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Search of human proteins with 54112432
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|54112432 erv1-like growth factor [Homo sapiens]
(205 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|54112432 erv1-like growth factor [Homo sapiens] 446 e-126
gi|145580631 quiescin Q6 sulfhydryl oxidase 2 [Homo sapiens] 34 0.099
gi|47717116 MAX interactor 1 isoform b [Homo sapiens] 32 0.29
gi|216548627 hairy and enhancer of split 4 isoform 1 [Homo sapiens] 32 0.49
gi|10863967 hairy and enhancer of split 4 isoform 2 [Homo sapiens] 32 0.49
gi|24308227 zinc finger protein 687 [Homo sapiens] 31 0.64
gi|7019591 zinc finger protein 224 [Homo sapiens] 31 0.64
gi|13129124 caspase recruitment domain protein 14 isoform 1 [Hom... 31 0.84
gi|16507955 caspase recruitment domain protein 14 isoform 2 [Hom... 31 0.84
gi|71037407 zinc finger protein 329 [Homo sapiens] 30 1.1
gi|48717241 zinc finger protein 425 [Homo sapiens] 30 1.1
gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens] 30 1.4
gi|37537684 zinc finger protein 92 isoform 1 [Homo sapiens] 29 2.4
gi|23097323 zinc finger protein 92 isoform 2 [Homo sapiens] 29 2.4
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 29 3.2
gi|150170670 piccolo isoform 2 [Homo sapiens] 29 3.2
gi|150378539 piccolo isoform 1 [Homo sapiens] 29 3.2
gi|55741659 zinc finger protein 14-like [Homo sapiens] 29 3.2
gi|149944526 additional sex combs like 3 [Homo sapiens] 29 3.2
gi|239753883 PREDICTED: hypothetical protein [Homo sapiens] 28 4.2
gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo ... 28 4.2
gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo ... 28 4.2
gi|109240536 DC-STAMP domain containing 2 [Homo sapiens] 28 4.2
gi|31377579 zinc finger protein 785 [Homo sapiens] 28 4.2
gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo sapi... 28 4.2
gi|163965434 dapper, antagonist of beta-catenin, homolog 2 [Homo... 28 4.2
gi|30794504 zinc finger protein 354C [Homo sapiens] 28 4.2
gi|221307571 zinc finger protein 234 [Homo sapiens] 28 5.5
gi|24307913 zinc finger protein 234 [Homo sapiens] 28 5.5
gi|33188459 B-Raf [Homo sapiens] 28 5.5
>gi|54112432 erv1-like growth factor [Homo sapiens]
Length = 205
Score = 446 bits (1147), Expect = e-126
Identities = 205/205 (100%), Positives = 205/205 (100%)
Query: 1 MAAPGERGRFHGGNLFFLPGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSP 60
MAAPGERGRFHGGNLFFLPGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSP
Sbjct: 1 MAAPGERGRFHGGNLFFLPGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSP 60
Query: 61 VAEDASRRRPCRACVDFKTWMRTQQKRDTKFREDCPPDREELGRHSWAVLHTLAAYYPDL 120
VAEDASRRRPCRACVDFKTWMRTQQKRDTKFREDCPPDREELGRHSWAVLHTLAAYYPDL
Sbjct: 61 VAEDASRRRPCRACVDFKTWMRTQQKRDTKFREDCPPDREELGRHSWAVLHTLAAYYPDL 120
Query: 121 PTPEQQQDMAQFIHLFSKFYPCEECAEDLRKRLCRNHPDTRTRACFTQWLCHLHNEVNRK 180
PTPEQQQDMAQFIHLFSKFYPCEECAEDLRKRLCRNHPDTRTRACFTQWLCHLHNEVNRK
Sbjct: 121 PTPEQQQDMAQFIHLFSKFYPCEECAEDLRKRLCRNHPDTRTRACFTQWLCHLHNEVNRK 180
Query: 181 LGKPDFDCSKVDERWRDGWKDGSCD 205
