Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 5454052
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|5454052 stratifin [Homo sapiens]
(248 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|5454052 stratifin [Homo sapiens] 488 e-138
gi|208973244 tyrosine 3/tryptophan 5 -monooxygenase activation p... 340 7e-94
gi|208973242 tyrosine 3/tryptophan 5 -monooxygenase activation p... 340 7e-94
gi|208973240 tyrosine 3/tryptophan 5 -monooxygenase activation p... 340 7e-94
gi|208973238 tyrosine 3/tryptophan 5 -monooxygenase activation p... 340 7e-94
gi|21735625 tyrosine 3/tryptophan 5 -monooxygenase activation pr... 340 7e-94
gi|4507953 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 340 7e-94
gi|5803227 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 337 7e-93
gi|4507949 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase a... 328 3e-90
gi|21328448 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase ... 328 3e-90
gi|21464101 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase ... 320 7e-88
gi|4507951 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase a... 313 9e-86
gi|5803225 tyrosine 3/tryptophan 5 -monooxygenase activation pro... 294 4e-80
gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens] 36 0.027
gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens] 35 0.046
gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens] 35 0.046
gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens] 35 0.046
gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens] 35 0.046
gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens] 35 0.046
gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens] 35 0.046
gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens] 35 0.046
gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens] 35 0.046
gi|90186267 ankyrin repeat domain 55 isoform 1 [Homo sapiens] 33 0.23
gi|90186264 ankyrin repeat domain 55 isoform 2 [Homo sapiens] 33 0.23
gi|145309324 FH2 domain containing 1 [Homo sapiens] 32 0.39
gi|37059814 ETAA16 protein [Homo sapiens] 32 0.51
gi|221219020 NYD-SP11 protein [Homo sapiens] 31 0.88
gi|38788333 remodeling and spacing factor 1 [Homo sapiens] 30 2.0
gi|157502171 sorting nexin 19 [Homo sapiens] 30 2.0
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 29 3.3
>gi|5454052 stratifin [Homo sapiens]
Length = 248
Score = 488 bits (1255), Expect = e-138
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR
Sbjct: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY
Sbjct: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH
Sbjct: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGG 240
YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGG
Sbjct: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGG 240
Query: 241 EAPQEPQS 248
EAPQEPQS
Sbjct: 241 EAPQEPQS 248
>gi|208973244 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 340 bits (872), Expect = 7e-94
Identities = 175/246 (71%), Positives = 205/246 (83%), Gaps = 7/246 (2%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
M++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
V+SSIEQK+ EG+E+K REYREK+ETEL+ +C+ VL LL+ LI A AES+VFY
Sbjct: 61 VVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFY 118
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDYYRYLAEVA GDDKK I+D ++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 119 LKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 178
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGE--- 237
YEI NSPE+A SLAKT FDEA+A+L TLSE+SYKDSTLIMQLLRDNLTLWT+D G+
Sbjct: 179 YEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238
Query: 238 --EGGE 241
EGGE
Sbjct: 239 AGEGGE 244
>gi|208973242 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 340 bits (872), Expect = 7e-94
