Search of human proteins with 57634534

Search of human proteins with 57634534

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|57634534 nucleoporin 205kDa [Homo sapiens]
         (2012 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|57634534 nucleoporin 205kDa [Homo sapiens]                        3981   0.0  
gi|9955970 ATP-binding cassette, sub-family C, member 3 isoform ...    37   0.25 
gi|225545550 TEL2, telomere maintenance 2, homolog [Homo sapiens]      35   0.74 
gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      35   0.74 
gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      35   0.74 
gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]      35   0.74 
gi|221316650 ephrin receptor EphA1 [Homo sapiens]                      33   3.7  
gi|116805788 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]     33   3.7  
gi|82617634 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]      33   3.7  
gi|82617630 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]      33   3.7  
gi|217330634 serine/threonine kinase 36 [Homo sapiens]                 33   3.7  
gi|25092658 hypothetical protein LOC221927 [Homo sapiens]              33   3.7  
gi|50726952 retinol dehydrogenase 5 (11-cis and 9-cis) [Homo sap...    32   6.3  
gi|171184451 centrosome-associated protein 350 [Homo sapiens]          32   6.3  
gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]           32   8.2  
gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]           32   8.2  
gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]           32   8.2  
gi|4506057 cAMP-dependent protein kinase catalytic subunit beta ...    32   8.2  
gi|46909587 cAMP-dependent protein kinase catalytic subunit beta...    32   8.2  

>gi|57634534 nucleoporin 205kDa [Homo sapiens]
          Length = 2012

 Score = 3981 bits (10324), Expect = 0.0
 Identities = 2012/2012 (100%), Positives = 2012/2012 (100%)

Query: 1    MATPLAVNSAASLWGPYKDIWHKVGNALWRRQPEAVHLLDKILKKHKPDFISLFKNPPKN 60
            MATPLAVNSAASLWGPYKDIWHKVGNALWRRQPEAVHLLDKILKKHKPDFISLFKNPPKN
Sbjct: 1    MATPLAVNSAASLWGPYKDIWHKVGNALWRRQPEAVHLLDKILKKHKPDFISLFKNPPKN 60

Query: 61   VQQHEKVQKASTEGVAIQGQQGTRLLPEQLIKEAFILSDLFDIGELAAVELLLAGEHQQP 120
            VQQHEKVQKASTEGVAIQGQQGTRLLPEQLIKEAFILSDLFDIGELAAVELLLAGEHQQP
Sbjct: 61   VQQHEKVQKASTEGVAIQGQQGTRLLPEQLIKEAFILSDLFDIGELAAVELLLAGEHQQP 120

Query: 121  HFPGLTRGLVAVLLYWDGKRCIANSLKALIQSRRGKTWTLELSPELASMTTRFTDELMEQ 180
            HFPGLTRGLVAVLLYWDGKRCIANSLKALIQSRRGKTWTLELSPELASMTTRFTDELMEQ
Sbjct: 121  HFPGLTRGLVAVLLYWDGKRCIANSLKALIQSRRGKTWTLELSPELASMTTRFTDELMEQ 180

Query: 181  GLTYKVLTLVSQIDVNNEFEKLQRERGLGSEKHRKEVSDLIKECRQSLAESLFAWACQSP 240
            GLTYKVLTLVSQIDVNNEFEKLQRERGLGSEKHRKEVSDLIKECRQSLAESLFAWACQSP
Sbjct: 181  GLTYKVLTLVSQIDVNNEFEKLQRERGLGSEKHRKEVSDLIKECRQSLAESLFAWACQSP 240

Query: 241  LGKEDTLLLIGHLERVTVEANGSLDAVNLALLMALLYCFDISFIEQSTEERDDMIHQLPL 300
            LGKEDTLLLIGHLERVTVEANGSLDAVNLALLMALLYCFDISFIEQSTEERDDMIHQLPL
Sbjct: 241  LGKEDTLLLIGHLERVTVEANGSLDAVNLALLMALLYCFDISFIEQSTEERDDMIHQLPL 300

Query: 301  LTEKQYIATIHSRLQDSQLWKLPGLQATVRLAWALALRGISQLPDVTALAEFTEADEAMA 360
            LTEKQYIATIHSRLQDSQLWKLPGLQATVRLAWALALRGISQLPDVTALAEFTEADEAMA
Sbjct: 301  LTEKQYIATIHSRLQDSQLWKLPGLQATVRLAWALALRGISQLPDVTALAEFTEADEAMA 360