LGKPDFDCSKVDERWRDGWKDGSCD
Sbjct: 181 LGKPDFDCSKVDERWRDGWKDGSCD 205
>gi|145580631 quiescin Q6 sulfhydryl oxidase 2 [Homo sapiens]
Length = 698
Score = 33.9 bits (76), Expect = 0.099
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 17/101 (16%)
Query: 95 CPPDREELGRHS---WAVLHTL---AAYYPDLPTPEQQQD--------MAQFIHLFSKFY 140
C R EL + W + HTL A+ +PD +D M +++H F +
Sbjct: 418 CQGSRSELRGYPCSLWKLFHTLTVEASTHPDALVGTGFEDDPQAVLQTMRRYVHTF---F 474
Query: 141 PCEECAEDLRKRLCRNHPDTRTRACFTQWLCHLHNEVNRKL 181
C+EC E + + +T WL HN VN +L
Sbjct: 475 GCKECGEHFEEMAKESMDSVKTPDQAILWLWKKHNMVNGRL 515
>gi|47717116 MAX interactor 1 isoform b [Homo sapiens]
Length = 295
Score = 32.3 bits (72), Expect = 0.29
Identities = 26/101 (25%), Positives = 42/101 (41%), Gaps = 7/101 (6%)
Query: 33 DARGRGAGRRDAAASASTPAQAPTSDSPVAEDASRRRP-CRACVDFKTWMRTQQKRDTKF 91
+AR GAG AA A PA A + ED + +P C F T + +K F
Sbjct: 10 EARCEGAGLAPAAPPAVPPAVAAPQPPALPEDPAGAKPRCPFSDIFNTSENSMEKHINTF 69
Query: 92 RE------DCPPDREELGRHSWAVLHTLAAYYPDLPTPEQQ 126
+ + E++ + + H A+ +P +P+P Q
Sbjct: 70 LQNVQILLEAASYLEQIEKENKKCEHGYASSFPSMPSPRLQ 110
>gi|216548627 hairy and enhancer of split 4 isoform 1 [Homo sapiens]
Length = 247
Score = 31.6 bits (70), Expect = 0.49
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 18 LPGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSD 58
+P RS ++ LA R G RR A+ S + PA+AP +
Sbjct: 157 VPADVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEAPAPE 197
>gi|10863967 hairy and enhancer of split 4 isoform 2 [Homo sapiens]
Length = 221
Score = 31.6 bits (70), Expect = 0.49
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 18 LPGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSD 58
+P RS ++ LA R G RR A+ S + PA+AP +
Sbjct: 131 VPADVRSRLLGHLAACLRQLGPSRRPASLSPAAPAEAPAPE 171
>gi|24308227 zinc finger protein 687 [Homo sapiens]
Length = 1237
Score = 31.2 bits (69), Expect = 0.64
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 30 LATDARGRGAGRRDAAASASTPAQAPT---SDSPVAEDASRRRPCRACVDFKTWMRTQQK 86
LA A G+G G ++A + A+AP S P A A+ C C++ K R +
Sbjct: 628 LALPALGKGEGAITSSAITTVAAEAPVLPLSTEPPAAPATSAYTCFRCLECKEQCRDKAG 687
Query: 87 RDTKFREDCPP 97
F++ PP
Sbjct: 688 MAAHFQQLGPP 698
>gi|7019591 zinc finger protein 224 [Homo sapiens]
Length = 707
Score = 31.2 bits (69), Expect = 0.64
Identities = 21/74 (28%), Positives = 29/74 (39%), Gaps = 12/74 (16%)
Query: 128 DMAQFIHLFSKFYPCEECAEDLRKRLC-----RNHPDTRTRAC------FTQWLCHLHNE 176
D Q +H K Y C+EC + + C R H + C FTQ HLH+
Sbjct: 444 DFHQRVHTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPFQCEECGKRFTQ-NSHLHSH 502
Query: 177 VNRKLGKPDFDCSK 190
G+ + C K
Sbjct: 503 QRVHTGEKPYKCEK 516
>gi|13129124 caspase recruitment domain protein 14 isoform 1 [Homo
sapiens]
Length = 1004
Score = 30.8 bits (68), Expect = 0.84
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 42 RDAAASASTPAQAPTSDSPVAEDASRRRPCR---ACVDFKTWMRTQQ-------KRDTKF 91
RD A SA AQ S S V +D+ RR+ + +T +R Q K++ +
Sbjct: 361 RDQAYSARDSAQREISQSLVEKDSLRRQVFELTDQVCELRTQLRQLQAEPPGVLKQEART 420
Query: 92 REDCPPDREELGR 104
RE CP +++ L R
Sbjct: 421 REPCPREKQRLVR 433
