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Search of human proteins with 55741653
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|55741653 hypothetical protein LOC57691 [Homo sapiens]
(787 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|55741653 hypothetical protein LOC57691 [Homo sapiens] 1581 0.0
gi|149773449 zinc finger protein 862 [Homo sapiens] 135 1e-31
gi|72255574 zinc finger protein 451 isoform 2 [Homo sapiens] 114 4e-25
gi|72255571 zinc finger protein 451 isoform 1 [Homo sapiens] 114 4e-25
gi|46195755 SCAN domain containing 3 [Homo sapiens] 55 3e-07
gi|115511046 zinc finger protein 258 [Homo sapiens] 43 0.001
gi|28916698 transposon-derived Buster3 transposase-like [Homo sa... 43 0.001
gi|223633919 hypothetical protein LOC285550 [Homo sapiens] 41 0.005
gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens] 37 0.054
gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens] 37 0.054
gi|40807471 transcription termination factor, RNA polymerase II ... 36 0.16
gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens] 35 0.21
gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens] 35 0.21
gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens] 35 0.21
gi|21495178 hypothetical protein LOC221786 [Homo sapiens] 35 0.21
gi|31559815 keratin 26 [Homo sapiens] 35 0.27
gi|4502435 BMX non-receptor tyrosine kinase [Homo sapiens] 34 0.46
gi|42544182 BMX non-receptor tyrosine kinase [Homo sapiens] 34 0.46
gi|167466187 integrin-binding sialoprotein precursor [Homo sapiens] 33 0.79
gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens] 33 1.0
gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens] 33 1.0
gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens] 33 1.0
gi|30025026 osteopetrosis associated transmembrane protein 1 [Ho... 32 1.8
gi|212549576 zinc finger protein LOC654254 [Homo sapiens] 32 1.8
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 32 1.8
gi|44889475 RAB6 interacting protein 1 [Homo sapiens] 32 2.3
gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ... 32 2.3
gi|215490011 small inducible cytokine subfamily E, member 1 isof... 32 3.0
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 32 3.0
gi|52630419 sterol regulatory element binding transcription fact... 31 3.9
>gi|55741653 hypothetical protein LOC57691 [Homo sapiens]
Length = 787
Score = 1581 bits (4094), Expect = 0.0
Identities = 787/787 (100%), Positives = 787/787 (100%)
Query: 1 MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYY 60
MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYY
Sbjct: 1 MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYY 60
Query: 61 SDILFPKMPKRQGDFLHFLNVKKVKTDTENNEVSKNHCRLSKAKEPHFEYIEQPIIEEKP 120
SDILFPKMPKRQGDFLHFLNVKKVKTDTENNEVSKNHCRLSKAKEPHFEYIEQPIIEEKP
Sbjct: 61 SDILFPKMPKRQGDFLHFLNVKKVKTDTENNEVSKNHCRLSKAKEPHFEYIEQPIIEEKP 120
Query: 121 SLSSKKEIDNLVLPDCWNEKQAFMFTEQYKWLEIKEGKLGCKDCSAVRHLGSKAEKHVHV 180
SLSSKKEIDNLVLPDCWNEKQAFMFTEQYKWLEIKEGKLGCKDCSAVRHLGSKAEKHVHV
Sbjct: 121 SLSSKKEIDNLVLPDCWNEKQAFMFTEQYKWLEIKEGKLGCKDCSAVRHLGSKAEKHVHV 180
Query: 181 SKEWIAYLVTPNGSNKTTRQASLRKKIREHDVSKAHGKIQDLLKESTNDSICNLVHKQNN 240
SKEWIAYLVTPNGSNKTTRQASLRKKIREHDVSKAHGKIQDLLKESTNDSICNLVHKQNN
Sbjct: 181 SKEWIAYLVTPNGSNKTTRQASLRKKIREHDVSKAHGKIQDLLKESTNDSICNLVHKQNN 240
Query: 241 KNIDATVKVFNTVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTRYSATRIAEHIAKEMK 300
KNIDATVKVFNTVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTRYSATRIAEHIAKEMK
Sbjct: 241 KNIDATVKVFNTVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTRYSATRIAEHIAKEMK 300
Query: 301 MKIFKNIIEENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVSTIAE 360
MKIFKNIIEENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVSTIAE
Sbjct: 301 MKIFKNIIEENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVSTIAE 360
Query: 361 CIVNTLLTTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWNCLN 420
CIVNTLLTTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWNCLN
