161500 ankyrin repeat and sterile alpha motif domain containing
            1 [Homo sapiens]
          Length = 1134

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 5/77 (6%)

Query: 1470 RSESLSPYTTWLSTISDTDALLAEWDKSGVVTVDMGGHIRLWE-----TGLERLQRSLME 1524
            RSESLS  +     +  + +  +EWD+   +   +G  I   +     +GL  L++S+ E
Sbjct: 644  RSESLSNCSIGKKRLEKSPSFASEWDEIEKIMSSIGEGIDFSQERQKISGLRTLEQSVGE 703

Query: 1525 WRNMIGQDDRNMQITIN 1541
            W   IG      ++ +N
Sbjct: 704  WLESIGLQQYESKLLLN 720


>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
          Length = 4547

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 1598 QVSQAEKDAVP-EEVKRAAREMGQRAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRI 1656
            +V + E+ AV  ++ KR+ +E  Q+  Q    EIQ     A   ER    +  ++  +R 
Sbjct: 1400 EVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR- 1458

Query: 1657 ILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLR 1716
                LQ +  ERQ  R  A GEL            +A+  R  E E Q    Q++ +RLR
Sbjct: 1459 ----LQLEATERQ--RGGAEGEL------------QALRARAEEAEAQKRQAQEEAERLR 1500

Query: 1717 LVVDVSGSMYRFNRMD--GRLERTMEAVCMVMEAFENYEE 1754
              V       R   ++   R++   EA      A +  EE
Sbjct: 1501 RQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEE 1540


>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
          Length = 4551

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 1598 QVSQAEKDAVP-EEVKRAAREMGQRAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRI 1656
            +V + E+ AV  ++ KR+ +E  Q+  Q    EIQ     A   ER    +  ++  +R 
Sbjct: 1404 EVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR- 1462

Query: 1657 ILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLR 1716
                LQ +  ERQ  R  A GEL            +A+  R  E E Q    Q++ +RLR
Sbjct: 1463 ----LQLEATERQ--RGGAEGEL------------QALRARAEEAEAQKRQAQEEAERLR 1504

Query: 1717 LVVDVSGSMYRFNRMD--GRLERTMEAVCMVMEAFENYEE 1754
              V       R   ++   R++   EA      A +  EE
Sbjct: 1505 RQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEE 1544


>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
          Length = 4547

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 1598 QVSQAEKDAVP-EEVKRAAREMGQRAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRI 1656
            +V + E+ AV  ++ KR+ +E  Q+  Q    EIQ     A   ER    +  ++  +R 
Sbjct: 1400 EVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR- 1458

Query: 1657 ILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLR 1716
                LQ +  ERQ  R  A GEL            +A+  R  E E Q    Q++ +RLR
Sbjct: 1459 ----LQLEATERQ--RGGAEGEL------------QALRARAEEAEAQKRQAQEEAERLR 1500

Query: 1717 LVVDVSGSMYRFNRMD--GRLERTMEAVCMVMEAFENYEE 1754
              V       R   ++   R++   EA      A +  EE
Sbjct: 1501 RQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEE 1540


>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
          Length = 4515

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 1598 QVSQAEKDAVP-EEVKRAAREMGQRAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRI 1656
            +V + E+ AV  ++ KR+ +E  Q+  Q    EIQ     A   ER    +  ++  +R 
Sbjct: 1368 EVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR- 1426

Query: 1657 ILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLR 1716
                LQ +  ERQ  R  A GEL            +A+  R  E E Q    Q++ +RLR
Sbjct: 1427 ----LQLEATERQ--RGGAEGEL------------QALRARAEEAEAQKRQAQEEAERLR 1468

Query: 1717 LVVDVSGSMYRFNRMD--GRLERTMEAVCMVMEAFENYEE 1754
              V       R   ++   R++   EA      A +  EE
Sbjct: 1469 RQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEE 1508


>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
          Length = 4684

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 1598 QVSQAEKDAVP-EEVKRAAREMGQRAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRI 1656
            +V + E+ AV  ++ KR+ +E  Q+  Q    EIQ     A   ER    +  ++  +R 
Sbjct: 1537 EVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR- 1595