>gi|16507955 caspase recruitment domain protein 14 isoform 2 [Homo
sapiens]
Length = 434
Score = 30.8 bits (68), Expect = 0.84
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 42 RDAAASASTPAQAPTSDSPVAEDASRRRPCR---ACVDFKTWMRTQQ-------KRDTKF 91
RD A SA AQ S S V +D+ RR+ + +T +R Q K++ +
Sbjct: 124 RDQAYSARDSAQREISQSLVEKDSLRRQVFELTDQVCELRTQLRQLQAEPPGVLKQEART 183
Query: 92 REDCPPDREELGR 104
RE CP +++ L R
Sbjct: 184 REPCPREKQRLVR 196
>gi|71037407 zinc finger protein 329 [Homo sapiens]
Length = 541
Score = 30.4 bits (67), Expect = 1.1
Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 12/79 (15%)
Query: 131 QFIHLFSKFYPCEECAEDLRKRLC-----RNHPDTRTRAC------FTQWLCHLHNEVNR 179
Q IH K Y C EC + + R H + C FT + HL +
Sbjct: 278 QRIHTGEKPYECLECGKTFNRNSSLILHQRTHTGEKPYRCNECGKPFTD-ISHLTVHLRI 336
Query: 180 KLGKPDFDCSKVDERWRDG 198
G+ ++CSK + +RDG
Sbjct: 337 HTGEKPYECSKCGKAFRDG 355
>gi|48717241 zinc finger protein 425 [Homo sapiens]
Length = 752
Score = 30.4 bits (67), Expect = 1.1
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 14/78 (17%)
Query: 131 QFIHLFSKFYPCEECAE------DLRKRLCRNHPDTRTRAC------FTQWLCHLHNEVN 178
Q +H + YPC EC + +L+K LC H R C F Q C L +
Sbjct: 265 QVVHTGQRPYPCPECDKTFRYRANLKKHLCL-HRGERPFCCGECGRAFVQ-QCELTEHLR 322
Query: 179 RKLGKPDFDCSKVDERWR 196
G+ F C + D +R
Sbjct: 323 LHSGEKPFQCPQCDRCFR 340
>gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens]
Length = 2419
Score = 30.0 bits (66), Expect = 1.4
Identities = 27/112 (24%), Positives = 45/112 (40%), Gaps = 9/112 (8%)
Query: 71 CRACVDFKTWMRTQQKRDTK--FREDCPPDREELGRHSWAVLHTLAAYYPDLPT-PEQQQ 127
CR D + W++ + T +D ++ L RH +L +A++ P + E+
Sbjct: 799 CRDTEDEEAWIQETEPSATSTYLGKDLIASKKLLNRHR-VILENIASHEPRIQEITERGN 857
Query: 128 DMAQFIH-----LFSKFYPCEECAEDLRKRLCRNHPDTRTRACFTQWLCHLH 174
M + H + S+ + E LR R R D F Q+L LH
Sbjct: 858 KMVEEGHFAAEDVASRVKSLNQNMESLRARAARRQNDLEANVQFQQYLADLH 909
>gi|37537684 zinc finger protein 92 isoform 1 [Homo sapiens]
Length = 517
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 15/77 (19%)
Query: 71 CRACVDFKTWMRTQQKRDTKFREDCPPDREELGRHSWAVLHTLAAYYPDLPTPEQQQDMA 130
C C +W K ED P EE G+ +++V TL +
Sbjct: 358 CEKCGKAFSWSSAFTKHKRNHMEDKPYKCEECGK-AFSVFSTLTKH-------------- 402
Query: 131 QFIHLFSKFYPCEECAE 147
+ IH K Y CEEC +
Sbjct: 403 KIIHTREKPYKCEECGK 419
>gi|23097323 zinc finger protein 92 isoform 2 [Homo sapiens]
Length = 586
Score = 29.3 bits (64), Expect = 2.4
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 15/77 (19%)
Query: 71 CRACVDFKTWMRTQQKRDTKFREDCPPDREELGRHSWAVLHTLAAYYPDLPTPEQQQDMA 130
C C +W K ED P EE G+ +++V TL +
Sbjct: 427 CEKCGKAFSWSSAFTKHKRNHMEDKPYKCEECGK-AFSVFSTLTKH-------------- 471
Query: 131 QFIHLFSKFYPCEECAE 147
+ IH K Y CEEC +
Sbjct: 472 KIIHTREKPYKCEECGK 488
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 28.9 bits (63), Expect = 3.2
Identities = 20/63 (31%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 6 ERGRFHGGNLFFLPGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTS-DSPVAED 64
++G+ GG+ F+LP + A AR G G S+ PA+ +S D P E
Sbjct: 155 QKGQGPGGDGFYLPTAGAPGSLHSHAPSARTPGGGH-----SSGAPAKGSSSRDGPAKER 209