Sbjct: 361 CIVNTLLTTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWNCLN 420
Query: 421 HRLQLSLDDSISEIKQINHLKIFIDKIYSIYHQPNKNQTKLLGTVAKELETEIIKIGRVM 480
HRLQLSLDDSISEIKQINHLKIFIDKIYSIYHQPNKNQTKLLGTVAKELETEIIKIGRVM
Sbjct: 421 HRLQLSLDDSISEIKQINHLKIFIDKIYSIYHQPNKNQTKLLGTVAKELETEIIKIGRVM 480
Query: 481 GPRWAACSLQAATAVWHAYPILYMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLS 540
GPRWAACSLQAATAVWHAYPILYMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLS
Sbjct: 481 GPRWAACSLQAATAVWHAYPILYMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLS 540
Query: 541 TALQSRSTNIKKAQKLIKRTIRALENLKIGTGKYESQIEDLIKSDKFKDIPFNKNNKFNA 600
TALQSRSTNIKKAQKLIKRTIRALENLKIGTGKYESQIEDLIKSDKFKDIPFNKNNKFNA
Sbjct: 541 TALQSRSTNIKKAQKLIKRTIRALENLKIGTGKYESQIEDLIKSDKFKDIPFNKNNKFNA 600
Query: 601 LPRSILLDNIIQHMNLRLLSDRNHEDIFNYFDLLEPSTWPYEEITSPWIAGEKTLFHLCK 660
LPRSILLDNIIQHMNLRLLSDRNHEDIFNYFDLLEPSTWPYEEITSPWIAGEKTLFHLCK
Sbjct: 601 LPRSILLDNIIQHMNLRLLSDRNHEDIFNYFDLLEPSTWPYEEITSPWIAGEKTLFHLCK 660
Query: 661 ILKYEVDLNDFREFVNNNIKSNNVSIPTTIYKAKKIVSTIAINSAEAERGFNLMNIICTR 720
ILKYEVDLNDFREFVNNNIKSNNVSIPTTIYKAKKIVSTIAINSAEAERGFNLMNIICTR
Sbjct: 661 ILKYEVDLNDFREFVNNNIKSNNVSIPTTIYKAKKIVSTIAINSAEAERGFNLMNIICTR 720
Query: 721 VRNSLTIDHVSDLMTINLLGKELADWDATPFVKSWSNCNHRLATDTRVRQKSTKVFHENQ 780
VRNSLTIDHVSDLMTINLLGKELADWDATPFVKSWSNCNHRLATDTRVRQKSTKVFHENQ
Sbjct: 721 VRNSLTIDHVSDLMTINLLGKELADWDATPFVKSWSNCNHRLATDTRVRQKSTKVFHENQ 780
Query: 781 LAIWNLK 787
LAIWNLK
Sbjct: 781 LAIWNLK 787
>gi|149773449 zinc finger protein 862 [Homo sapiens]
Length = 1169
Score = 135 bits (341), Expect = 1e-31
Identities = 146/659 (22%), Positives = 270/659 (40%), Gaps = 94/659 (14%)
Query: 148 QYKWLEI--KEGKLGCKDCSAVRHLGSKAEKHVHVSKEWIAYLVTPNGSNKTTRQASLRK 205
Q+ WL I KE KL C C +L K+ + V Y G K +
Sbjct: 472 QFPWLVIDPKETKLFCSACIERPNLHDKSSRLVR------GY----TGPFKV-------E 514
Query: 206 KIREHDVSKAHGKIQDLLKESTNDSICNLVHKQNNKNIDATVKVFNTVYSLVKHNRPLSD 265
++ H+VSKAH + ++ + LV + ++ + FN YS+ H+RPL+D
Sbjct: 515 TLKYHEVSKAHRLCVNTVEIKEDTPHTALVPEISSDLMANMEHFFNAAYSIAYHSRPLND 574
Query: 266 IEGARELQEKNGEV--NCLNTRYSATRIAEHIAKEMKMKIFKNIIEENAKICIIIDEAST 323
E +L + G V R + T+ ++I++ +K +I +++ + + +++D ++
Sbjct: 575 FEKILQLLQSTGTVILGKYRNRTACTQFIKYISETLKREILEDV-RNSPCVSVLLDSSTD 633
Query: 324 VSKKTTLVIYLQCTIQSAPAPVMLFVALKELVSTIAECIVNTLLTTLNDCGFTNEYLKAN 383
S++ + IY++ Q ++ L L S A+ T+++ L++ + K
Sbjct: 634 ASEQACVGIYIRYFKQMEVKES--YITLAPLYSETADGYFETIVSALDELDIP--FRKPG 689
Query: 384 LIAFCSDGANTILGRKSGVATKLLENFPEIIIWNCLNHRLQLSLDDSISEIKQINHLKIF 443
+ + +L + G+ K E P+++ +C+ HRL L++ D+ I +
Sbjct: 690 WVVGLGTDGSAMLSCRGGLVEKFQEVIPQLLPVHCVAHRLHLAVVDACGSIDLVKKCDRH 749
Query: 444 IDKIYSIYHQPNKNQTKLLGTVAKELETEIIKIGRVMGPRWAACSLQAATAVWHAYPILY 503
I ++ Y NK +L A LE EII++ + RW A + A+ ++P L
Sbjct: 750 IRTVFKFYQSSNKRLNELQEGAA-PLEQEIIRLKDLNAVRWVASRRRTLHALLVSWPALA 808
Query: 504 MH----------FSHSYSGLAKRLANINFLQDLALMIDILEEFSVLSTALQSRSTNIKKA 553
H H G+ K + +F++ ++D L + LS Q I +
Sbjct: 809 RHLQRVAEAGGQIGHRAKGMLKLMRGFHFVKFCHFLLDFLSIYRPLSEVCQKEIVLITEV 868
Query: 554 QKLIKRTIRALENLKIGTGKYESQIEDLIKSDKFKDIPFNK----NNKFNALPRSILLDN 609
+ R ALE+L+ G E + K + I +K +F A +L
Sbjct: 869 NATLGRAYVALESLRHQAGPKEEEFNASFKDGRLHGICLDKLEVAEQRFQADRERTVLTG 928
Query: 610 IIQHMNLRLLSDR------------------------NHEDIFN---YFDLLEPSTWPYE 642
I+++ R +DR ++DI N YF+ P+ + E
Sbjct: 929 -IEYLQQRFDADRPPQLKNMEVFDTMAWPSGIELASFGNDDILNLARYFECSLPTGYSEE 987
Query: 643 EITSPWIAGEKTLFH------LCKILKYEVDLNDFREFVNNNIKSNNVSIPTTIYKAKKI 696
+ W+ G KT+ LCK N + + P + K +
Sbjct: 988 ALLEEWL-GLKTIAQHLPFSMLCK-----------------NALAQHCRFP-LLSKLMAV 1028
Query: 697 VSTIAINSAEAERGFNLMNIICTRVRNSLTIDHVSDLMTINLLGKELADWDATPFVKSW 755
V + I+++ ERGF MN I T R L+ + ++ LM + G + ++D P ++ W
Sbjct: 1029 VVCVPISTSCCERGFKAMNRIRTDERTKLSNEVLNMLMMTAVNGVAVTEYDPQPAIQHW 1087
>gi|72255574 zinc finger protein 451 isoform 2 [Homo sapiens]
Length = 1013
Score = 114 bits (285), Expect = 4e-25
