Guide to the Human Genome
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Name: KIAA0564 Sequence: fasta or formatted (1039aa) NCBI GI: 57863273
Description:

hypothetical protein LOC23078 isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {1905aa} hypothetical protein LOC23078 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.4         66           3
 C cysteine            0.9          9           1
 D aspartate           5.6         58           2
 E glutamate           6.2         64           2
 F phenylalanine       3.2         33           3
 G glycine             5.8         60           2
 H histidine           2.6         27           1
 I isoleucine          6.0         62           2
 K lysine              5.5         57           2
 L leucine            13.3        138           4
 M methionine          2.5         26           2
 N asparagine          4.1         43           2
 P proline             5.6         58           2
 Q glutamine           4.8         50           2
 R arginine            6.6         69           2
 S serine              6.3         65           2
 T threonine           4.4         46           2
 V valine              7.1         74           3
 W tryptophan          0.5          5           1
 Y tyrosine            2.8         29           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   hypothetical protein LOC23078 isoform b 
KIAA0564              1.000   hypothetical protein LOC23078 isoform a 
MDN1                  0.022   MDN1, midasin homolog 
DYNC1H1               0.006   cytoplasmic dynein 1 heavy chain 1 
DNAH6                 0.004   dynein, axonemal, heavy polypeptide 6 
ATAD1                 0.004   ATPase family, AAA domain containing 1 
TBCD                  0.003   beta-tubulin cofactor D 
LONP2                 0.003   peroxisomal LON protease-like 
BIN3                  0.003   bridging integrator 3 
VWA3A                 0.002   von Willebrand factor A domain containing 3A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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