Query: 65 ASR 67
A R
Sbjct: 210 AGR 212
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 28.9 bits (63), Expect = 3.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 25 EMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSPVAEDA 65
E + D D R RG G AS+ TP +PTS S + ED+
Sbjct: 1702 ESLTDSPED-RSRGEGSSSLHASSFTPGTSPTSVSSLDEDS 1741
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 28.9 bits (63), Expect = 3.2
Identities = 17/41 (41%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Query: 25 EMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSPVAEDA 65
E + D D R RG G AS+ TP +PTS S + ED+
Sbjct: 1702 ESLTDSPED-RSRGEGSSSLHASSFTPGTSPTSVSSLDEDS 1741
>gi|55741659 zinc finger protein 14-like [Homo sapiens]
Length = 533
Score = 28.9 bits (63), Expect = 3.2
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 10/82 (12%)
Query: 125 QQQDMAQFIHLFSKFYPCEECAED--LRKRLCRN---HPDTRTRACFTQW-----LCHLH 174
QQ + Q IH K Y C+EC + LR++L R+ H + C W L
Sbjct: 353 QQLTVHQSIHTGEKPYECKECGKTFRLRQQLVRHQRIHTREKPYECMECWKTFSSYSQLI 412
Query: 175 NEVNRKLGKPDFDCSKVDERWR 196
+ + +G+ ++C + + +R
Sbjct: 413 SHQSIHIGERPYECEECGKAFR 434
>gi|149944526 additional sex combs like 3 [Homo sapiens]
Length = 2248
Score = 28.9 bits (63), Expect = 3.2
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 30 LATDARGRGAGRRDAAASASTPAQAPTSDSPVAEDASRRRPCRACVDFKT 79
L+ ++ + +G R+ A ++ P Q P +P A +R PC+ VD T
Sbjct: 1432 LSAESLDKNSGPRNRADNSGKPQQPPGGFAPAA--INRSIPCKVIVDHST 1479
>gi|239753883 PREDICTED: hypothetical protein [Homo sapiens]
Length = 296
Score = 28.5 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 19 PGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSP-VAEDASRRRPCRA 73
PGG + D+ + AR RGA R A P+ +P V R R C++
Sbjct: 201 PGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRLRGCKS 256
>gi|239748442 PREDICTED: hypothetical protein XP_002346660 [Homo
sapiens]
Length = 296
Score = 28.5 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 19 PGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSP-VAEDASRRRPCRA 73
PGG + D+ + AR RGA R A P+ +P V R R C++
Sbjct: 201 PGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRLRGCKS 256
>gi|239742378 PREDICTED: hypothetical protein XP_002342507 [Homo
sapiens]
Length = 296
Score = 28.5 bits (62), Expect = 4.2
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Query: 19 PGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSP-VAEDASRRRPCRA 73
PGG + D+ + AR RGA R A P+ +P V R R C++
Sbjct: 201 PGGLAAAAKDETSCAARERGASPRGDAGRVGRTRAVPSCGAPAVGTGPGRLRGCKS 256
>gi|109240536 DC-STAMP domain containing 2 [Homo sapiens]
Length = 773
Score = 28.5 bits (62), Expect = 4.2
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 168 QWLCHLHNEVNRKLGKPDFDCSKVDERWRD 197
QWL H+ + N +LG P C++V + +D
Sbjct: 189 QWLLHIGDVCNSELGNPYLKCARVFDDAKD 218
>gi|31377579 zinc finger protein 785 [Homo sapiens]
Length = 405
Score = 28.5 bits (62), Expect = 4.2
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 131 QFIHLFSKFYPCEECAEDLRKR 152
QFIH K YPC +C R+R
Sbjct: 219 QFIHTGEKPYPCPDCGRRFRQR 240
