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Search of human proteins with 56549685
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|56549685 GTP-binding protein 8 isoform 1 [Homo sapiens]
(284 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|56549685 GTP-binding protein 8 isoform 1 [Homo sapiens] 563 e-161
gi|56549687 GTP-binding protein 8 isoform 2 [Homo sapiens] 484 e-137
gi|164698504 septin 9 isoform f [Homo sapiens] 37 0.026
gi|164698502 septin 9 isoform d [Homo sapiens] 37 0.026
gi|164698500 septin 9 isoform e [Homo sapiens] 37 0.026
gi|164698498 septin 9 isoform b [Homo sapiens] 37 0.026
gi|164698496 septin 9 isoform e [Homo sapiens] 37 0.026
gi|164698494 septin 9 isoform a [Homo sapiens] 37 0.026
gi|116256489 septin 9 isoform c [Homo sapiens] 37 0.026
gi|8922712 septin 11 [Homo sapiens] 36 0.044
gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)... 35 0.098
gi|56549640 septin 2 [Homo sapiens] 35 0.098
gi|56549638 septin 2 [Homo sapiens] 35 0.098
gi|56549636 septin 2 [Homo sapiens] 35 0.098
gi|4758158 septin 2 [Homo sapiens] 35 0.098
gi|223029424 large subunit GTPase 1 [Homo sapiens] 34 0.13
gi|38788319 guanine nucleotide binding protein-like 1 [Homo sapi... 34 0.13
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ... 34 0.17
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ... 34 0.17
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ... 34 0.17
gi|21361478 septin 6 isoform B [Homo sapiens] 33 0.28
gi|22035581 septin 6 isoform D [Homo sapiens] 33 0.28
gi|22035579 septin 6 isoform A [Homo sapiens] 33 0.28
gi|22035577 septin 6 isoform A [Homo sapiens] 33 0.28
gi|149363638 septin 8 isoform c [Homo sapiens] 33 0.28
gi|149363689 septin 8 isoform a [Homo sapiens] 33 0.28
gi|149363661 septin 8 isoform b [Homo sapiens] 33 0.28
gi|111955139 GTP-binding protein 10 isoform 2 [Homo sapiens] 32 0.63
gi|156602655 septin 3 isoform A [Homo sapiens] 32 0.83
gi|156602653 septin 3 isoform B [Homo sapiens] 32 0.83
>gi|56549685 GTP-binding protein 8 isoform 1 [Homo sapiens]
Length = 284
Score = 563 bits (1450), Expect = e-161
Identities = 284/284 (100%), Positives = 284/284 (100%)
Query: 1 MAAPGLRLGAGRLFEMPAVLERLSRYNSTSQAFAEVLRLPKQQLRKLLYPLQEVERFLAP 60
MAAPGLRLGAGRLFEMPAVLERLSRYNSTSQAFAEVLRLPKQQLRKLLYPLQEVERFLAP
Sbjct: 1 MAAPGLRLGAGRLFEMPAVLERLSRYNSTSQAFAEVLRLPKQQLRKLLYPLQEVERFLAP 60
Query: 61 YGRQDLHLRIFDPSPEDIARADNIFTATERNRIDYVSSAVRIDHAPDLPRPEVCFIGRSN 120
YGRQDLHLRIFDPSPEDIARADNIFTATERNRIDYVSSAVRIDHAPDLPRPEVCFIGRSN
Sbjct: 61 YGRQDLHLRIFDPSPEDIARADNIFTATERNRIDYVSSAVRIDHAPDLPRPEVCFIGRSN 120
Query: 121 VGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMPGYGFRAPEDFVDMV 180
VGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMPGYGFRAPEDFVDMV
Sbjct: 121 VGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMPGYGFRAPEDFVDMV 180
Query: 181 ETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQV 240
ETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQV
Sbjct: 181 ETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQV 240
Query: 241 LQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLRCFIASVTGSLD 284
LQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLRCFIASVTGSLD
Sbjct: 241 LQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLRCFIASVTGSLD 284