Identities = 175/246 (71%), Positives = 205/246 (83%), Gaps = 7/246 (2%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
M++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
V+SSIEQK+ EG+E+K REYREK+ETEL+ +C+ VL LL+ LI A AES+VFY
Sbjct: 61 VVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFY 118
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDYYRYLAEVA GDDKK I+D ++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 119 LKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 178
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGE--- 237
YEI NSPE+A SLAKT FDEA+A+L TLSE+SYKDSTLIMQLLRDNLTLWT+D G+
Sbjct: 179 YEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238
Query: 238 --EGGE 241
EGGE
Sbjct: 239 AGEGGE 244
>gi|208973240 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 340 bits (872), Expect = 7e-94
Identities = 175/246 (71%), Positives = 205/246 (83%), Gaps = 7/246 (2%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
M++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
V+SSIEQK+ EG+E+K REYREK+ETEL+ +C+ VL LL+ LI A AES+VFY
Sbjct: 61 VVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFY 118
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDYYRYLAEVA GDDKK I+D ++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 119 LKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 178
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGE--- 237
YEI NSPE+A SLAKT FDEA+A+L TLSE+SYKDSTLIMQLLRDNLTLWT+D G+
Sbjct: 179 YEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238
Query: 238 --EGGE 241
EGGE
Sbjct: 239 AGEGGE 244
>gi|208973238 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 340 bits (872), Expect = 7e-94
Identities = 175/246 (71%), Positives = 205/246 (83%), Gaps = 7/246 (2%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
M++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
V+SSIEQK+ EG+E+K REYREK+ETEL+ +C+ VL LL+ LI A AES+VFY
Sbjct: 61 VVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFY 118
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDYYRYLAEVA GDDKK I+D ++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 119 LKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 178
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGE--- 237
YEI NSPE+A SLAKT FDEA+A+L TLSE+SYKDSTLIMQLLRDNLTLWT+D G+
Sbjct: 179 YEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238
Query: 238 --EGGE 241
EGGE
Sbjct: 239 AGEGGE 244
>gi|21735625 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 340 bits (872), Expect = 7e-94
Identities = 175/246 (71%), Positives = 205/246 (83%), Gaps = 7/246 (2%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
M++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
V+SSIEQK+ EG+E+K REYREK+ETEL+ +C+ VL LL+ LI A AES+VFY
Sbjct: 61 VVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFY 118
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDYYRYLAEVA GDDKK I+D ++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 119 LKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 178
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGE--- 237
YEI NSPE+A SLAKT FDEA+A+L TLSE+SYKDSTLIMQLLRDNLTLWT+D G+
Sbjct: 179 YEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238
Query: 238 --EGGE 241
EGGE
Sbjct: 239 AGEGGE 244
>gi|4507953 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, zeta polypeptide [Homo sapiens]
Length = 245
Score = 340 bits (872), Expect = 7e-94
Identities = 175/246 (71%), Positives = 205/246 (83%), Gaps = 7/246 (2%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
M++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 1 MDKNELVQKAKLAEQAERYDDMAACMKSVTEQGAELSNEERNLLSVAYKNVVGARRSSWR 60
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
V+SSIEQK+ EG+E+K REYREK+ETEL+ +C+ VL LL+ LI A AES+VFY