Query: 361  ELAIADNVFLFLMESVVVSEYFYQEEFYIRRVHNLITDFLALMPMKVKQLRNRADEDARM 420
            ELAIADNVFLFLMESVVVSEYFYQEEFYIRRVHNLITDFLALMPMKVKQLRNRADEDARM
Sbjct: 361  ELAIADNVFLFLMESVVVSEYFYQEEFYIRRVHNLITDFLALMPMKVKQLRNRADEDARM 420

Query: 421  IHMSMQMGNEPPISLRRDLEHLMLLIGELYKKNPFHLELALEYWCPTEPLQTPTIMGSYL 480
            IHMSMQMGNEPPISLRRDLEHLMLLIGELYKKNPFHLELALEYWCPTEPLQTPTIMGSYL
Sbjct: 421  IHMSMQMGNEPPISLRRDLEHLMLLIGELYKKNPFHLELALEYWCPTEPLQTPTIMGSYL 480

Query: 481  GVAHQRPPQRQVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNGSS 540
            GVAHQRPPQRQVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNGSS
Sbjct: 481  GVAHQRPPQRQVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNGSS 540

Query: 541  HVENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLIAF 600
            HVENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLIAF
Sbjct: 541  HVENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLIAF 600

Query: 601  LQLTSTIITWSENARLALCEHPQWTPVVVILGLLQCSIPPVLKAELLKTLAAFGKSPEIA 660
            LQLTSTIITWSENARLALCEHPQWTPVVVILGLLQCSIPPVLKAELLKTLAAFGKSPEIA
Sbjct: 601  LQLTSTIITWSENARLALCEHPQWTPVVVILGLLQCSIPPVLKAELLKTLAAFGKSPEIA 660

Query: 661  ASLWQSLEYTQILQTVRIPSQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLVESSFP 720
            ASLWQSLEYTQILQTVRIPSQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLVESSFP
Sbjct: 661  ASLWQSLEYTQILQTVRIPSQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLVESSFP 720

Query: 721  SNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQL 780
            SNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQL
Sbjct: 721  SNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQL 780

Query: 781  EDFVDQFVELQGEEIIAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDTYAPFPGKK 840
            EDFVDQFVELQGEEIIAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDTYAPFPGKK
Sbjct: 781  EDFVDQFVELQGEEIIAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDTYAPFPGKK 840

Query: 841  HLEKAVQHCLALLNLTLQKENLFMDLLRESQLALIVCPLEQLLQGINPRTKKADNVVNIA 900
            HLEKAVQHCLALLNLTLQKENLFMDLLRESQLALIVCPLEQLLQGINPRTKKADNVVNIA
Sbjct: 841  HLEKAVQHCLALLNLTLQKENLFMDLLRESQLALIVCPLEQLLQGINPRTKKADNVVNIA 900

Query: 901  RYLYHGNTNPELAFESAKILCCISCNSNIQIKLVGDFTHDQSISQKLMAGFVECLDCEDA 960
            RYLYHGNTNPELAFESAKILCCISCNSNIQIKLVGDFTHDQSISQKLMAGFVECLDCEDA
Sbjct: 901  RYLYHGNTNPELAFESAKILCCISCNSNIQIKLVGDFTHDQSISQKLMAGFVECLDCEDA 960

Query: 961  EEFVRLEEGSELEKKLVAIRHETRIHILNLLITSLECNPPNLALYLLGFELKKPVSTTNL 1020
            EEFVRLEEGSELEKKLVAIRHETRIHILNLLITSLECNPPNLALYLLGFELKKPVSTTNL
Sbjct: 961  EEFVRLEEGSELEKKLVAIRHETRIHILNLLITSLECNPPNLALYLLGFELKKPVSTTNL 1020

Query: 1021 QDPGVLGCPRTCLHAILNILEKGTEGRTGPVAVRESPQLAELCYQVIYQLCACSDTSGPT 1080
            QDPGVLGCPRTCLHAILNILEKGTEGRTGPVAVRESPQLAELCYQVIYQLCACSDTSGPT
Sbjct: 1021 QDPGVLGCPRTCLHAILNILEKGTEGRTGPVAVRESPQLAELCYQVIYQLCACSDTSGPT 1080