>gi|56549687 GTP-binding protein 8 isoform 2 [Homo sapiens]
Length = 251
Score = 484 bits (1245), Expect = e-137
Identities = 251/284 (88%), Positives = 251/284 (88%), Gaps = 33/284 (11%)
Query: 1 MAAPGLRLGAGRLFEMPAVLERLSRYNSTSQAFAEVLRLPKQQLRKLLYPLQEVERFLAP 60
MAAPGLRLGAGRLFEMPAVLERLSRYNSTSQAFAEVLRLPKQQLRKLLYPLQEVERFLAP
Sbjct: 1 MAAPGLRLGAGRLFEMPAVLERLSRYNSTSQAFAEVLRLPKQQLRKLLYPLQEVERFLAP 60
Query: 61 YGRQDLHLRIFDPSPEDIARADNIFTATERNRIDYVSSAVRIDHAPDLPRPEVCFIGRSN 120
YGRQDLHLRIFDPSPEDIARADNIFTATERNRIDYVSSAVRIDHAPDLPRPE
Sbjct: 61 YGRQDLHLRIFDPSPEDIARADNIFTATERNRIDYVSSAVRIDHAPDLPRPE-------- 112
Query: 121 VGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMPGYGFRAPEDFVDMV 180
GHTKKMNFFKVGKHFTVVDMPGYGFRAPEDFVDMV
Sbjct: 113 -------------------------GHTKKMNFFKVGKHFTVVDMPGYGFRAPEDFVDMV 147
Query: 181 ETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQV 240
ETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQV
Sbjct: 148 ETYLKERRNLKRTFLLVDSVVGIQKTDNIAIEMCEEFALPYVIVLTKIDKSSKGHLLKQV 207
Query: 241 LQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLRCFIASVTGSLD 284
LQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLRCFIASVTGSLD
Sbjct: 208 LQIQKFVNMKTQGCFPQLFPVSAVTFSGIHLLRCFIASVTGSLD 251
>gi|164698504 septin 9 isoform f [Homo sapiens]
Length = 335
Score = 36.6 bits (83), Expect = 0.026
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 113 VCFIGRSNVGKSSLIKALF-------SLAPEVEVRVSKK---PGHTKKMNFFKVGKHFTV 162
+ +G+S +GKS+LI LF S+ P E R+ K T + V TV
Sbjct: 50 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 109
Query: 163 VDMPGYGFRAPED--------FV-DMVETYLKERRNLKRTFLLVDSVV 201
+D PG+G + F+ D E YL+E N+ R + D+ V
Sbjct: 110 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRV 157
>gi|164698502 septin 9 isoform d [Homo sapiens]
Length = 474
Score = 36.6 bits (83), Expect = 0.026
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 113 VCFIGRSNVGKSSLIKALF-------SLAPEVEVRVSKK---PGHTKKMNFFKVGKHFTV 162
+ +G+S +GKS+LI LF S+ P E R+ K T + V TV
Sbjct: 189 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 248
Query: 163 VDMPGYGFRAPED--------FV-DMVETYLKERRNLKRTFLLVDSVV 201
+D PG+G + F+ D E YL+E N+ R + D+ V
Sbjct: 249 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRV 296
>gi|164698500 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 36.6 bits (83), Expect = 0.026
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 113 VCFIGRSNVGKSSLIKALF-------SLAPEVEVRVSKK---PGHTKKMNFFKVGKHFTV 162
+ +G+S +GKS+LI LF S+ P E R+ K T + V TV
Sbjct: 137 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 196
Query: 163 VDMPGYGFRAPED--------FV-DMVETYLKERRNLKRTFLLVDSVV 201
+D PG+G + F+ D E YL+E N+ R + D+ V
Sbjct: 197 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRV 244
>gi|164698498 septin 9 isoform b [Homo sapiens]
Length = 579
Score = 36.6 bits (83), Expect = 0.026
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 113 VCFIGRSNVGKSSLIKALF-------SLAPEVEVRVSKK---PGHTKKMNFFKVGKHFTV 162
+ +G+S +GKS+LI LF S+ P E R+ K T + V TV
Sbjct: 294 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 353
Query: 163 VDMPGYGFRAPED--------FV-DMVETYLKERRNLKRTFLLVDSVV 201
+D PG+G + F+ D E YL+E N+ R + D+ V
Sbjct: 354 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRV 401
>gi|164698496 septin 9 isoform e [Homo sapiens]