Sbjct: 61 VVSSIEQKT--EGAEKKQQMAREYREKIETELRDICNDVLSLLEKFLIPNASQAESKVFY 118
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDYYRYLAEVA GDDKK I+D ++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 119 LKMKGDYYRYLAEVAAGDDKKGIVDQSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 178
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGE--- 237
YEI NSPE+A SLAKT FDEA+A+L TLSE+SYKDSTLIMQLLRDNLTLWT+D G+
Sbjct: 179 YEILNSPEKACSLAKTAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDTQGDEAE 238
Query: 238 --EGGE 241
EGGE
Sbjct: 239 AGEGGE 244
>gi|5803227 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, theta polypeptide [Homo sapiens]
Length = 245
Score = 337 bits (863), Expect = 7e-93
Identities = 171/238 (71%), Positives = 205/238 (86%), Gaps = 2/238 (0%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
ME+ LIQKAKLAEQAERY+DMA MK E+G ELS EERNLLSVAYKNVVGG+R+AWR
Sbjct: 1 MEKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNVVGGRRSAWR 60
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
V+SSIEQK++ S++K +++YREKVE+EL+ +C TVL LLD +LI A + ES+VFY
Sbjct: 61 VISSIEQKTDT--SDKKLQLIKDYREKVESELRSICTTVLELLDKYLIANATNPESKVFY 118
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDY+RYLAEVA GDD+K+ ID+++ AYQEA DISKKEM PT+PIRLGLALNFSVF+
Sbjct: 119 LKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQEAFDISKKEMQPTHPIRLGLALNFSVFY 178
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEE 238
YEI N+PE A +LAKT FDEA+A+L TL+EDSYKDSTLIMQLLRDNLTLWT+D+AGEE
Sbjct: 179 YEILNNPELACTLAKTAFDEAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDSAGEE 236
>gi|4507949 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, beta polypeptide [Homo sapiens]
Length = 246
Score = 328 bits (840), Expect = 3e-90
Identities = 164/239 (68%), Positives = 203/239 (84%), Gaps = 2/239 (0%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
M+++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
V+SSIEQK+ E +E+K +EYREK+E ELQ +C+ VL LLD +LI A ES+VFY
Sbjct: 63 VISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDY+RYL+EVA+GD+K+ + +++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEG 239
YEI NSPE+A SLAKT FDEA+A+L TL+E+SYKDSTLIMQLLRDNLTLWT++N G+EG
Sbjct: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEG 239
>gi|21328448 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, beta polypeptide [Homo sapiens]
Length = 246
Score = 328 bits (840), Expect = 3e-90
Identities = 164/239 (68%), Positives = 203/239 (84%), Gaps = 2/239 (0%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
M+++ L+QKAKLAEQAERY+DMAA MK E+G ELS EERNLLSVAYKNVVG +R++WR
Sbjct: 3 MDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSWR 62
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
V+SSIEQK+ E +E+K +EYREK+E ELQ +C+ VL LLD +LI A ES+VFY
Sbjct: 63 VISSIEQKT--ERNEKKQQMGKEYREKIEAELQDICNDVLELLDKYLIPNATQPESKVFY 120
Query: 121 LKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFH 180
LKMKGDY+RYL+EVA+GD+K+ + +++ AYQEA +ISKKEM PT+PIRLGLALNFSVF+
Sbjct: 121 LKMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFY 180
Query: 181 YEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEG 239
YEI NSPE+A SLAKT FDEA+A+L TL+E+SYKDSTLIMQLLRDNLTLWT++N G+EG
Sbjct: 181 YEILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEG 239
>gi|21464101 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, gamma polypeptide [Homo sapiens]
Length = 247
Score = 320 bits (820), Expect = 7e-88
Identities = 159/243 (65%), Positives = 199/243 (81%), Gaps = 2/243 (0%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
++R L+QKA+LAEQAERY+DMAA MK E E LS EERNLLSVAYKNVVG +R++WR
Sbjct: 2 VDREQLVQKARLAEQAERYDDMAAAMKNVTELNEPLSNEERNLLSVAYKNVVGARRSSWR 61
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA--ESRV 118