Query: 1081 MRYLRTSQDFLFSQLQYLPFSNKEYEISMLNQMSWLMKTASIELRVTSLNRQRSHTQRLL 1140
            MRYLRTSQDFLFSQLQYLPFSNKEYEISMLNQMSWLMKTASIELRVTSLNRQRSHTQRLL
Sbjct: 1081 MRYLRTSQDFLFSQLQYLPFSNKEYEISMLNQMSWLMKTASIELRVTSLNRQRSHTQRLL 1140

Query: 1141 HLLLDDMPVKPYSDGEGGIEDENRSVSGFLHFDTATKVRRKILNILDSIDFSQEIPEPLQ 1200
            HLLLDDMPVKPYSDGEGGIEDENRSVSGFLHFDTATKVRRKILNILDSIDFSQEIPEPLQ
Sbjct: 1141 HLLLDDMPVKPYSDGEGGIEDENRSVSGFLHFDTATKVRRKILNILDSIDFSQEIPEPLQ 1200

Query: 1201 LDFFDRAQIEQVIANCEHKNLRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEIS 1260
            LDFFDRAQIEQVIANCEHKNLRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEIS
Sbjct: 1201 LDFFDRAQIEQVIANCEHKNLRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEIS 1260

Query: 1261 TVLQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQAEDRQLIIRDILQDVHD 1320
            TVLQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQAEDRQLIIRDILQDVHD
Sbjct: 1261 TVLQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQAEDRQLIIRDILQDVHD 1320

Query: 1321 KILDDEAAQELMPVVAGAVFTLTAHLSQAVLTEQKQTSVLGPAEAHYAFMLDSCFTSPPP 1380
            KILDDEAAQELMPVVAGAVFTLTAHLSQAVLTEQKQTSVLGPAEAHYAFMLDSCFTSPPP
Sbjct: 1321 KILDDEAAQELMPVVAGAVFTLTAHLSQAVLTEQKQTSVLGPAEAHYAFMLDSCFTSPPP 1380

Query: 1381 EENPLVGFASIGDSSLYIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPDEPDT 1440
            EENPLVGFASIGDSSLYIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPDEPDT
Sbjct: 1381 EENPLVGFASIGDSSLYIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPDEPDT 1440

Query: 1441 LEAAKKTMWERLTAPEDVFSKLQRENIAIIESYGAALMEVVCRDACDGHEIGRMLALALL 1500
            LEAAKKTMWERLTAPEDVFSKLQRENIAIIESYGAALMEVVCRDACDGHEIGRMLALALL
Sbjct: 1441 LEAAKKTMWERLTAPEDVFSKLQRENIAIIESYGAALMEVVCRDACDGHEIGRMLALALL 1500

Query: 1501 DRIVSVDKQQQWLLYLSNSGYLKVLVDSLVEDDRTLQSLLTPQPPLLKALYTYESKMAFL 1560
            DRIVSVDKQQQWLLYLSNSGYLKVLVDSLVEDDRTLQSLLTPQPPLLKALYTYESKMAFL
Sbjct: 1501 DRIVSVDKQQQWLLYLSNSGYLKVLVDSLVEDDRTLQSLLTPQPPLLKALYTYESKMAFL 1560

Query: 1561 TRVAKIQQGALELLRSGVIVRLAQCQVYDMRPETDPQSMFGMRDPPMFIPTPVDRYRQIL 1620
            TRVAKIQQGALELLRSGVIVRLAQCQVYDMRPETDPQSMFGMRDPPMFIPTPVDRYRQIL
Sbjct: 1561 TRVAKIQQGALELLRSGVIVRLAQCQVYDMRPETDPQSMFGMRDPPMFIPTPVDRYRQIL 1620

Query: 1621 LPALQLCQVILTSSMAQHLQAAGQVLQFLISHSDTIQAILRCQDVSAGSLQELALLTGII 1680
            LPALQLCQVILTSSMAQHLQAAGQVLQFLISHSDTIQAILRCQDVSAGSLQELALLTGII
Sbjct: 1621 LPALQLCQVILTSSMAQHLQAAGQVLQFLISHSDTIQAILRCQDVSAGSLQELALLTGII 1680

Query: 1681 SKAALPGILSELDVDVNEGSLMELQGHIGRFQRQCLGLLSRFGGSDRLRQFKFQDDNVEG 1740
            SKAALPGILSELDVDVNEGSLMELQGHIGRFQRQCLGLLSRFGGSDRLRQFKFQDDNVEG
Sbjct: 1681 SKAALPGILSELDVDVNEGSLMELQGHIGRFQRQCLGLLSRFGGSDRLRQFKFQDDNVEG 1740