Length = 422
Score = 36.6 bits (83), Expect = 0.026
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 113 VCFIGRSNVGKSSLIKALF-------SLAPEVEVRVSKK---PGHTKKMNFFKVGKHFTV 162
+ +G+S +GKS+LI LF S+ P E R+ K T + V TV
Sbjct: 137 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 196
Query: 163 VDMPGYGFRAPED--------FV-DMVETYLKERRNLKRTFLLVDSVV 201
+D PG+G + F+ D E YL+E N+ R + D+ V
Sbjct: 197 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRV 244
>gi|164698494 septin 9 isoform a [Homo sapiens]
Length = 586
Score = 36.6 bits (83), Expect = 0.026
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 113 VCFIGRSNVGKSSLIKALF-------SLAPEVEVRVSKK---PGHTKKMNFFKVGKHFTV 162
+ +G+S +GKS+LI LF S+ P E R+ K T + V TV
Sbjct: 301 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 360
Query: 163 VDMPGYGFRAPED--------FV-DMVETYLKERRNLKRTFLLVDSVV 201
+D PG+G + F+ D E YL+E N+ R + D+ V
Sbjct: 361 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRV 408
>gi|116256489 septin 9 isoform c [Homo sapiens]
Length = 568
Score = 36.6 bits (83), Expect = 0.026
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 19/108 (17%)
Query: 113 VCFIGRSNVGKSSLIKALF-------SLAPEVEVRVSKK---PGHTKKMNFFKVGKHFTV 162
+ +G+S +GKS+LI LF S+ P E R+ K T + V TV
Sbjct: 283 IMVVGQSGLGKSTLINTLFKSKISRKSVQPTSEERIPKTIEIKSITHDIEEKGVRMKLTV 342
Query: 163 VDMPGYGFRAPED--------FV-DMVETYLKERRNLKRTFLLVDSVV 201
+D PG+G + F+ D E YL+E N+ R + D+ V
Sbjct: 343 IDTPGFGDHINNENCWQPIMKFINDQYEKYLQEEVNINRKKRIPDTRV 390
>gi|8922712 septin 11 [Homo sapiens]
Length = 429
Score = 35.8 bits (81), Expect = 0.044
Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 14/92 (15%)
Query: 116 IGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFK-----VGKHFTVVDMPGYGF 170
+G + +GKS+L+ LF+ E + +PG K ++ V T+VD G+G
Sbjct: 47 VGETGIGKSTLMDTLFNTKFESDPATHNEPGVRLKARSYELQESNVRLKLTIVDTVGFGD 106
Query: 171 RAPED--------FVD-MVETYLKERRNLKRT 193
+ +D ++D E YL+E +KR+
Sbjct: 107 QINKDDSYKPIVEYIDAQFEAYLQEELKIKRS 138
>gi|7019419 guanine nucleotide binding protein-like 2 (nucleolar)
[Homo sapiens]
Length = 731
Score = 34.7 bits (78), Expect = 0.098
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 107 DLPRPEVCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMP 166
D + V FIG NVGKSS+I L S + V+ G TK + + + ++D P
Sbjct: 307 DKKQISVGFIGYPNVGKSSVINTLRS---KKVCNVAPIAGETKVWQYITLMRRIFLIDCP 363
Query: 167 GYGFRAPEDFVDMV 180
G + + + D+V
Sbjct: 364 GVVYPSEDSETDIV 377
>gi|56549640 septin 2 [Homo sapiens]
Length = 361
Score = 34.7 bits (78), Expect = 0.098
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 116 IGRSNVGKSSLIKALF--SLAPEVEV--------RVSKKPGHTKKMNFFKVGKHFTVVDM 165
+G S +GKS+LI +LF L PE + R + T ++ V TVVD
Sbjct: 43 VGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDT 102
Query: 166 PGYG--------FRAPEDFVD-MVETYLKERRNLKRTFLLVDSV 200
PGYG F+ ++D E YL + L R ++ + V
Sbjct: 103 PGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRV 146
>gi|56549638 septin 2 [Homo sapiens]
Length = 361
Score = 34.7 bits (78), Expect = 0.098
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 116 IGRSNVGKSSLIKALF--SLAPEVEV--------RVSKKPGHTKKMNFFKVGKHFTVVDM 165
+G S +GKS+LI +LF L PE + R + T ++ V TVVD
Sbjct: 43 VGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDT 102
