Guide to the Human Genome
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Name: CYFIP2 Sequence: fasta or formatted (1253aa) NCBI GI: 116805788
Description:

cytoplasmic FMR1 interacting protein 2

Referenced in:

Additional Brain Proteins
p53 Pathway

Other entries for this name:
alt mRNA [1253aa] cytoplasmic FMR1 interacting protein 2
alt mRNA [1253aa] cytoplasmic FMR1 interacting protein 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         70           2
 C cysteine            2.6         33           2
 D aspartate           4.6         58           2
 E glutamate           7.7         97           2
 F phenylalanine       4.9         62           3
 G glycine             3.8         48           2
 H histidine           2.6         32           2
 I isoleucine          6.5         81           2
 K lysine              6.0         75           3
 L leucine            10.9        137           2
 M methionine          3.2         40           2
 N asparagine          4.2         52           2
 P proline             4.5         56           3
 Q glutamine           5.2         65           2
 R arginine            5.9         74           2
 S serine              5.9         74           2
 T threonine           4.3         54           2
 V valine              6.0         75           2
 W tryptophan          1.0         12           1
 Y tyrosine            4.6         58           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cytoplasmic FMR1 interacting protein 2 
CYFIP2                1.000   cytoplasmic FMR1 interacting protein 2 
CYFIP2                1.000   cytoplasmic FMR1 interacting protein 2 
CYFIP1                0.886   cytoplasmic FMR1 interacting protein 1 isoform a [Ho...
CYFIP1                0.482   cytoplasmic FMR1 interacting protein 1 isoform b [Ho...
LRRC28                0.004   leucine rich repeat containing 28 
FAM49A                0.004   family with sequence similarity 49, member A 
NUP205                0.003   nucleoporin 205kDa 
RFX1                  0.003   regulatory factor X1 
LPHN1                 0.003   latrophilin 1 isoform 1 precursor 
LPHN1                 0.003   latrophilin 1 isoform 2 precursor 
FAM49B                0.003   hypothetical protein LOC51571 
RASGEF1C              0.003   RasGEF domain family, member 1C 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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