Identities = 55/62 (88%), Positives = 56/62 (90%)
Query: 1 MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYY 60
MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGP RPVLEYIDLV DDE PS Y
Sbjct: 1 MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGPLRPVLEYIDLVSSDDEEPSTSY 60
Query: 61 SD 62
+D
Sbjct: 61 TD 62
>gi|72255571 zinc finger protein 451 isoform 1 [Homo sapiens]
Length = 1061
Score = 114 bits (285), Expect = 4e-25
Identities = 55/62 (88%), Positives = 56/62 (90%)
Query: 1 MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYY 60
MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGP RPVLEYIDLV DDE PS Y
Sbjct: 1 MGDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGPLRPVLEYIDLVSSDDEEPSTSY 60
Query: 61 SD 62
+D
Sbjct: 61 TD 62
>gi|46195755 SCAN domain containing 3 [Homo sapiens]
Length = 1325
Score = 55.1 bits (131), Expect = 3e-07
Identities = 103/460 (22%), Positives = 190/460 (41%), Gaps = 53/460 (11%)
Query: 288 ATRIAEHIAKEMKMKIFKNIIEENAK-ICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVM 346
A RI E +A +M+ ++ + I + AK + +DE ++ L++Y++
Sbjct: 875 ARRIQE-LANDMEDQLIEQI--KLAKYFSLQLDECRDIANMIILLVYVRFEHDDDIKEEF 931
Query: 347 LFVALKELVSTIAECIVNTLLTTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKL 406
F A +T +E +N CG ++ + CSDGA ++ G+ S V T++
Sbjct: 932 FFSASLPTNTTSSELYEAVKNYIVNKCGLEFKFC----VGVCSDGAASMTGKHSEVVTQI 987
Query: 407 LENFPEIIIWNCLNHRLQLSLDDSISEIKQINHLKIFIDKIYSIYHQPNKNQTKLLGTVA 466
E PE +C HR L++ +E +N + I KI + Y + N ++L +
Sbjct: 988 KELAPECKTTHCFIHRESLAMKKISAE---LNSVLNDIVKIVN-YIKSNSLNSRLFSLLC 1043
Query: 467 KELETEIIKIGRVMGPRWAACSLQAATAVWHAYPILYMHFSHSYSGLAKRLANINFLQDL 526
+E + ++ RW + + + ++ L + ++ ++N+ L
Sbjct: 1044 DNMEADHKQLLLHAEIRWLSRG-KVLSRMFEIRNELLVFLQGKKPMWSQLFKDVNWTARL 1102
Query: 527 ALMIDILEEFSVLSTALQSR-STNIKKAQKL--IKRTIRALENLKIGTGKYESQIEDLIK 583
A + DI F+ L+ ++Q + +T A K+ K+ + A +N +I T Y
Sbjct: 1103 AYLSDIFSIFNDLNASMQGKNATYFSMADKVEGQKQKLEAWKN-RISTDCY--------- 1152
Query: 584 SDKFKDIPFNKNNKFNALPRSILLDNIIQHMNLRLLSDRNHEDIFNYFDLLEPSTWPYEE 643
D F ++ N N L + L I +H+ L E YF E
Sbjct: 1153 -DMFHNLTTIINEVGNDLDIAHLRKVISEHLTNLL------ECFEFYFPSKEDPRIGNLW 1205
Query: 644 ITSPWIAGEK----TLFHLCKILKYEVDLNDFREFVNNNIKSNNVSIPTTIYKAKKIVST 699
I +P+++ + T+ K+LK D F N S+P+ KAK
Sbjct: 1206 IQNPFLSSKDNLNLTVTLQDKLLKLATDEGLKISF------ENTASLPSFWIKAKNDYPE 1259
Query: 700 IAINSAE----------AERGFNLMNIICTRVRNSLTIDH 729
+A + + E GF+ +++I T+ RNSL I +
Sbjct: 1260 LAEIALKLLLLFPSTYLCETGFSTLSVIKTKHRNSLNIHY 1299
>gi|115511046 zinc finger protein 258 [Homo sapiens]
Length = 1325
Score = 43.1 bits (100), Expect = 0.001
Identities = 56/269 (20%), Positives = 112/269 (41%), Gaps = 30/269 (11%)
Query: 293 EHIAKEMKMKIFKNIIE---ENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFV 349
+H E+ I +I+ E+ + IDE+S +S T L+ Y++ +
Sbjct: 884 QHRIDELSADIEDQLIQKVRESKWFALQIDESSEISNITLLLCYIR----------FIDY 933
Query: 350 ALKELVSTIAECI-VNTLLTTLNDCGFTNEYLKA------NLIAFCSDGANTILGRKSGV 402
+++ + CI + T +T N+Y+ + + + C+DGA ++ GR SG+
Sbjct: 934 DCRDVKEELLFCIEMPTQITGFEIFELINKYIDSKSLNWKHCVGLCTDGAASMTGRYSGL 993
Query: 403 ATKLLE-NFPEIIIWNCLNHRLQLSLDDSISEIKQINHLKIFIDKIYSIYHQPNKNQTKL 461
K+ E +C HR +L + ++ H + + + N +++
Sbjct: 994 KAKIQEVAMNTAAFTHCFIHRERLVAE----KLSPCLHKILLQSAQILSFIKSNALNSRM 1049
Query: 462 LGTVAKELETEIIKIGRVMGPRWAACS--LQAATAVWHAYPILYMHFSHSYSGLAKRLAN 519
L + +E+ +E + + RW + L+ + H I S +S LAK +
Sbjct: 1050 LTILCEEMGSEHVSLPLHAEVRWISRGRMLKRLFELRHEIEIF---LSQKHSDLAKYFHD 1106
Query: 520 INFLQDLALMIDILEEFSVLSTALQSRST 548
++ LA + DI + L+ +LQ T
Sbjct: 1107 EEWVGKLAYLSDIFSLINELNLSLQGTLT 1135
>gi|28916698 transposon-derived Buster3 transposase-like [Homo
sapiens]
Length = 594
Score = 42.7 bits (99), Expect = 0.001
Identities = 41/183 (22%), Positives = 73/183 (39%), Gaps = 21/183 (11%)
Query: 388 CSDGANTILGRKSGVATKLLENFPEIIIWNCL--NHRLQLSL------DDSISEIKQINH 439
C+DGA+++LG S + + P I++ +CL H L + D + ++ IN
Sbjct: 241 CTDGASSMLGENSEFVAYVKKEIPHIVVTHCLLNPHALVIKTLPTKLRDALFTVVRVINF 300