Query: 166 PGYG--------FRAPEDFVD-MVETYLKERRNLKRTFLLVDSV 200
PGYG F+ ++D E YL + L R ++ + V
Sbjct: 103 PGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRV 146
>gi|56549636 septin 2 [Homo sapiens]
Length = 361
Score = 34.7 bits (78), Expect = 0.098
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 116 IGRSNVGKSSLIKALF--SLAPEVEV--------RVSKKPGHTKKMNFFKVGKHFTVVDM 165
+G S +GKS+LI +LF L PE + R + T ++ V TVVD
Sbjct: 43 VGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDT 102
Query: 166 PGYG--------FRAPEDFVD-MVETYLKERRNLKRTFLLVDSV 200
PGYG F+ ++D E YL + L R ++ + V
Sbjct: 103 PGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRV 146
>gi|4758158 septin 2 [Homo sapiens]
Length = 361
Score = 34.7 bits (78), Expect = 0.098
Identities = 31/104 (29%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 116 IGRSNVGKSSLIKALF--SLAPEVEV--------RVSKKPGHTKKMNFFKVGKHFTVVDM 165
+G S +GKS+LI +LF L PE + R + T ++ V TVVD
Sbjct: 43 VGESGLGKSTLINSLFLTDLYPERVIPGAAEKIERTVQIEASTVEIEERGVKLRLTVVDT 102
Query: 166 PGYG--------FRAPEDFVD-MVETYLKERRNLKRTFLLVDSV 200
PGYG F+ ++D E YL + L R ++ + V
Sbjct: 103 PGYGDAINCRDCFKTIISYIDEQFERYLHDESGLNRRHIIDNRV 146
>gi|223029424 large subunit GTPase 1 [Homo sapiens]
Length = 658
Score = 34.3 bits (77), Expect = 0.13
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 113 VCFIGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMPG 167
V +G NVGKSS I + +V VS PGHTK V + D PG
Sbjct: 389 VGLVGYPNVGKSSTINTIMG---NKKVSVSATPGHTKHFQTLYVEPGLCLCDCPG 440
>gi|38788319 guanine nucleotide binding protein-like 1 [Homo
sapiens]
Length = 607
Score = 34.3 bits (77), Expect = 0.13
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Query: 116 IGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMPGYGF 170
+G NVGKSSLI L V VS+ PGHT+ + + + D PG F
Sbjct: 366 VGFPNVGKSSLINGLVG---RKVVSVSRTPGHTRYFQTYFLTPSVKLCDCPGLIF 417
>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 33.9 bits (76), Expect = 0.17
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 116 IGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMPGY 168
IG NVGKSS+I SL E V G T+ M + K T++D P +
Sbjct: 248 IGFPNVGKSSIIN---SLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSF 297
>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
[Homo sapiens]
Length = 537
Score = 33.9 bits (76), Expect = 0.17
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 116 IGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMPGY 168
IG NVGKSS+I SL E V G T+ M + K T++D P +
Sbjct: 248 IGFPNVGKSSIIN---SLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSF 297
>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
[Homo sapiens]
Length = 549
Score = 33.9 bits (76), Expect = 0.17
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 116 IGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFFKVGKHFTVVDMPGY 168
IG NVGKSS+I SL E V G T+ M + K T++D P +
Sbjct: 260 IGFPNVGKSSIIN---SLKQEQMCNVGVSMGLTRSMQVVPLDKQITIIDSPSF 309
>gi|21361478 septin 6 isoform B [Homo sapiens]
Length = 434
Score = 33.1 bits (74), Expect = 0.28
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 28/155 (18%)
Query: 116 IGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFF-----KVGKHFTVVDMPGYG- 169
+G + +GKS+L+ LF+ E E +PG + N + V T+V G+G
Sbjct: 48 VGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGD 107
