Guide to the Human Genome
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Name: SEPT3 Sequence: fasta or formatted (358aa) NCBI GI: 156602655
Description:

septin 3 isoform A

Referenced in:

Additional Cell Cycle Functions

Other entries for this name:
alt prot [350aa] septin 3 isoform B
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.6         13           2
 C cysteine            1.4          5           2
 D aspartate           4.5         16           1
 E glutamate          10.1         36           2
 F phenylalanine       3.6         13           1
 G glycine             6.4         23           2
 H histidine           2.2          8           1
 I isoleucine          7.3         26           2
 K lysine              9.2         33           2
 L leucine             7.8         28           2
 M methionine          3.1         11           1
 N asparagine          5.3         19           2
 P proline             6.7         24           2
 Q glutamine           2.8         10           1
 R arginine            5.0         18           1
 S serine              4.5         16           2
 T threonine           6.1         22           1
 V valine              7.3         26           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   septin 3 isoform A 
SEPT3                 0.936   septin 3 isoform B 
SEPT9                 0.607   septin 9 isoform d 
SEPT9                 0.607   septin 9 isoform f 
SEPT9                 0.607   septin 9 isoform e 
SEPT9                 0.607   septin 9 isoform b 
SEPT9                 0.607   septin 9 isoform e 
SEPT9                 0.607   septin 9 isoform a 
SEPT9                 0.607   septin 9 isoform c 
SEPT12                0.528   septin 12 isoform 2 
SEPT4                 0.411   septin 4 isoform 1 
SEPT4                 0.411   septin 4 isoform 3 
SEPT7                 0.403   cell division cycle 10 isoform 2 
SEPT7                 0.400   cell division cycle 10 isoform 1 
SEPT5                 0.398   septin 5 
SEPT12                0.394   septin 12 isoform 1 
SEPT2                 0.380   septin 2 
SEPT2                 0.380   septin 2 
SEPT2                 0.380   septin 2 
SEPT2                 0.380   septin 2 
SEPT1                 0.360   septin 1 
SEPT11                0.344   septin 11 
SEPT8                 0.336   septin 8 isoform c 
SEPT8                 0.336   septin 8 isoform a 
SEPT8                 0.336   septin 8 isoform b 
SEPT10                0.326   septin 10 isoform 2 
SEPT10                0.326   septin 10 isoform 1 
SEPT6                 0.320   septin 6 isoform B 
SEPT6                 0.320   septin 6 isoform D 
SEPT6                 0.320   septin 6 isoform A 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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