Query: 440 LKIFIDKIYSIYHQPNKNQTKLLGTVAKELETEIIKIGRVMGPRWAACSLQAATAVWHAY 499
+K PN +L +E+ E + RW + Q T ++ Y
Sbjct: 301 IK---------GRAPNH---RLFQAFFEEIGIEYSVLLFHTEMRWLSRG-QILTHIFEMY 347
Query: 500 PILYMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLSTALQSRSTNIKKAQKLIKR 559
+ H S L N F LA + D+ + + LS ++Q N A++ +
Sbjct: 348 EEINQFLHHKSSNLVDGFENKEFKIHLAYLADLFKHLNELSASMQRTGMNTVSAREKLSA 407
Query: 560 TIR 562
+R
Sbjct: 408 FVR 410
>gi|223633919 hypothetical protein LOC285550 [Homo sapiens]
Length = 657
Score = 40.8 bits (94), Expect = 0.005
Identities = 59/263 (22%), Positives = 109/263 (41%), Gaps = 19/263 (7%)
Query: 291 IAEHIAKEMKMKIFKNIIEENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVA 350
IAEH+ + ++ I I +DE++ + TTL++Y++ Q F+
Sbjct: 207 IAEHLETMLITRLQSGI-----DFAIQLDESTDIGSCTTLLVYVRYAWQDDFLED--FLC 259
Query: 351 LKELVSTIAECIVNTLLTTLNDCGFTNEYLK--ANLIAFCSDGANTILGRKSGVATKLLE 408
L S ++ + T L + +Y N SDG T+ G+ S V KLLE
Sbjct: 260 FLNLTSHLSGLDIFTEL----ERRIVGQYKLNWKNCKGITSDGTATMTGKHSRVIKKLLE 315
Query: 409 NFPEIIIWN-CLNHRLQLSLDDSISEIKQINHLKIFIDKIYSIYHQPNKNQTKLLGTVAK 467
+WN C HR L+ + + ++ LK + + I + + ++LL T
Sbjct: 316 VTNNGAVWNHCFIHREGLASREIPQNLMEV--LKNAVKVVNFI--KGSSLNSRLLETFCS 371
Query: 468 ELETEIIKIGRVMGPRWAACSLQAATAVWHAYPILYMHFSHSYSGLAKRLANINFLQDLA 527
E+ T + RW + + + V+ ++ S LA + ++ LA
Sbjct: 372 EIGTNHTHLLYHTKIRWLSQG-KILSRVYELRNEIHFFLIEKKSHLASIFEDDTWVTKLA 430
Query: 528 LMIDILEEFSVLSTALQSRSTNI 550
+ DI + LS LQ +++++
Sbjct: 431 YLTDIFSILNELSLKLQGKNSDV 453
>gi|219521826 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 37.4 bits (85), Expect = 0.054
Identities = 70/382 (18%), Positives = 148/382 (38%), Gaps = 63/382 (16%)
Query: 192 NGSNKTTRQASLRKKIREHDVSKAHGKIQDLLKESTNDSICNLVHKQNNKNIDATVKVFN 251
N N++ +AS +AH + L+K D + + +Q +K IDA
Sbjct: 187 NTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAV----- 241
Query: 252 TVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTRYSATRIAEHIAKEMKMKIFKNIIEEN 311
LS+ AR +++ +A I +E+ ++
Sbjct: 242 ----------QLSNSTVARRIKD----------------LAADIEEELVCRL-------- 267
Query: 312 AKIC----IIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVSTIAECIVNTLL 367
KIC + +DE++ VS L+++++ + +L + +T E +
Sbjct: 268 -KICDGFSLQLDESADVSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEE-----IF 321
Query: 368 TTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWNCLNHRLQLSL 427
+N +E + CSD + + G+ + T + PE +CL +R L++
Sbjct: 322 NCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAV 381
Query: 428 DDSISEIKQINHLKIFIDKIYSI--YHQPNKNQTKLLGTVAKELETEIIKIGRVMGPRWA 485
+ +K + +D+ I Y + +Q++LL + +E+ + + RW
Sbjct: 382 KIMPTSLKNV------LDQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRW- 434
Query: 486 ACSLQAATAVWHAYPIL--YMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLSTAL 543
L + + + + F S L+ L N ++L LA + DI + + ++ ++
Sbjct: 435 ---LSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKLNEVNLSM 491
Query: 544 QSRSTNIKKAQKLIKRTIRALE 565
Q ++ + + +R LE
Sbjct: 492 QGKNVTVFTVFDKMSSLLRKLE 513
>gi|49574210 zinc finger, BED-type containing 5 [Homo sapiens]
Length = 693
Score = 37.4 bits (85), Expect = 0.054
Identities = 70/382 (18%), Positives = 148/382 (38%), Gaps = 63/382 (16%)
Query: 192 NGSNKTTRQASLRKKIREHDVSKAHGKIQDLLKESTNDSICNLVHKQNNKNIDATVKVFN 251
N N++ +AS +AH + L+K D + + +Q +K IDA
Sbjct: 187 NTDNESATEASYNVSYHIALSGEAHTIGELLIKPCAKDVVMRMFDEQYSKKIDAV----- 241
Query: 252 TVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTRYSATRIAEHIAKEMKMKIFKNIIEEN 311
LS+ AR +++ +A I +E+ ++
Sbjct: 242 ----------QLSNSTVARRIKD----------------LAADIEEELVCRL-------- 267
Query: 312 AKIC----IIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVSTIAECIVNTLL 367
KIC + +DE++ VS L+++++ + +L + +T E +
Sbjct: 268 -KICDGFSLQLDESADVSGLAVLLVFVRYRFNKSIEEDLLLCESLQSNATGEE-----IF 321
Query: 368 TTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWNCLNHRLQLSL 427
+N +E + CSD + + G+ + T + PE +CL +R L++