Query: 1741 DKVSKKDEIELAMQQICANVMEYCQSLMLQSSPTFQHAVCLFTPSLSETVNRDGPRQDTQ 1800
            DKVSKKDEIELAMQQICANVMEYCQSLMLQSSPTFQHAVCLFTPSLSETVNRDGPRQDTQ
Sbjct: 1741 DKVSKKDEIELAMQQICANVMEYCQSLMLQSSPTFQHAVCLFTPSLSETVNRDGPRQDTQ 1800

Query: 1801 APVVPYWRLPGLGIIIYLLKQSANDFFSYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMP 1860
            APVVPYWRLPGLGIIIYLLKQSANDFFSYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMP
Sbjct: 1801 APVVPYWRLPGLGIIIYLLKQSANDFFSYYDSHRQSVSKLQNVEQLPPDEIKELCQSVMP 1860

Query: 1861 AGVDKISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDS 1920
            AGVDKISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDS
Sbjct: 1861 AGVDKISTAQKYVLARRRLVKVINNRAKLLSLCSFIIETCLFILWRHLEYYLLHCMPTDS 1920

Query: 1921 QDSLFASRTLFKSRRLQDSFASETNLDFRSGLAIVSQHDLDQLQADAINAFGESLQKKLL 1980
            QDSLFASRTLFKSRRLQDSFASETNLDFRSGLAIVSQHDLDQLQADAINAFGESLQKKLL
Sbjct: 1921 QDSLFASRTLFKSRRLQDSFASETNLDFRSGLAIVSQHDLDQLQADAINAFGESLQKKLL 1980

Query: 1981 DIEGLYSKVRSRYSFIQALVRRIRGLLRISRN 2012
            DIEGLYSKVRSRYSFIQALVRRIRGLLRISRN
Sbjct: 1981 DIEGLYSKVRSRYSFIQALVRRIRGLLRISRN 2012


>gi|9955970 ATP-binding cassette, sub-family C, member 3 isoform 1
            [Homo sapiens]
          Length = 1527

 Score = 36.6 bits (83), Expect = 0.25
 Identities = 44/176 (25%), Positives = 78/176 (44%), Gaps = 22/176 (12%)

Query: 1547 LKALYTYESKMAFLTRVAKIQQGALELLRSGVIVRLAQCQVYDMRP------------ET 1594
            +K L  Y  + +FL +V  I+QG L+LLR+   +       +   P              
Sbjct: 498  IKVLKLYAWEPSFLKQVEGIRQGELQLLRTAAYLHTTTTFTWMCSPFLVTLITLWVYVYV 557

Query: 1595 DPQSMFGMRDPPMFIPTPVDRYRQILLPALQLCQVILTSSMAQHLQAAGQVLQFLISHSD 1654
            DP ++        F+   V  +  + LP   L Q+I  S++ Q   +  ++ QFL     
Sbjct: 558  DPNNVLDAE--KAFV--SVSLFNILRLPLNMLPQLI--SNLTQASVSLKRIQQFLSQEEL 611

Query: 1655 TIQAILRCQDVSAGSLQELALLTGIISKAA-LPGILSELDVDVNEGSLMELQGHIG 1709
              Q++ R + +S G    + + +G  + A  LP  L  LD+ V +G+L+ + G +G
Sbjct: 612  DPQSVER-KTISPG--YAITIHSGTFTWAQDLPPTLHSLDIQVPKGALVAVVGPVG 664


>gi|225545550 TEL2, telomere maintenance 2, homolog [Homo sapiens]
          Length = 837

 Score = 35.0 bits (79), Expect = 0.74
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 7/85 (8%)

Query: 804 SLMYHLLNESPMLELALSLLEE-----GVKQLDTYAPFPGKKHLEKAVQHCLALLNLTLQ 858
           SL+ HL  +S    L L +L+E     G      + P P ++H+ KAV  CLA L     
Sbjct: 317 SLLGHLAMDSQRRPLLLQVLKELLETWGSSSAIRHTPLPQQRHVSKAVLICLAQLGEPEL 376

Query: 859 KENLFMDLLRESQLALIVCPLEQLL 883
           +++   D L  S +A + C L+  L
Sbjct: 377 RDS--RDELLASMMAGVKCRLDSSL 399


>gi|239753442 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1723

 Score = 35.0 bits (79), Expect = 0.74
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 22/120 (18%)