Query: 170 -------FRAPEDFVD-MVETYLKERRNLKRT-------------FLLVDSVVGIQKTDN 208
++ +F+D E YL+E ++R + + + ++ D
Sbjct: 108 QINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLDL 167
Query: 209 IAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQI 243
+ ++ + + + ++ K D SK L K ++I
Sbjct: 168 VTMKKLDS-KVNIIPIIAKADAISKSELTKFKIKI 201
>gi|22035581 septin 6 isoform D [Homo sapiens]
Length = 429
Score = 33.1 bits (74), Expect = 0.28
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 28/155 (18%)
Query: 116 IGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFF-----KVGKHFTVVDMPGYG- 169
+G + +GKS+L+ LF+ E E +PG + N + V T+V G+G
Sbjct: 48 VGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGD 107
Query: 170 -------FRAPEDFVD-MVETYLKERRNLKRT-------------FLLVDSVVGIQKTDN 208
++ +F+D E YL+E ++R + + + ++ D
Sbjct: 108 QINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLDL 167
Query: 209 IAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQI 243
+ ++ + + + ++ K D SK L K ++I
Sbjct: 168 VTMKKLDS-KVNIIPIIAKADAISKSELTKFKIKI 201
>gi|22035579 septin 6 isoform A [Homo sapiens]
Length = 427
Score = 33.1 bits (74), Expect = 0.28
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 28/155 (18%)
Query: 116 IGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFF-----KVGKHFTVVDMPGYG- 169
+G + +GKS+L+ LF+ E E +PG + N + V T+V G+G
Sbjct: 48 VGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGD 107
Query: 170 -------FRAPEDFVD-MVETYLKERRNLKRT-------------FLLVDSVVGIQKTDN 208
++ +F+D E YL+E ++R + + + ++ D
Sbjct: 108 QINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLDL 167
Query: 209 IAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQI 243
+ ++ + + + ++ K D SK L K ++I
Sbjct: 168 VTMKKLDS-KVNIIPIIAKADAISKSELTKFKIKI 201
>gi|22035577 septin 6 isoform A [Homo sapiens]
Length = 427
Score = 33.1 bits (74), Expect = 0.28
Identities = 32/155 (20%), Positives = 65/155 (41%), Gaps = 28/155 (18%)
Query: 116 IGRSNVGKSSLIKALFSLAPEVEVRVSKKPGHTKKMNFF-----KVGKHFTVVDMPGYG- 169
+G + +GKS+L+ LF+ E E +PG + N + V T+V G+G
Sbjct: 48 VGETGLGKSTLMDTLFNTKFEGEPATHTQPGVQLQSNTYDLQESNVRLKLTIVSTVGFGD 107
Query: 170 -------FRAPEDFVD-MVETYLKERRNLKRT-------------FLLVDSVVGIQKTDN 208
++ +F+D E YL+E ++R + + + ++ D
Sbjct: 108 QINKEDSYKPIVEFIDAQFEAYLQEELKIRRVLHTYHDSRIHVCLYFIAPTGHSLKSLDL 167
Query: 209 IAIEMCEEFALPYVIVLTKIDKSSKGHLLKQVLQI 243
+ ++ + + + ++ K D SK L K ++I
Sbjct: 168 VTMKKLDS-KVNIIPIIAKADAISKSELTKFKIKI 201
>gi|149363638 septin 8 isoform c [Homo sapiens]
Length = 442
Score = 33.1 bits (74), Expect = 0.28
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 116 IGRSNVGKSSLIKALFSLAPEV------EVRVSKKPGHTKKMNFFKVGKHFTVVDMPGYG 169
+G + +GKS+L+ LF+ E E V +P T + V T+VD G+G
Sbjct: 50 VGETGIGKSTLMNTLFNTTFETEEASHHEACVRLRP-QTYDLQESNVQLKLTIVDAVGFG 108
Query: 170 --------FRAPEDFVD-MVETYLKERRNLKRT 193
+R D++D E YL+E ++R+
Sbjct: 109 DQINKDESYRPIVDYIDAQFENYLQEELKIRRS 141
>gi|149363689 septin 8 isoform a [Homo sapiens]
Length = 483
Score = 33.1 bits (74), Expect = 0.28
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 116 IGRSNVGKSSLIKALFSLAPEV------EVRVSKKPGHTKKMNFFKVGKHFTVVDMPGYG 169
+G + +GKS+L+ LF+ E E V +P T + V T+VD G+G
Sbjct: 50 VGETGIGKSTLMNTLFNTTFETEEASHHEACVRLRP-QTYDLQESNVQLKLTIVDAVGFG 108