Sbjct: 322 NCINSFMQKHEIEWEKCVDVCSDASRAVDGKIAEAVTLIKYVAPESTSSHCLLYRHALAV 381
Query: 428 DDSISEIKQINHLKIFIDKIYSI--YHQPNKNQTKLLGTVAKELETEIIKIGRVMGPRWA 485
+ +K + +D+ I Y + +Q++LL + +E+ + + RW
Sbjct: 382 KIMPTSLKNV------LDQAVQIINYIKARPHQSRLLKILCEEMGAQHTALLLNTEVRW- 434
Query: 486 ACSLQAATAVWHAYPIL--YMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLSTAL 543
L + + + + F S L+ L N ++L LA + DI + + ++ ++
Sbjct: 435 ---LSRGKVLVRLFELRRELLVFMDSAFRLSDCLTNSSWLLRLAYLADIFTKLNEVNLSM 491
Query: 544 QSRSTNIKKAQKLIKRTIRALE 565
Q ++ + + +R LE
Sbjct: 492 QGKNVTVFTVFDKMSSLLRKLE 513
>gi|40807471 transcription termination factor, RNA polymerase II
[Homo sapiens]
Length = 1162
Score = 35.8 bits (81), Expect = 0.16
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 4 PGSEIIESVPPA-------GPEASESTTDENEDDIQFVSEGPSRPVL 43
PG ++ P A G EA+ S+ DE EDD+ FVS P P+L
Sbjct: 325 PGGPAAQAAPAAPGLSLGEGREAATSSDDEEEDDVVFVSSKPGSPLL 371
>gi|239756829 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 35.4 bits (80), Expect = 0.21
Identities = 76/358 (21%), Positives = 133/358 (37%), Gaps = 40/358 (11%)
Query: 245 ATVKVFNTVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTR----YSATRIAE---HIAK 297
A V V TVY + K + P ELQ N L T YS R+ + IA
Sbjct: 127 AKVAVLTTVYCMAKEDVPNDRCSALLELQRFNLCQALLGTEHGDYYSPRRVRDMQVAIAS 186
Query: 298 EMKMKIFKNIIEENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVST 357
+ + + ++ + + +++DE + +L ++ P F+ EL
Sbjct: 187 VLHTEACQR-LKASPYVGLVLDETRDWPESHSLALFATSVSPCDGQPATTFLGSVELQE- 244
Query: 358 IAECIVNTLLTTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWN 417
E LL L G + A +A+ S + R V +L P + +
Sbjct: 245 -GEATAGQLLDILQAFG-----VSAPKLAWLSSSLPS--ERLGSVGPQLRATCPLLAELH 296
Query: 418 CLNHRLQLSLDDSISEIKQINHLKIFIDKIYSIYHQPNKNQTKLLGTVAKELETEIIKIG 477
CL R + + + I +D ++ ++ P+ + L+ + L+ I +
Sbjct: 297 CLPGRTDPEPPAYLGQYESI------LDALFRLHGGPSSH---LVPELRAALDLAAIDLA 347
Query: 478 RVMGPR---WAACSLQAATAVWHAYPILYMHF------SHSYSGLAKRLANINFLQDLAL 528
GPR WA+ L AV A+P L S LA L F+ L
Sbjct: 348 ---GPRPVPWASL-LPVVEAVAEAWPGLVPTLEAAALASPVAGSLALALRQFTFVAFTHL 403
Query: 529 MIDILEEFSVLSTALQSRSTNIKKAQKLIKRTIRALENLK-IGTGKYESQIEDLIKSD 585
++D L LS LQ+ ++ Q L+ +L+ + G + + +++L D
Sbjct: 404 LLDALPSVQKLSLVLQAEEPDLALLQPLVMAAAASLQAQRGSGGARLQGFLQELASMD 461
>gi|239751322 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 35.4 bits (80), Expect = 0.21
Identities = 76/358 (21%), Positives = 133/358 (37%), Gaps = 40/358 (11%)
Query: 245 ATVKVFNTVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTR----YSATRIAE---HIAK 297
A V V TVY + K + P ELQ N L T YS R+ + IA
Sbjct: 127 AKVAVLTTVYCMAKEDVPNDRCSALLELQRFNLCQALLGTEHGDYYSPRRVRDMQVAIAS 186
Query: 298 EMKMKIFKNIIEENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVST 357
+ + + ++ + + +++DE + +L ++ P F+ EL
Sbjct: 187 VLHTEACQR-LKASPYVGLVLDETRDWPESHSLALFATSVSPCDGQPATTFLGSVELQE- 244
Query: 358 IAECIVNTLLTTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWN 417
E LL L G + A +A+ S + R V +L P + +
Sbjct: 245 -GEATAGQLLDILQAFG-----VSAPKLAWLSSSLPS--ERLGSVGPQLRATCPLLAELH 296
Query: 418 CLNHRLQLSLDDSISEIKQINHLKIFIDKIYSIYHQPNKNQTKLLGTVAKELETEIIKIG 477
CL R + + + I +D ++ ++ P+ + L+ + L+ I +
Sbjct: 297 CLPGRTDPEPPAYLGQYESI------LDALFRLHGGPSSH---LVPELRAALDLAAIDLA 347
Query: 478 RVMGPR---WAACSLQAATAVWHAYPILYMHF------SHSYSGLAKRLANINFLQDLAL 528
GPR WA+ L AV A+P L S LA L F+ L
Sbjct: 348 ---GPRPVPWASL-LPVVEAVAEAWPGLVPTLEAAALASPVAGSLALALRQFTFVAFTHL 403
Query: 529 MIDILEEFSVLSTALQSRSTNIKKAQKLIKRTIRALENLK-IGTGKYESQIEDLIKSD 585
++D L LS LQ+ ++ Q L+ +L+ + G + + +++L D
Sbjct: 404 LLDALPSVQKLSLVLQAEEPDLALLQPLVMAAAASLQAQRGSGGARLQGFLQELASMD 461
>gi|239745821 PREDICTED: zinc finger protein 385C [Homo sapiens]
Length = 1082
Score = 35.4 bits (80), Expect = 0.21
Identities = 76/358 (21%), Positives = 133/358 (37%), Gaps = 40/358 (11%)
Query: 245 ATVKVFNTVYSLVKHNRPLSDIEGARELQEKNGEVNCLNTR----YSATRIAE---HIAK 297
A V V TVY + K + P ELQ N L T YS R+ + IA