Query: 136 WDGKRCIANSLKALIQSRRGKTWTLELSPELASMTTRFTDELMEQGLTYK---------- 185
           W+ K  +   L+  ++  RG +W+L LS EL +    F    +E+G  Y+          
Sbjct: 675 WEDK--LIQFLRNSLKKTRGSSWSLRLSKELNNQIASFDSPSLEKGFLYRALGFTLATGL 732

Query: 186 --------VLTLVSQIDVNNEF--EKLQRERGLGSEKHRKEVSDLIKECRQSLAESLFAW 235
                   +L L+ + D +N+F  E +    GL +    K V +++ +  + + ES  +W
Sbjct: 733 EASKVEVLLLELLYKTDYSNDFDSEGVIMCFGLCARGQVKTVLNVLHDFEERIQESEQSW 792


>gi|239748007 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1706

 Score = 35.0 bits (79), Expect = 0.74
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 22/120 (18%)

Query: 136 WDGKRCIANSLKALIQSRRGKTWTLELSPELASMTTRFTDELMEQGLTYK---------- 185
           W+ K  +   L+  ++  RG +W+L LS EL +    F    +E+G  Y+          
Sbjct: 672 WEDK--LIQFLRNSLKKTRGSSWSLRLSKELNNQIASFDSPSLEKGFLYRALGFTLATGL 729

Query: 186 --------VLTLVSQIDVNNEF--EKLQRERGLGSEKHRKEVSDLIKECRQSLAESLFAW 235
                   +L L+ + D +N+F  E +    GL +    K V +++ +  + + ES  +W
Sbjct: 730 EASKVEVLLLELLYKTDYSNDFDSEGVIMCFGLCARGQVKTVLNVLHDFEERIQESEQSW 789


>gi|239741905 PREDICTED: HEAT repeat containing 7B1 [Homo sapiens]
          Length = 1710

 Score = 35.0 bits (79), Expect = 0.74
 Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 22/120 (18%)

Query: 136 WDGKRCIANSLKALIQSRRGKTWTLELSPELASMTTRFTDELMEQGLTYK---------- 185
           W+ K  +   L+  ++  RG +W+L LS EL +    F    +E+G  Y+          
Sbjct: 672 WEDK--LIQFLRNSLKKTRGSSWSLRLSKELNNQIASFDSPSLEKGFLYRALGFTLATGL 729

Query: 186 --------VLTLVSQIDVNNEF--EKLQRERGLGSEKHRKEVSDLIKECRQSLAESLFAW 235
                   +L L+ + D +N+F  E +    GL +    K V +++ +  + + ES  +W
Sbjct: 730 EASKVEVLLLELLYKTDYSNDFDSEGVIMCFGLCARGQVKTVLNVLHDFEERIQESEQSW 789


>gi|221316650 ephrin receptor EphA1 [Homo sapiens]
          Length = 976

 Score = 32.7 bits (73), Expect = 3.7
 Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 4/85 (4%)

Query: 440 EHLMLLIGELYKKNPFHLELALEYWCPTEPLQTPTIMGSYLGVAHQRPPQRQVVLSKFVR 499
           E L  L   L KK P  LEL    W  + P      +   L V +Q   + Q+VL   V 
Sbjct: 446 ESLSGLSLRLVKKEPRQLELT---WAGSRPRSPGANLTYELHVLNQDEERYQMVLEPRVL 502

Query: 500 QMGDLLPPTIYIPYLKMLQGLANGP 524
            + +L P T YI  ++ML  L  GP
Sbjct: 503 -LTELQPDTTYIVRVRMLTPLGPGP 526


>gi|116805788 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
          Length = 1253

 Score = 32.7 bits (73), Expect = 3.7
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 1217 EHKNLRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEISTVLQYVVGRNKLLQCL 1276
            E KN++    C+VK  H         L+ MA     P  ++E   +  ++   N++ QCL
Sbjct: 173  ELKNMK----CSVKNDHSAYKRAAQFLRKMAD----PQSIQESQNLSMFLANHNRITQCL 224

Query: 1277 HAKRHALESWRQLVEIILTAC 1297
            H +   +  + +L+  I+  C
Sbjct: 225  HQQLEVIPGYEELLADIVNIC 245


>gi|82617634 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
          Length = 1253