>gi|34147558 lymphoblastic leukemia derived sequence 1 [Homo
sapiens]
Length = 280
Score = 28.5 bits (62), Expect = 4.2
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 3/54 (5%)
Query: 19 PGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSPVAEDASRRRPCR 72
P G R + + D RG+GRR AA+ S P AP +D P RP +
Sbjct: 219 PPGPRKRPVHRVPDDGARRGSGRRAEAAARSQP--APPAD-PDGSPGGAARPIK 269
>gi|163965434 dapper, antagonist of beta-catenin, homolog 2 [Homo
sapiens]
Length = 774
Score = 28.5 bits (62), Expect = 4.2
Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 12 GGNLFFLPGGARSEMMDDLATDARGRGAGRRDAAASASTPAQAPTSDSPVAEDASRRRPC 71
G L F PG +D A+ RGAGR P + P + E+ S +P
Sbjct: 377 GRLLVFAPG------REDEGGPAQSRGAGRGGPQQQGYMPLEGPQQSGSLPEEGS--KPS 428
Query: 72 RACVDFKTWMRTQQKRDTKFREDCPPDREELGR 104
+CV +T + Q +K ++ P ++ GR
Sbjct: 429 NSCVLRETMV--QASPSSKAQQ--TPSAQDYGR 457
>gi|30794504 zinc finger protein 354C [Homo sapiens]
Length = 554
Score = 28.5 bits (62), Expect = 4.2
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 13/59 (22%)
Query: 133 IHLFSKFYPCEEC--AEDLRKRLCRNHPDTRTRACFTQWLCHLHNEVNRKLGKPDFDCS 189
IH K Y C EC A R LCR H T+ +W ++ GKP F CS
Sbjct: 489 IHTGEKLYKCMECGKAYSYRSNLCR-HKKVHTKEKLYKW---------KEYGKP-FICS 536
>gi|221307571 zinc finger protein 234 [Homo sapiens]
Length = 700
Score = 28.1 bits (61), Expect = 5.5
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 131 QFIHLFSKFYPCEECAEDLRKRL-----CRNHPDTRTRAC------FTQWLCHLHNEVNR 179
Q IH K Y CEEC + +R CR H + C F+Q HL
Sbjct: 475 QLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEECGKVFSQ-ASHLLTHQRV 533
Query: 180 KLGKPDFDCSK 190
G+ F C +
Sbjct: 534 HSGEKPFKCEE 544
>gi|24307913 zinc finger protein 234 [Homo sapiens]
Length = 700
Score = 28.1 bits (61), Expect = 5.5
Identities = 21/71 (29%), Positives = 27/71 (38%), Gaps = 12/71 (16%)
Query: 131 QFIHLFSKFYPCEECAEDLRKRL-----CRNHPDTRTRAC------FTQWLCHLHNEVNR 179
Q IH K Y CEEC + +R CR H + C F+Q HL
Sbjct: 475 QLIHTGEKPYKCEECGKGFSRRADLKIHCRIHTGEKPYNCEECGKVFSQ-ASHLLTHQRV 533
Query: 180 KLGKPDFDCSK 190
G+ F C +
Sbjct: 534 HSGEKPFKCEE 544
>gi|33188459 B-Raf [Homo sapiens]
Length = 766
Score = 28.1 bits (61), Expect = 5.5
Identities = 22/83 (26%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 27 MDDLATDARGRGAGRRDAAASASTPAQAPTSDSPV-----AEDASRRRPCRACVDFKTWM 81
+DDL D RG G SA+ PA P S + V + R R + + + M
Sbjct: 379 IDDLIRDQGFRGDGGSTTGLSATPPASLPGSLTNVKALQKSPGPQRERKSSSSSEDRNRM 438
Query: 82 RTQQKRDTKFREDCPPDREELGR 104
+T +RD+ + P + +G+
Sbjct: 439 KTLGRRDSSDDWEIPDGQITVGQ 461
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,975,141
Number of Sequences: 37866
Number of extensions: 494417
Number of successful extensions: 4163
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 4012
Number of HSP's gapped (non-prelim): 205
length of query: 205
length of database: 18,247,518
effective HSP length: 97
effective length of query: 108
effective length of database: 14,574,516
effective search space: 1574047728
effective search space used: 1574047728
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.