Sbjct: 127 AKVAVLTTVYCMAKEDVPNDRCSALLELQRFNLCQALLGTEHGDYYSPRRVRDMQVAIAS 186
Query: 298 EMKMKIFKNIIEENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKELVST 357
+ + + ++ + + +++DE + +L ++ P F+ EL
Sbjct: 187 VLHTEACQR-LKASPYVGLVLDETRDWPESHSLALFATSVSPCDGQPATTFLGSVELQE- 244
Query: 358 IAECIVNTLLTTLNDCGFTNEYLKANLIAFCSDGANTILGRKSGVATKLLENFPEIIIWN 417
E LL L G + A +A+ S + R V +L P + +
Sbjct: 245 -GEATAGQLLDILQAFG-----VSAPKLAWLSSSLPS--ERLGSVGPQLRATCPLLAELH 296
Query: 418 CLNHRLQLSLDDSISEIKQINHLKIFIDKIYSIYHQPNKNQTKLLGTVAKELETEIIKIG 477
CL R + + + I +D ++ ++ P+ + L+ + L+ I +
Sbjct: 297 CLPGRTDPEPPAYLGQYESI------LDALFRLHGGPSSH---LVPELRAALDLAAIDLA 347
Query: 478 RVMGPR---WAACSLQAATAVWHAYPILYMHF------SHSYSGLAKRLANINFLQDLAL 528
GPR WA+ L AV A+P L S LA L F+ L
Sbjct: 348 ---GPRPVPWASL-LPVVEAVAEAWPGLVPTLEAAALASPVAGSLALALRQFTFVAFTHL 403
Query: 529 MIDILEEFSVLSTALQSRSTNIKKAQKLIKRTIRALENLK-IGTGKYESQIEDLIKSD 585
++D L LS LQ+ ++ Q L+ +L+ + G + + +++L D
Sbjct: 404 LLDALPSVQKLSLVLQAEEPDLALLQPLVMAAAASLQAQRGSGGARLQGFLQELASMD 461
>gi|21495178 hypothetical protein LOC221786 [Homo sapiens]
Length = 573
Score = 35.4 bits (80), Expect = 0.21
Identities = 61/276 (22%), Positives = 112/276 (40%), Gaps = 49/276 (17%)
Query: 295 IAKEMKMKIFKNIIEENAKICIIIDEASTVSKKTTLVIYLQCTIQSAPAPVMLFVALKEL 354
IAK ++ + + + I +DE++ ++ TL++Y++ +V +
Sbjct: 122 IAKHLEAMLITRL-QSGIDFAIQLDESTDIASCPTLLVYVR------------YVWQDDF 168
Query: 355 VSTIAECI-VNT------LLTTLNDCGFTNEYLK-ANLIAFCSDGANTILGRKSGVATKL 406
V + C+ +N+ L T L +C L + SDG + G+ S + KL
Sbjct: 169 VEDLLCCLNLNSHITGLDLFTELENCLLGQYKLNWKHCKGISSDGTANMTGKHSRLTEKL 228
Query: 407 LENFPEIIIWN-CLNHRLQL-------SLDDSI-SEIKQINHLK--IFIDKIYSIY-HQP 454
LE +WN C HR L SL D + + +K +N +K ++ I+ +
Sbjct: 229 LEATHNNAVWNHCFIHREALVSKEISPSLMDVLKNAVKTVNFIKGSSLNSRLLEIFCSEI 288
Query: 455 NKNQTKLLGTVAKELETEIIKIGRVMGPRWAACSLQAATAVWHAYPILYMHFSHSYSGLA 514
N T LL TE+ RW + + + V+ +Y+ S LA
Sbjct: 289 GVNHTHLL------FHTEV---------RWLSQG-KVLSRVYELRNEIYIFLVEKQSHLA 332
Query: 515 KRLANINFLQDLALMIDILEEFSVLSTALQSRSTNI 550
+ ++ LA + DI + LS +Q ++ +I
Sbjct: 333 NIFEDDIWVTKLAYLSDIFGILNELSLKMQGKNNDI 368
>gi|31559815 keratin 26 [Homo sapiens]
Length = 468
Score = 35.0 bits (79), Expect = 0.27
Identities = 34/134 (25%), Positives = 56/134 (41%), Gaps = 11/134 (8%)
Query: 177 HVHVSKEWIAYLVTP-NGSNKTTRQASLRKKIREHDVSKAHGKIQDLLKESTNDSICNLV 235
HVH +E A L G + S R+ +HD S+ I+DL ++ T+ +ICN
Sbjct: 100 HVHALEEANADLEQKIKGRYEKCEPGSSRE--HDHDYSRYFSVIEDLKRQITSATICNAS 157
Query: 236 HKQNNKNIDATVKVFNTVY--SLVKHNRPLSDIEGARELQEK------NGEVNCLNTRYS 287
N N T F Y L H+ +D G R + ++ + E+ C
Sbjct: 158 IVLQNDNARLTADDFRLKYENELALHHSVEADTSGLRRVLDELTLCTTDLEIQCETLSEE 217
Query: 288 ATRIAEHIAKEMKM 301
T + + +EM++
Sbjct: 218 LTYLKKSHEEEMEV 231
>gi|4502435 BMX non-receptor tyrosine kinase [Homo sapiens]
Length = 675
Score = 34.3 bits (77), Expect = 0.46
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 7/192 (3%)
Query: 7 EIIESVPPAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYYSDILFP 66
+I +VP +A S+T + D + S+P L D + Y S F
Sbjct: 172 KIPRAVPVLKMDAPSSSTTLAQYDNESKKNYGSQPPSSSTSLAQYDSNSKKIYGSQPNFN 231
Query: 67 KMPKRQGDFLHFLNVKKVKTDTENNEVSKNHCRLSKAKEPHFEYIEQPIIEEKPSLSSKK 126
+ DF + V+K+K+ + + +V+ S KE + + I E P SS +
Sbjct: 232 MQYIPREDFPDWWQVRKLKSSSSSEDVAS-----SNQKERNVNHTTSKISWEFPESSSSE 286
Query: 127 EIDNLVLPDCWNEKQAFMFTEQYKWLEIKEGKLGCKDCSAV-RHLGSKAEKHVHVSKEWI 185
E +NL D + + +EQ + KEG ++ S V + S K V+ K +
Sbjct: 287 EEENLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTV 346
Query: 186 A-YLVTPNGSNK 196
Y V N NK
Sbjct: 347 KHYHVHTNAENK 358
>gi|42544182 BMX non-receptor tyrosine kinase [Homo sapiens]
Length = 675
Score = 34.3 bits (77), Expect = 0.46
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 7/192 (3%)
Query: 7 EIIESVPPAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYYSDILFP 66
+I +VP +A S+T + D + S+P L D + Y S F
Sbjct: 172 KIPRAVPVLKMDAPSSSTTLAQYDNESKKNYGSQPPSSSTSLAQYDSNSKKIYGSQPNFN 231