Query: 1657 ILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLR 1716
                LQ +  ERQ  R  A GEL            +A+  R  E E Q    Q++ +RLR
Sbjct: 1596 ----LQLEATERQ--RGGAEGEL------------QALRARAEEAEAQKRQAQEEAERLR 1637

Query: 1717 LVVDVSGSMYRFNRMD--GRLERTMEAVCMVMEAFENYEE 1754
              V       R   ++   R++   EA      A +  EE
Sbjct: 1638 RQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEE 1677


>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
          Length = 4525

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 1598 QVSQAEKDAVP-EEVKRAAREMGQRAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRI 1656
            +V + E+ AV  ++ KR+ +E  Q+  Q    EIQ     A   ER    +  ++  +R 
Sbjct: 1378 EVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR- 1436

Query: 1657 ILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLR 1716
                LQ +  ERQ  R  A GEL            +A+  R  E E Q    Q++ +RLR
Sbjct: 1437 ----LQLEATERQ--RGGAEGEL------------QALRARAEEAEAQKRQAQEEAERLR 1478

Query: 1717 LVVDVSGSMYRFNRMD--GRLERTMEAVCMVMEAFENYEE 1754
              V       R   ++   R++   EA      A +  EE
Sbjct: 1479 RQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEE 1518


>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
          Length = 4533

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 1598 QVSQAEKDAVP-EEVKRAAREMGQRAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRI 1656
            +V + E+ AV  ++ KR+ +E  Q+  Q    EIQ     A   ER    +  ++  +R 
Sbjct: 1386 EVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR- 1444

Query: 1657 ILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLR 1716
                LQ +  ERQ  R  A GEL            +A+  R  E E Q    Q++ +RLR
Sbjct: 1445 ----LQLEATERQ--RGGAEGEL------------QALRARAEEAEAQKRQAQEEAERLR 1486

Query: 1717 LVVDVSGSMYRFNRMD--GRLERTMEAVCMVMEAFENYEE 1754
              V       R   ++   R++   EA      A +  EE
Sbjct: 1487 RQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEE 1526


>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
          Length = 4574

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 43/160 (26%), Positives = 66/160 (41%), Gaps = 22/160 (13%)

Query: 1598 QVSQAEKDAVP-EEVKRAAREMGQRAFQQRLKEIQMSEYDAATYERFSGAVRRQVHSLRI 1656
            +V + E+ AV  ++ KR+ +E  Q+  Q    EIQ     A   ER    +  ++  +R 
Sbjct: 1427 EVVRREEAAVDAQQQKRSIQEELQQLRQSSEAEIQAKARQAEAAERSRLRIEEEIRVVR- 1485

Query: 1657 ILDNLQAKGKERQWLRHQATGELDDAKIIDGLTGEKAIYKRRGELEPQLGSPQQKPKRLR 1716
                LQ +  ERQ  R  A GEL            +A+  R  E E Q    Q++ +RLR
Sbjct: 1486 ----LQLEATERQ--RGGAEGEL------------QALRARAEEAEAQKRQAQEEAERLR 1527

Query: 1717 LVVDVSGSMYRFNRMD--GRLERTMEAVCMVMEAFENYEE 1754
              V       R   ++   R++   EA      A +  EE
Sbjct: 1528 RQVQDESQRKRQAEVELASRVKAEAEAAREKQRALQALEE 1567


>gi|122937207 coiled-coil domain containing 61 [Homo sapiens]
          Length = 531

 Score = 32.0 bits (71), Expect = 5.9
 Identities = 31/128 (24%), Positives = 56/128 (43%), Gaps = 23/128 (17%)

Query: 1601 QAEKDAVPEEVKRAAREMGQRAFQQRLKEIQMSEYDAATYERFSG-AVRRQVHSLRIILD 1659
            Q  +D    E+     ++ + A ++R  E Q+     +  E  +G A R++  +LR ++ 
Sbjct: 225  QNTRDTRENEIWHLREQVSRLASEKRELEAQLGR---SREEALAGRAARQEAEALRGLVR 281

Query: 1660 NLQAKGKERQWLRHQATG-----------ELDDAKI--------IDGLTGEKAIYKRRGE 1700
             L+ + ++ + L H+  G           EL++AK         +  LT E A+YKR G 
Sbjct: 282  GLELELRQERGLGHRVAGRRGQDCRRLAKELEEAKASERSLRARLKTLTSELALYKRGGR 341