V+SSIEQK++ +G+E+K VR YREK+E EL+ VC VL LLD++LIK + ES+V
Sbjct: 62 VISSIEQKTSADGNEKKIEMVRAYREKIEKELEAVCQDVLSLLDNYLIKNCSETQYESKV 121
Query: 119 FYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSV 178
FYLKMKGDYYRYLAEVATG+ + +++S+ AY EA +ISK+ M PT+PIRLGLALN+SV
Sbjct: 122 FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSV 181
Query: 179 FHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEE 238
F+YEI N+PE+A LAKT FD+A+A+L TL+EDSYKDSTLIMQLLRDNLTLWT+D ++
Sbjct: 182 FYYEIQNAPEQACHLAKTAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDDD 241
Query: 239 GGE 241
GGE
Sbjct: 242 GGE 244
>gi|4507951 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase
activation protein, eta polypeptide [Homo sapiens]
Length = 246
Score = 313 bits (802), Expect = 9e-86
Identities = 156/242 (64%), Positives = 198/242 (81%), Gaps = 2/242 (0%)
Query: 2 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRV 61
+R L+Q+A+LAEQAERY+DMA+ MK E E LS E+RNLLSVAYKNVVG +R++WRV
Sbjct: 3 DREQLLQRARLAEQAERYDDMASAMKAVTELNEPLSNEDRNLLSVAYKNVVGARRSSWRV 62
Query: 62 LSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDA--ESRVF 119
+SSIEQK+ +G+E+K +V+ YREK+E EL+ VC+ VL LLD LIK D ES+VF
Sbjct: 63 ISSIEQKTMADGNEKKLEKVKAYREKIEKELETVCNDVLSLLDKFLIKNCNDFQYESKVF 122
Query: 120 YLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVF 179
YLKMKGDYYRYLAEVA+G+ K +++++ +AY+EA +ISK++M PT+PIRLGLALNFSVF
Sbjct: 123 YLKMKGDYYRYLAEVASGEKKNSVVEASEAAYKEAFEISKEQMQPTHPIRLGLALNFSVF 182
Query: 180 HYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEG 239
+YEI N+PE+A LAK FD+A+A+L TL+EDSYKDSTLIMQLLRDNLTLWT+D EE
Sbjct: 183 YYEIQNAPEQACLLAKQAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDEEA 242
Query: 240 GE 241
GE
Sbjct: 243 GE 244
>gi|5803225 tyrosine 3/tryptophan 5 -monooxygenase activation
protein, epsilon polypeptide [Homo sapiens]
Length = 255
Score = 294 bits (753), Expect = 4e-80
Identities = 149/247 (60%), Positives = 188/247 (76%), Gaps = 3/247 (1%)
Query: 2 ERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRV 61
+R L+ +AKLAEQAERY++M MK EL+ EERNLLSVAYKNV+G +RA+WR+
Sbjct: 3 DREDLVYQAKLAEQAERYDEMVESMKKVAGMDVELTVEERNLLSVAYKNVIGARRASWRI 62
Query: 62 LSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYL 121
+SSIEQK +G E+K +REYR+ VETEL+ +C +L +LD HLI A ES+VFY
Sbjct: 63 ISSIEQKEENKGGEDKLKMIREYRQMVETELKLICCDILDVLDKHLIPAANTGESKVFYY 122
Query: 122 KMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHY 181
KMKGDY+RYLAE ATG+D+K +++ AY+ A DI+ E+PPT+PIRLGLALNFSVF+Y
Sbjct: 123 KMKGDYHRYLAEFATGNDRKEAAENSLVAYKAASDIAMTELPPTHPIRLGLALNFSVFYY 182
Query: 182 EIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAG---EE 238
EI NSP+ A LAK FD+A+A+L TLSE+SYKDSTLIMQLLRDNLTLWT+D G E+
Sbjct: 183 EILNSPDRACRLAKAAFDDAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDMQGDGEEQ 242
Query: 239 GGEAPQE 245
EA Q+
Sbjct: 243 NKEALQD 249
>gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens]
Length = 2419
Score = 36.2 bits (82), Expect = 0.027
Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 6/72 (8%)
Query: 59 WRVLSSIEQKSNEEGSEEKGPEVR------EYREKVETELQGVCDTVLGLLDSHLIKEAG 112
W+ LS I ++ +E +E+ +V+ E+ + T LQ + +T LD L+KE G
Sbjct: 2131 WKHLSDIIEEREQELQKEEARQVKNFEMCQEFEQNASTFLQWILETRAYFLDGSLLKETG 2190
Query: 113 DAESRVFYLKMK 124
ES++ K K
Sbjct: 2191 TLESQLEANKRK 2202
Score = 29.3 bits (64), Expect = 3.3
Identities = 39/162 (24%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 8 QKAKLAEQAERYEDMAAFMKGAVEKGE----ELSCEE---RNLLSVAYKNVVGGQRAAWR 60
+K KLA+ E Y+D+ +K V+K + EL+ + N+ + + GG A+
Sbjct: 600 KKKKLADD-EDYKDIQN-LKSRVQKQQVFEKELAVNKTQLENIQKTGQEMIEGGHYASDN 657
Query: 61 VLSSIEQKSNE-----EGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAE 115
V + + + ++ E +++KG ++ E ++++ E L + D E
Sbjct: 658 VTTRLSEVASLWEELLEATKQKGTQLHEANQQLQFENNA----------EDLQRWLEDVE 707