Query: 67 KMPKRQGDFLHFLNVKKVKTDTENNEVSKNHCRLSKAKEPHFEYIEQPIIEEKPSLSSKK 126
+ DF + V+K+K+ + + +V+ S KE + + I E P SS +
Sbjct: 232 MQYIPREDFPDWWQVRKLKSSSSSEDVAS-----SNQKERNVNHTTSKISWEFPESSSSE 286
Query: 127 EIDNLVLPDCWNEKQAFMFTEQYKWLEIKEGKLGCKDCSAV-RHLGSKAEKHVHVSKEWI 185
E +NL D + + +EQ + KEG ++ S V + S K V+ K +
Sbjct: 287 EEENLDDYDWFAGNISRSQSEQLLRQKGKEGAFMVRNSSQVGMYTVSLFSKAVNDKKGTV 346
Query: 186 A-YLVTPNGSNK 196
Y V N NK
Sbjct: 347 KHYHVHTNAENK 358
>gi|167466187 integrin-binding sialoprotein precursor [Homo sapiens]
Length = 317
Score = 33.5 bits (75), Expect = 0.79
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 5/103 (4%)
Query: 2 GDPGSEIIESVPPAGPEASESTTDENEDDIQFVSEGPSRPVLEYIDLVCGDDENPSAYYS 61
GD SE E E + ++D + + S L Y G+D P Y+
Sbjct: 71 GDDSSEEEEEEEETSNEGENNEESNEDEDSEAENTTLSATTLGY-----GEDATPGTGYT 125
Query: 62 DILFPKMPKRQGDFLHFLNVKKVKTDTENNEVSKNHCRLSKAK 104
+ ++PK+ GD + +K + E E N S+A+
Sbjct: 126 GLAAIQLPKKAGDITNKATKEKESDEEEEEEEEGNENEESEAE 168
>gi|110347418 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 33.1 bits (74), Expect = 1.0
Identities = 33/151 (21%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 152 LEIKEGKLGCKDCSAVRHLGSKAEKHVHVSKEWIAYLVTPNGSNKTTRQASLRKKIREHD 211
L IKE +L + + L + AEK+ + ++W KT L+ K+++
Sbjct: 688 LRIKENELRALE-EELAGLKNTAEKYRQLKQQW---------EMKTEEADLLQTKLQQSS 737
Query: 212 VSKAHGKIQDLLKESTNDSICNLVHKQNNKNIDATVKVFNTVYSLVKHNRPLSDIEGARE 271
K ++ D LK++ +S ++ KN + Y ++++ ++ E RE
Sbjct: 738 YHKQQEEL-DALKKTIEES------EETLKNTKEIQRKAEEKYEVLENKMKNAEAERERE 790
Query: 272 LQEKNGEVNCLNTRYSATRIAEHIAKEMKMK 302
L++ +++C T+ A+ +K+MK K
Sbjct: 791 LKDAQKKLDCAKTKADAS------SKKMKEK 815
>gi|110347425 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 33.1 bits (74), Expect = 1.0
Identities = 33/151 (21%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 152 LEIKEGKLGCKDCSAVRHLGSKAEKHVHVSKEWIAYLVTPNGSNKTTRQASLRKKIREHD 211
L IKE +L + + L + AEK+ + ++W KT L+ K+++
Sbjct: 688 LRIKENELRALE-EELAGLKNTAEKYRQLKQQW---------EMKTEEADLLQTKLQQSS 737
Query: 212 VSKAHGKIQDLLKESTNDSICNLVHKQNNKNIDATVKVFNTVYSLVKHNRPLSDIEGARE 271
K ++ D LK++ +S ++ KN + Y ++++ ++ E RE
Sbjct: 738 YHKQQEEL-DALKKTIEES------EETLKNTKEIQRKAEEKYEVLENKMKNAEAERERE 790
Query: 272 LQEKNGEVNCLNTRYSATRIAEHIAKEMKMK 302
L++ +++C T+ A+ +K+MK K
Sbjct: 791 LKDAQKKLDCAKTKADAS------SKKMKEK 815
>gi|110347420 structural maintenance of chromosomes 2 [Homo sapiens]
Length = 1197
Score = 33.1 bits (74), Expect = 1.0
Identities = 33/151 (21%), Positives = 68/151 (45%), Gaps = 23/151 (15%)
Query: 152 LEIKEGKLGCKDCSAVRHLGSKAEKHVHVSKEWIAYLVTPNGSNKTTRQASLRKKIREHD 211
L IKE +L + + L + AEK+ + ++W KT L+ K+++
Sbjct: 688 LRIKENELRALE-EELAGLKNTAEKYRQLKQQW---------EMKTEEADLLQTKLQQSS 737
Query: 212 VSKAHGKIQDLLKESTNDSICNLVHKQNNKNIDATVKVFNTVYSLVKHNRPLSDIEGARE 271
K ++ D LK++ +S ++ KN + Y ++++ ++ E RE
Sbjct: 738 YHKQQEEL-DALKKTIEES------EETLKNTKEIQRKAEEKYEVLENKMKNAEAERERE 790
Query: 272 LQEKNGEVNCLNTRYSATRIAEHIAKEMKMK 302
L++ +++C T+ A+ +K+MK K
Sbjct: 791 LKDAQKKLDCAKTKADAS------SKKMKEK 815
>gi|30025026 osteopetrosis associated transmembrane protein 1 [Homo
sapiens]
Length = 334
Score = 32.3 bits (72), Expect = 1.8
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 251 NTVYSLVKHNRPLSDIEGARE------LQEKNGEVNCLNTRYSATRIAEHIAKEMKMKIF 304
+TVY L N L+ E + LQ KN C N R + ++ ++ KM
Sbjct: 185 STVYFLNLFNHTLTCFEHNLQGNAHSLLQTKNYSEVCKNCREAYKTLSSLYSEMQKMNEL 244
Query: 305 KNIIEENAKICIIIDEASTVSKK 327
+N E +CI +++A +++K
Sbjct: 245 ENKAEPGTHLCIDVEDAMNITRK 267
>gi|212549576 zinc finger protein LOC654254 [Homo sapiens]
Length = 585
Score = 32.3 bits (72), Expect = 1.8
Identities = 33/134 (24%), Positives = 54/134 (40%), Gaps = 13/134 (9%)
Query: 135 DCWNEKQAFMFTEQYKWLEIKEGKLGCKDCSAVRHLGSKAEKH-VHVSKEWIAYLVTPNG 193
+C + + ++ +Y+ + E C++C + S KH VH ++ Y
Sbjct: 199 ECGKDFKWYLIFNEYEIIHTGEKPFTCEECGNIFTTSSNFAKHKVHTGEKSYKYEECGKA 258
Query: 194 SNKTTRQASLRKKIREHDVSKAH-----GKIQDLLKESTNDSICNLVHK-QNNKNIDATV 247
N R ++L K R H K GKI + S+N + +H +