Query: 170 --------FRAPEDFVD-MVETYLKERRNLKRT 193
+R D++D E YL+E ++R+
Sbjct: 109 DQINKDESYRPIVDYIDAQFENYLQEELKIRRS 141
>gi|149363661 septin 8 isoform b [Homo sapiens]
Length = 429
Score = 33.1 bits (74), Expect = 0.28
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Query: 116 IGRSNVGKSSLIKALFSLAPEV------EVRVSKKPGHTKKMNFFKVGKHFTVVDMPGYG 169
+G + +GKS+L+ LF+ E E V +P T + V T+VD G+G
Sbjct: 50 VGETGIGKSTLMNTLFNTTFETEEASHHEACVRLRP-QTYDLQESNVQLKLTIVDAVGFG 108
Query: 170 --------FRAPEDFVD-MVETYLKERRNLKRT 193
+R D++D E YL+E ++R+
Sbjct: 109 DQINKDESYRPIVDYIDAQFENYLQEELKIRRS 141
>gi|111955139 GTP-binding protein 10 isoform 2 [Homo sapiens]
Length = 387
Score = 32.0 bits (71), Expect = 0.63
Identities = 47/191 (24%), Positives = 77/191 (40%), Gaps = 33/191 (17%)
Query: 112 EVCFIGRSNVGKSSLIKALFSLAPEVE--VRVSKKPGHTKKMNFFKVGKHFTVVDMPGYG 169
+V +G N GKSSL+ + P + + KP K M + K +V D+PG
Sbjct: 150 DVGLVGFPNAGKSSLLSCVSHAKPAIADYAFTTLKPELGKIM--YSDFKQISVADLPGL- 206
Query: 170 FRAPEDFVDMVETYLKERRNLKRTFLLVDSVVGIQKTDN--------IAIEMCEEFAL-- 219
M +LK ++ +VD + G Q + + I + +E L
Sbjct: 207 IEGAHMNKGMGHKFLKHIERTRQLLFVVD-ISGFQLSSHTQYRTAFETIILLTKELELYK 265
Query: 220 ------PYVIVLTKI---DKSSKGHLLKQVLQIQK-FVNMKTQGCFPQ-------LFPVS 262
P ++ + K+ D K H L LQ K F+++ + P+ + P+S
Sbjct: 266 EELQTKPALLAVNKMDLPDAQDKFHELMSQLQNPKDFLHLFEKNMIPERTVEFQHIIPIS 325
Query: 263 AVTFSGIHLLR 273
AVT GI L+
Sbjct: 326 AVTGEGIEELK 336
>gi|156602655 septin 3 isoform A [Homo sapiens]
Length = 358
Score = 31.6 bits (70), Expect = 0.83
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 39/152 (25%)
Query: 113 VCFIGRSNVGKSSLIKALF---------------SLAPEVEVRVSKKPGHTKKMNFFKVG 157
+ +G+S +GKS+L+ LF + VE+ K GH + K+
Sbjct: 64 IMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEI---KAIGHVIEEGGVKM- 119
Query: 158 KHFTVVDMPGYG--------FRAPEDFV-DMVETYLKERRNLKRTFLLVDSVVGIQKTDN 208
TV+D PG+G + E ++ + E +LKE N+ R + D+
Sbjct: 120 -KLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRIPDT--------- 169
Query: 209 IAIEMCEEFALPYVIVLTKIDKSSKGHLLKQV 240
+ C F P L +D HL K V
Sbjct: 170 -RVHCCLYFISPTGHSLRPLDLEFMKHLSKVV 200
>gi|156602653 septin 3 isoform B [Homo sapiens]
Length = 350
Score = 31.6 bits (70), Expect = 0.83
Identities = 37/152 (24%), Positives = 59/152 (38%), Gaps = 39/152 (25%)
Query: 113 VCFIGRSNVGKSSLIKALF---------------SLAPEVEVRVSKKPGHTKKMNFFKVG 157
+ +G+S +GKS+L+ LF + VE+ K GH + K+
Sbjct: 64 IMVVGQSGLGKSTLVNTLFKSQVSRKASSWNREEKIPKTVEI---KAIGHVIEEGGVKM- 119
Query: 158 KHFTVVDMPGYG--------FRAPEDFV-DMVETYLKERRNLKRTFLLVDSVVGIQKTDN 208
TV+D PG+G + E ++ + E +LKE N+ R + D+
Sbjct: 120 -KLTVIDTPGFGDQINNENCWEPIEKYINEQYEKFLKEEVNIARKKRIPDT--------- 169
Query: 209 IAIEMCEEFALPYVIVLTKIDKSSKGHLLKQV 240
+ C F P L +D HL K V
Sbjct: 170 -RVHCCLYFISPTGHSLRPLDLEFMKHLSKVV 200
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,003,097
Number of Sequences: 37866
Number of extensions: 420687
Number of successful extensions: 1277
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1253
Number of HSP's gapped (non-prelim): 56
length of query: 284
length of database: 18,247,518
effective HSP length: 101
effective length of query: 183
effective length of database: 14,423,052
effective search space: 2639418516
effective search space used: 2639418516
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.