Query: 116 SRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDI 157
+V DY + LAEV K +++SA +A Q+ +DI
Sbjct: 708 WQV----TSEDYGKGLAEVQNRLRKHGLLESAVAARQDQVDI 745
>gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens]
Length = 507
Score = 35.4 bits (80), Expect = 0.046
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
MER L ++ ++ E+AER D EL ER LL + + + +
Sbjct: 251 MERQRLAREKQMREEAERTRD-------------EL---ERRLLQMKEEATMANEALMRS 294
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
++ + +EE+ + + + E E+Q + T + + + E E+ V
Sbjct: 295 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLA 354
Query: 121 LKMKGDYYRYLAEV-ATGDDKKRIIDSARSAYQEAMDI-SKKEMPPTNPIRLGLALNFSV 178
LKM + R E D + ++ R A Q+ ++I +K PP NPI L +
Sbjct: 355 LKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPTYPPMNPIPAPLPPDIPS 414
Query: 179 FHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQ 221
F+ I +S +FD D+ LS + K+ M+
Sbjct: 415 FNL-IGDS---------LSFDFKDTDMKRLSMEIEKEKVEYME 447
>gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 35.4 bits (80), Expect = 0.046
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
MER L ++ ++ E+AER D EL ER LL + + + +
Sbjct: 334 MERQRLAREKQMREEAERTRD-------------EL---ERRLLQMKEEATMANEALMRS 377
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
++ + +EE+ + + + E E+Q + T + + + E E+ V
Sbjct: 378 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLA 437
Query: 121 LKMKGDYYRYLAEV-ATGDDKKRIIDSARSAYQEAMDI-SKKEMPPTNPIRLGLALNFSV 178
LKM + R E D + ++ R A Q+ ++I +K PP NPI L +
Sbjct: 438 LKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPTYPPMNPIPAPLPPDIPS 497
Query: 179 FHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQ 221
F+ I +S +FD D+ LS + K+ M+
Sbjct: 498 FNL-IGDS---------LSFDFKDTDMKRLSMEIEKEKVEYME 530
>gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 35.4 bits (80), Expect = 0.046
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
MER L ++ ++ E+AER D EL ER LL + + + +
Sbjct: 334 MERQRLAREKQMREEAERTRD-------------EL---ERRLLQMKEEATMANEALMRS 377
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
++ + +EE+ + + + E E+Q + T + + + E E+ V
Sbjct: 378 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLA 437
Query: 121 LKMKGDYYRYLAEV-ATGDDKKRIIDSARSAYQEAMDI-SKKEMPPTNPIRLGLALNFSV 178
LKM + R E D + ++ R A Q+ ++I +K PP NPI L +
Sbjct: 438 LKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPTYPPMNPIPAPLPPDIPS 497
Query: 179 FHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQ 221
F+ I +S +FD D+ LS + K+ M+
Sbjct: 498 FNL-IGDS---------LSFDFKDTDMKRLSMEIEKEKVEYME 530
>gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens]
Length = 507
Score = 35.4 bits (80), Expect = 0.046
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
MER L ++ ++ E+AER D EL ER LL + + + +
Sbjct: 251 MERQRLAREKQMREEAERTRD-------------EL---ERRLLQMKEEATMANEALMRS 294
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
++ + +EE+ + + + E E+Q + T + + + E E+ V
Sbjct: 295 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLA 354
Query: 121 LKMKGDYYRYLAEV-ATGDDKKRIIDSARSAYQEAMDI-SKKEMPPTNPIRLGLALNFSV 178
LKM + R E D + ++ R A Q+ ++I +K PP NPI L +
Sbjct: 355 LKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPTYPPMNPIPAPLPPDIPS 414
Query: 179 FHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQ 221
F+ I +S +FD D+ LS + K+ M+
Sbjct: 415 FNL-IGDS---------LSFDFKDTDMKRLSMEIEKEKVEYME 447
>gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens]
Length = 549
Score = 35.4 bits (80), Expect = 0.046
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
MER L ++ ++ E+AER D EL ER LL + + + +
Sbjct: 293 MERQRLAREKQMREEAERTRD-------------EL---ERRLLQMKEEATMANEALMRS 336
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
++ + +EE+ + + + E E+Q + T + + + E E+ V
Sbjct: 337 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLA 396