Sbjct: 259 FN---RSSTLTKHKRIHAEEKPFTCEECGKI---ITSSSNVAKHKKIHTGEKLYKCQECG 312
Query: 248 KVFNTVYSLVKHNR 261
KVFN +L KHNR
Sbjct: 313 KVFNRSTTLTKHNR 326
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 32.3 bits (72), Expect = 1.8
Identities = 21/98 (21%), Positives = 53/98 (54%), Gaps = 7/98 (7%)
Query: 163 DCSAVRHLGSKAEKHVHVSKEWIAYLVTPNGSNKTTRQASLRKKIREHDVSKAHGKIQDL 222
D A R L S+ + +++ ++ I L++ + Q ++ + ++HD K ++++L
Sbjct: 2362 DLQASRELTSRLHEEINMKEQKIISLLS---GKEEAIQVAIAELRQQHD--KEIKELENL 2416
Query: 223 LKESTNDSICNLVHKQNNKNIDATVKVFNTVYSLVKHN 260
L + ++I ++ ++N K +D T ++ T+ ++ K N
Sbjct: 2417 LSQEEEENI--VLEEENKKAVDKTNQLMETLKTIKKEN 2452
>gi|44889475 RAB6 interacting protein 1 [Homo sapiens]
Length = 1287
Score = 32.0 bits (71), Expect = 2.3
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 539 LSTALQSRSTNIKKAQKLIKRTIRALEN---------LKIGTGKYESQIEDLIKSDKFKD 589
L T++ + T + +A+K I+ + +++ +KIG GKYE ++SD
Sbjct: 621 LRTSMYQKCTTVDEAEKAIELRLAKIDHTAIHPHLLDMKIGQGKYEPGFFPKLQSDVLST 680
Query: 590 IP-FNKNNKFNALPRSILLDNIIQHM-NLRLLSDRNHEDI 627
P NK K NA + D QH +LRL +D+ + I
Sbjct: 681 GPASNKWTKRNAPAQWRRKDRQKQHTEHLRLDNDQREKYI 720
>gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
[Homo sapiens]
Length = 406
Score = 32.0 bits (71), Expect = 2.3
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 12/124 (9%)
Query: 514 AKRLANINFLQDLALMIDILEEFSVLSTALQSRSTNIKKAQKL----IKRTIRALENLKI 569
A R+ N++F ++ ++ ++ T L S +T KK QKL +K ++ + K
Sbjct: 176 ADRILNMDFETEVDKILKVIPRDR--KTFLFS-ATMTKKVQKLQRAALKNPVKCAVSSKY 232
Query: 570 GTGKYESQIEDLIKSDKFKDIPFNKNNKFNALPRSILLDNIIQHMNLRLLSDRNHEDIFN 629
T + Q I S KFK NKF A RSILL + L D H D+
Sbjct: 233 QTVEKLQQYYIFIPS-KFKSKRLGSLNKFKAKARSILLATDVASRGL----DIPHVDVVV 287
Query: 630 YFDL 633
FD+
Sbjct: 288 NFDI 291
>gi|215490011 small inducible cytokine subfamily E, member 1 isoform
b precursor [Homo sapiens]
Length = 336
Score = 31.6 bits (70), Expect = 3.0
Identities = 30/143 (20%), Positives = 61/143 (42%), Gaps = 16/143 (11%)
Query: 492 ATAVWHAYPILYMHFSHSYSGLAKRLANINFLQDLALMIDILEEFSVLSTALQSRSTNIK 551
A AV + +M F + +A A + L+ D + E+ + ++
Sbjct: 4 AVAVSEPVVLRFMIFCRLLAKMANNDAVLKRLEQKGAEADQIIEYL-------KQQVSLL 56
Query: 552 KAQKLIKRTIRALENLKIGTGKYESQIEDLIK-------SDKFKDIPFNKNNKFNALPRS 604
K + +++ T+R + L++ K + +IE+L + + K IPF +A S
Sbjct: 57 KEKAILQATLREEKKLRVENAKLKKEIEELKQELIQAEIQNGVKQIPFPSGTPLHA--NS 114
Query: 605 ILLDNIIQHMNLRLLSDRNHEDI 627
++ +N+IQ + +S E I
Sbjct: 115 MVSENVIQSTAVTTVSSGTKEQI 137
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 31.6 bits (70), Expect = 3.0
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 549 NIKKAQKLIKRTIRALENLKIGTGKYESQ-------IEDLIKSDKFKDIPFNKNNKFNAL 601
+I+ AQ+L+ + + E L+I T + +S I L++ +K I FNK ++ NA
Sbjct: 268 SIQSAQELLAQEQKKKEELEIATSQLKSDLTSRDDLISKLVEENKNLQISFNKEHEENAY 327
Query: 602 PRSILL 607
RS ++
Sbjct: 328 LRSEIM 333
>gi|52630419 sterol regulatory element binding transcription factor
1 isoform a [Homo sapiens]
Length = 1177
Score = 31.2 bits (69), Expect = 3.9
Identities = 17/78 (21%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 649 IAGEKTLFHLCKILKYEVDLNDFREFVNNNIKSNNVSIPTTIYKAKKIVSTIAINSAEAE 708
+ G + + +L+ +D F + N +K N+S+ T ++K+K + ++ +
Sbjct: 380 VVGTEAKLNKSAVLRKAIDYIRFLQHSNQKLKQENLSLRTAVHKSKSLKDLVSACGSGGN 439
Query: 709 RGFNLMNIICTRVRNSLT 726
LM + T V ++LT
Sbjct: 440 TDV-LMEGVKTEVEDTLT 456
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.133 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,995,219
Number of Sequences: 37866
Number of extensions: 1201199
Number of successful extensions: 3694
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 3667
Number of HSP's gapped (non-prelim): 51
length of query: 787
length of database: 18,247,518
effective HSP length: 110
effective length of query: 677
effective length of database: 14,082,258
effective search space: 9533688666
effective search space used: 9533688666
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.