 Score = 32.7 bits (73), Expect = 3.7
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 1217 EHKNLRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEISTVLQYVVGRNKLLQCL 1276
            E KN++    C+VK  H         L+ MA     P  ++E   +  ++   N++ QCL
Sbjct: 173  ELKNMK----CSVKNDHSAYKRAAQFLRKMAD----PQSIQESQNLSMFLANHNRITQCL 224

Query: 1277 HAKRHALESWRQLVEIILTAC 1297
            H +   +  + +L+  I+  C
Sbjct: 225  HQQLEVIPGYEELLADIVNIC 245


>gi|82617630 cytoplasmic FMR1 interacting protein 2 [Homo sapiens]
          Length = 1253

 Score = 32.7 bits (73), Expect = 3.7
 Identities = 20/81 (24%), Positives = 37/81 (45%), Gaps = 8/81 (9%)

Query: 1217 EHKNLRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEISTVLQYVVGRNKLLQCL 1276
            E KN++    C+VK  H         L+ MA     P  ++E   +  ++   N++ QCL
Sbjct: 173  ELKNMK----CSVKNDHSAYKRAAQFLRKMAD----PQSIQESQNLSMFLANHNRITQCL 224

Query: 1277 HAKRHALESWRQLVEIILTAC 1297
            H +   +  + +L+  I+  C
Sbjct: 225  HQQLEVIPGYEELLADIVNIC 245


>gi|217330634 serine/threonine kinase 36 [Homo sapiens]
          Length = 1315

 Score = 32.7 bits (73), Expect = 3.7
 Identities = 25/114 (21%), Positives = 45/114 (39%), Gaps = 5/114 (4%)

Query: 1610 PTPVDRYRQILLPALQLCQVILTSSMAQHL-QAAGQVLQFLISHSDTIQAILRCQDVSAG 1668
            P P+    Q+  P   LC       +   L +A GQ+L+ ++  +  I    R       
Sbjct: 429  PVPI----QLKAPLTLLCNPDFCQRIQSQLHEAGGQILKGILEGASHILPAFRVLSSLLS 484

Query: 1669 SLQELALLTGIISKAALPGILSELDVDVNEGSLMELQGHIGRFQRQCLGLLSRF 1722
            S  +   L     +A LPG+L  L     E + ++ Q   G F +  + ++  +
Sbjct: 485  SCSDSVALYSFCREAGLPGLLLSLLRHSQESNSLQQQSWYGTFLQDLMAVIQAY 538


>gi|25092658 hypothetical protein LOC221927 [Homo sapiens]
          Length = 821

 Score = 32.7 bits (73), Expect = 3.7
 Identities = 19/54 (35%), Positives = 26/54 (48%)

Query: 1014 PVSTTNLQDPGVLGCPRTCLHAILNILEKGTEGRTGPVAVRESPQLAELCYQVI 1067
            P     L DPG      TCL  +L+  +  TEG +  V ++E P L EL   V+
Sbjct: 10   PALCAVLVDPGQPVADDTCLEKLLDWFKTVTEGESSVVLLQEHPCLVELLSHVL 63


>gi|50726952 retinol dehydrogenase 5 (11-cis and 9-cis) [Homo sapiens]
          Length = 318

 Score = 32.0 bits (71), Expect = 6.3
 Identities = 19/66 (28%), Positives = 35/66 (53%), Gaps = 4/66 (6%)

Query: 1520 GYLKVLVDSLVEDDRTLQSLLTPQPPLLKALYTYESKMAFLTRVAKIQQGALELLRSGVI 1579
            G+ +  V +L   ++TLQ+     PP  +A Y      AFLT+  K+QQ  + L+    +
Sbjct: 206  GFFRTPVTNLESLEKTLQACWARLPPATQAHYGG----AFLTKYLKMQQRIMNLICDPDL 261

Query: 1580 VRLAQC 1585
             ++++C
Sbjct: 262  TKVSRC 267


>gi|171184451 centrosome-associated protein 350 [Homo sapiens]
          Length = 3117

 Score = 32.0 bits (71), Expect = 6.3
 Identities = 36/136 (26%), Positives = 63/136 (46%), Gaps = 16/136 (11%)

Query: 1237 VAEVNALQGMAAIGQRPLLMEEISTVLQYVVGRNKLLQCLHAKRHALESWRQLVEIILTA 1296
            +++V  ++G++   Q  + + +I    Q    R+  L  L A++ ALES RQL E    A
Sbjct: 1346 LSDVERVRGISLAQQESVSLAQIIKAQQQRHERDLALLKLKAEQEALESQRQLEETRNKA 1405