Query: 121 LKMKGDYYRYLAEV-ATGDDKKRIIDSARSAYQEAMDI-SKKEMPPTNPIRLGLALNFSV 178
LKM + R E D + ++ R A Q+ ++I +K PP NPI L +
Sbjct: 397 LKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPTYPPMNPIPAPLPPDIPS 456
Query: 179 FHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQ 221
F+ I +S +FD D+ LS + K+ M+
Sbjct: 457 FNL-IGDS---------LSFDFKDTDMKRLSMEIEKEKVEYME 489
>gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens]
Length = 548
Score = 35.4 bits (80), Expect = 0.046
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
MER L ++ ++ E+AER D EL ER LL + + + +
Sbjct: 292 MERQRLAREKQMREEAERTRD-------------EL---ERRLLQMKEEATMANEALMRS 335
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
++ + +EE+ + + + E E+Q + T + + + E E+ V
Sbjct: 336 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLA 395
Query: 121 LKMKGDYYRYLAEV-ATGDDKKRIIDSARSAYQEAMDI-SKKEMPPTNPIRLGLALNFSV 178
LKM + R E D + ++ R A Q+ ++I +K PP NPI L +
Sbjct: 396 LKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPTYPPMNPIPAPLPPDIPS 455
Query: 179 FHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQ 221
F+ I +S +FD D+ LS + K+ M+
Sbjct: 456 FNL-IGDS---------LSFDFKDTDMKRLSMEIEKEKVEYME 488
>gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens]
Length = 590
Score = 35.4 bits (80), Expect = 0.046
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
MER L ++ ++ E+AER D EL ER LL + + + +
Sbjct: 334 MERQRLAREKQMREEAERTRD-------------EL---ERRLLQMKEEATMANEALMRS 377
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
++ + +EE+ + + + E E+Q + T + + + E E+ V
Sbjct: 378 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLA 437
Query: 121 LKMKGDYYRYLAEV-ATGDDKKRIIDSARSAYQEAMDI-SKKEMPPTNPIRLGLALNFSV 178
LKM + R E D + ++ R A Q+ ++I +K PP NPI L +
Sbjct: 438 LKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPTYPPMNPIPAPLPPDIPS 497
Query: 179 FHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQ 221
F+ I +S +FD D+ LS + K+ M+
Sbjct: 498 FNL-IGDS---------LSFDFKDTDMKRLSMEIEKEKVEYME 530
>gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens]
Length = 595
Score = 35.4 bits (80), Expect = 0.046
Identities = 51/223 (22%), Positives = 90/223 (40%), Gaps = 28/223 (12%)
Query: 1 MERASLIQKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWR 60
MER L ++ ++ E+AER D EL ER LL + + + +
Sbjct: 334 MERQRLAREKQMREEAERTRD-------------EL---ERRLLQMKEEATMANEALMRS 377
Query: 61 VLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFY 120
++ + +EE+ + + + E E+Q + T + + + E E+ V
Sbjct: 378 EETADLLAEKAQITEEEAKLLAQKAAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLA 437
Query: 121 LKMKGDYYRYLAEV-ATGDDKKRIIDSARSAYQEAMDI-SKKEMPPTNPIRLGLALNFSV 178
LKM + R E D + ++ R A Q+ ++I +K PP NPI L +
Sbjct: 438 LKMAEESERRAKEADQLKQDLQEAREAERRAKQKLLEIATKPTYPPMNPIPAPLPPDIPS 497
Query: 179 FHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQ 221
F+ I +S +FD D+ LS + K+ M+
Sbjct: 498 FNL-IGDS---------LSFDFKDTDMKRLSMEIEKEKVEYME 530
>gi|90186267 ankyrin repeat domain 55 isoform 1 [Homo sapiens]
Length = 614
Score = 33.1 bits (74), Expect = 0.23
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 26/120 (21%)
Query: 59 WRVLSSI--EQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAES 116
+ VL+ I + K E+ + +K P YRE+ +E+ + T ++ ++ ++ GD
Sbjct: 343 FNVLNQIFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGD--- 399
Query: 117 RVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTN-----PIRLG 171
+VA + KK+ D+++ E +++K +PP PI LG
Sbjct: 400 ----------------QVAMVEFKKKTSDNSKYLLPEKKPLARKGLPPIRTQSLPPITLG 443
>gi|90186264 ankyrin repeat domain 55 isoform 2 [Homo sapiens]
Length = 326
Score = 33.1 bits (74), Expect = 0.23
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 26/120 (21%)