Query: 1701 LEPQLGSP 1708
                 G P
Sbjct: 342  GSRGRGRP 349


>gi|41350333 beta-tubulin cofactor D [Homo sapiens]
          Length = 1192

 Score = 31.6 bits (70), Expect = 7.7
 Identities = 59/267 (22%), Positives = 107/267 (40%), Gaps = 24/267 (8%)

Query: 261  FQARDIYYLPFKDQLKLLY--SIGANVSAEKVSQLLSFATTLCSQESSTLGLPDFPLDSL 318
            F +  I ++P + +L+ L+  S  A+V+    SQ     T L       LGLP +    L
Sbjct: 931  FDSPPIPHVPHRGELEKLFPRSDVASVNWSAPSQAFPRITQL-------LGLPTYRYHVL 983

Query: 319  AAAVQILDSFPMMPIKHAIQWLYPYSILLGHEGKMAVEGVLKRFELQDSGSSLLPKEI-V 377
               V  L       I+H+ Q L+ Y  + G +      G      LQ    +LL + + V
Sbjct: 984  LGLVVSLGGLTESTIRHSTQSLFEY--MKGIQSDPQALGSFSGTLLQIFEDNLLNERVSV 1041

Query: 378  KVEKMMENHVSQASVTIRIADKEVTIKVPAGTRLLSQPCASDRFIQTLSHKQLQAEMMQ- 436
             + K +++ ++     I   +++    V        +   S    + LS   +  EM+Q 
Sbjct: 1042 PLLKTLDHVLTHGCFDIFTTEEDHPFAVKLLALCKKEIKNSKDIQKLLSGIAVFCEMVQF 1101

Query: 437  -----SHMVKDICLIGGKGCGKTVIAKNFADTLGYNIEPIMLYQDMTARDLLQQRYTLPN 491
                    +  +CL+    C +  + +    +  Y  E ++ Y D+   D+L +  T+ +
Sbjct: 1102 PGDVRRQALLQLCLL---LCHRFPLIRKTTASQVY--ETLLTYSDVVGADVLDEVVTVLS 1156

Query: 492  GDTAWRSSPLVNAALEGKLVLLDGIHR 518
             DTAW +   V      +L  L G+ R
Sbjct: 1157 -DTAWDAELAVVREQRNRLCDLLGVPR 1182


>gi|149274646 hypothetical protein LOC57710 [Homo sapiens]
          Length = 1190

 Score = 31.6 bits (70), Expect = 7.7
 Identities = 44/186 (23%), Positives = 67/186 (36%), Gaps = 32/186 (17%)

Query: 1408 RGTPKQSNCVTLLDTNQVVRILPPGEVPLKDIYPKDVTPPQTSGYIEVTDLQSKKLRYIP 1467
            RG+P        L  +    +L P  +    I+   VTP +  G          K+ +IP
Sbjct: 182  RGSPWPPEAEWTLPDHDRGPLLGPSSLQQSPIH--GVTPGRPGG-----PGHCNKIIHIP 234

Query: 1468 IPRSESLSPYTTWLSTISDTD--------------ALLAE-WDKSGVVTVDMGGHIRLWE 1512
             PR+    P+   + T +D D              ALL E W    +  +  G  +    
Sbjct: 235  SPRTGRSYPFPDGVVTEADLDSTSLTSEEVFVPRTALLGERWRAGDLEALGAGSSVLSLS 294

Query: 1513 TGLERLQRSLMEWRNMIGQDDRNMQITINRDSGEDVSSPKHGKEDPDNMPHVGGNTWAGG 1572
              +ER +  L E  N+ GQ  R +        G    +P      P+    VG   WA G
Sbjct: 295  DRVERNRLLLQEMLNVSGQSPRKV--------GTPAWTPSWDTAAPER--PVGDVDWASG 344

Query: 1573 TGGRDT 1578
            T  +D+
Sbjct: 345  TSLQDS 350


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.135    0.396 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,123,348
Number of Sequences: 37866
Number of extensions: 3451053
Number of successful extensions: 9552
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 9452
Number of HSP's gapped (non-prelim): 87
length of query: 1905
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1788
effective length of database: 13,817,196
effective search space: 24705146448
effective search space used: 24705146448
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.