Query: 1297 C---PQDLIQAEDRQLIIRDILQDVHDKI---------LDDEAAQELMPVVAGAVFTLTA 1344
                 + L Q    Q  + ++LQ+   KI         L  +AA+++  +   A  T T 
Sbjct: 1406 AQVHAESLQQVVQSQREVTEVLQEATCKIAAQQSETARLTTDAARQICEM---AELTRT- 1461

Query: 1345 HLSQAVLTEQKQTSVL 1360
            H+S AV+      ++L
Sbjct: 1462 HISDAVVASGAPLAIL 1477


>gi|239753095 PREDICTED: similar to hCG1725380 [Homo sapiens]
          Length = 583

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 47  KPDFISLF--KNPPKNVQQHEKVQKASTEGVAIQGQQGTRLLPEQLIKEAF 95
           KPD I+    +N P NV++HE V +     V+    Q   LLPE  IK++F
Sbjct: 210 KPDLITCLEQRNEPWNVKKHETVARHPVSAVSSHFTQD--LLPEHGIKDSF 258


>gi|239747658 PREDICTED: similar to hCG1725380 [Homo sapiens]
          Length = 583

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 47  KPDFISLF--KNPPKNVQQHEKVQKASTEGVAIQGQQGTRLLPEQLIKEAF 95
           KPD I+    +N P NV++HE V +     V+    Q   LLPE  IK++F
Sbjct: 210 KPDLITCLEQRNEPWNVKKHETVARHPVSAVSSHFTQD--LLPEHGIKDSF 258


>gi|239741529 PREDICTED: similar to hCG1725380 [Homo sapiens]
          Length = 583

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 4/51 (7%)

Query: 47  KPDFISLF--KNPPKNVQQHEKVQKASTEGVAIQGQQGTRLLPEQLIKEAF 95
           KPD I+    +N P NV++HE V +     V+    Q   LLPE  IK++F
Sbjct: 210 KPDLITCLEQRNEPWNVKKHETVARHPVSAVSSHFTQD--LLPEHGIKDSF 258


>gi|4506057 cAMP-dependent protein kinase catalytic subunit beta
           isoform 2 [Homo sapiens]
          Length = 351

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 24  VGNALWRRQPEAVHLLDKILKKHKPDFISLFKNPPKNVQQHEKVQKASTEGVAIQGQQGT 83
           +GNA   ++   V  + + L K K DF+  ++NP +N    E  ++  T G    G  G 
Sbjct: 1   MGNAATAKKGSEVESVKEFLAKAKEDFLKKWENPTQNNAGLEDFERKKTLGT---GSFGR 57

Query: 84  RLLPEQLIKEAFILSDLFD---IGELAAVELLLAGEH--QQPHFPGLTR 127
            +L +    E +    + D   + +L  +E  L  +   Q  +FP L R
Sbjct: 58  VMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVR 106


>gi|46909587 cAMP-dependent protein kinase catalytic subunit beta
           isoform 3 [Homo sapiens]
          Length = 257

 Score = 31.6 bits (70), Expect = 8.2
 Identities = 28/109 (25%), Positives = 48/109 (44%), Gaps = 8/109 (7%)

Query: 24  VGNALWRRQPEAVHLLDKILKKHKPDFISLFKNPPKNVQQHEKVQKASTEGVAIQGQQGT 83
           +GNA   ++   V  + + L K K DF+  ++NP +N    E  ++  T G    G  G 
Sbjct: 1   MGNAATAKKGSEVESVKEFLAKAKEDFLKKWENPTQNNAGLEDFERKKTLGT---GSFGR 57

Query: 84  RLLPEQLIKEAFILSDLFD---IGELAAVELLLAGEH--QQPHFPGLTR 127
            +L +    E +    + D   + +L  +E  L  +   Q  +FP L R
Sbjct: 58  VMLVKHKATEQYYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVR 106


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,496,447
Number of Sequences: 37866
Number of extensions: 3260781
Number of successful extensions: 7482
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 7457
Number of HSP's gapped (non-prelim): 35
length of query: 2012
length of database: 18,247,518
effective HSP length: 117
effective length of query: 1895
effective length of database: 13,817,196
effective search space: 26183586420
effective search space used: 26183586420
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 70 (31.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.