Query: 59 WRVLSSI--EQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAES 116
+ VL+ I + K E+ + +K P YRE+ +E+ + T ++ ++ ++ GD
Sbjct: 55 FNVLNQIFCKNKKEEQRAHQKDPSRDRYREEDTSEVNDIITTFDSIVGTNCQEQPGD--- 111
Query: 117 RVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTN-----PIRLG 171
+VA + KK+ D+++ E +++K +PP PI LG
Sbjct: 112 ----------------QVAMVEFKKKTSDNSKYLLPEKKPLARKGLPPIRTQSLPPITLG 155
>gi|145309324 FH2 domain containing 1 [Homo sapiens]
Length = 1143
Score = 32.3 bits (72), Expect = 0.39
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 140 KKRIIDSARSAYQEAMDISKKEMPPTNPIRLG-----LALNFSVFHYEIANSPEEAISLA 194
+++ + R Y E + + + PP +P+ LG L + F+ + + EE L
Sbjct: 638 RRQGVSVLRKRYSEPVSLGSAQSPPLSPLALGIKEHELVTGLAQFNLQGSQGMEETSQLT 697
Query: 195 KTTFD--EAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEAPQEPQS 248
+ F E + H + S+ + + RD L + A E+G AP EP S
Sbjct: 698 LSDFSPMELESVGHRGPQSLSASSSSLTPMGRD--ALGSLSPALEDGKAAPDEPGS 751
>gi|37059814 ETAA16 protein [Homo sapiens]
Length = 926
Score = 32.0 bits (71), Expect = 0.51
Identities = 34/152 (22%), Positives = 62/152 (40%), Gaps = 16/152 (10%)
Query: 104 DSHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMP 163
+S L K+ G + Y + + +A D+K + S M I + +P
Sbjct: 110 NSPLTKQLGKGRKKQIYTTDSDEISHIVNRIAPQDEKP----TTNSMLD--MWIGETAIP 163
Query: 164 PTNPIRLGLA-LNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKD------- 215
T + G + S + + EE + LAK FD+ M +L + E + ++
Sbjct: 164 CTPSVAKGKSRAKISCTKLKTQSQEEELMKLAKQ-FDKNMEELDVIQEQNKRNYDFTQMI 222
Query: 216 -STLIMQLLRDNLTLWTADNAGEEGGEAPQEP 246
T I+ +DN+ +W+ N E A ++P
Sbjct: 223 SETEILSNYKDNIQMWSLHNIVPEIDNATKKP 254
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 31.2 bits (69), Expect = 0.88
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 9/87 (10%)
Query: 8 QKAKLAEQAERYEDMAAFMKGAVEKGEELSCEERNLLSVAYKNVVGGQRAAWRVLSSIEQ 67
+K K A++ ++ ++ + VE E S E +LL K LSS E+
Sbjct: 2198 RKRKEAKRGDKPKEKFSSQVDEVESEEHFSEEMESLLDELEKQ---------ESLSSEEE 2248
Query: 68 KSNEEGSEEKGPEVREYREKVETELQG 94
+ EE E + EVRE E+ + E +G
Sbjct: 2249 EEREEEEEREEEEVREEEEERKEEEEG 2275
>gi|38788333 remodeling and spacing factor 1 [Homo sapiens]
Length = 1441
Score = 30.0 bits (66), Expect = 2.0
Identities = 26/107 (24%), Positives = 49/107 (45%), Gaps = 9/107 (8%)
Query: 68 KSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVFYLKMKGDY 127
+++EE EE+G R+ ++ET+ + CD G D++ + A D++ RV + +
Sbjct: 1283 EADEEEEEEEGKPSRKRLHRIETDEEESCDNAHG--DAN--QPARDSQPRVLPSEQESTK 1338
Query: 128 YRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLAL 174
Y E +D + + +D S ++P TN G A+
Sbjct: 1339 KPYRIESDEEEDFENV-----GKVGSPLDYSLVDLPSTNGQSPGKAI 1380
>gi|157502171 sorting nexin 19 [Homo sapiens]
Length = 992
Score = 30.0 bits (66), Expect = 2.0
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 69 SNEEGSEEKGPEVREYREKVETELQGVC-DTVLGLLDSHLIK 109
S EGS PEV E E VE +L G+C + +G SH ++
Sbjct: 317 SEPEGSAGPSPEVEEGHEAVEGDLGGMCEERKVGNNSSHFLQ 358
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 29.3 bits (64), Expect = 3.3
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 14/102 (13%)
Query: 60 RVLSSIEQKSNEEGSEEKGPEVREYREKVETELQGVCDTVLGLLDSHLIKEAGDAESRVF 119
R LS IE++ +E EE+ E E E E LLDS ++ + G +S
Sbjct: 345 RELSRIEEEKEDEEEEEEEEEEEEEEEVTEV-----------LLDSCVVSQVGVGQSEED 393
Query: 120 YLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKE 161
+ + + L E + KK ++ A +EA +++++E
Sbjct: 394 GTRPQSTSDQKLWEEVGEEAKK---EAEEKAKEEAEEVAEEE 432
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.128 0.349
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,966,973
Number of Sequences: 37866
Number of extensions: 369576
Number of successful extensions: 1134
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1082
Number of HSP's gapped (non-prelim): 82
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.