Guide to the Human Genome
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Name: CMPK1 Sequence: fasta or formatted (179aa) NCBI GI: 209915597
Description:

UMP-CMP kinase 1 isoform b

Referenced in:

Nucleotide Pathways

Other entries for this name:
alt prot [228aa] UMP-CMP kinase 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.9          7           2
 C cysteine            3.4          6           1
 D aspartate           7.3         13           2
 E glutamate           6.7         12           2
 F phenylalanine       5.0          9           2
 G glycine             7.8         14           2
 H histidine           0.6          1           1
 I isoleucine          5.6         10           2
 K lysine              7.8         14           2
 L leucine            10.6         19           2
 M methionine          3.4          6           1
 N asparagine          4.5          8           2
 P proline             3.4          6           1
 Q glutamine           5.0          9           1
 R arginine            6.7         12           2
 S serine              6.7         12           2
 T threonine           3.4          6           1
 V valine              6.7         12           2
 W tryptophan          0.6          1           1
 Y tyrosine            1.1          2           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UMP-CMP kinase 1 isoform b 
CMPK1                 0.929   UMP-CMP kinase 1 isoform a 
AK1                   0.228   adenylate kinase 1 
AK5                   0.154   adenylate kinase 5 isoform 1 
AK5                   0.154   adenylate kinase 5 isoform 2 
AK2                   0.104   adenylate kinase 2 isoform a 
AK2                   0.104   adenylate kinase 2 isoform b 
AK3L1                 0.030   adenylate kinase 3-like 1 isoform 7 
AK3L1                 0.030   adenylate kinase 3-like 1 isoform 5 
AK3L1                 0.030   adenylate kinase 3-like 1 isoform 6 
AK3                   0.027   adenylate kinase 3 
PIK3R3                0.015   phosphoinositide-3-kinase, regulatory subunit 3 (p5...
PIK3R3                0.015   phosphoinositide-3-kinase, regulatory subunit 3 (p5...
UCK2                  0.015   uridine-cytidine kinase 2 
UCK1                  0.015   uridine-cytidine kinase 1 isoform b 
UCK1                  0.015   uridine-cytidine kinase 1 isoform a 
SH3RF1                0.012   SH3 domain containing ring finger 1 
PIK3R1                0.009   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.009   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
PIK3R1                0.009   phosphoinositide-3-kinase, regulatory subunit 1 (alp...
SLFN5                 0.009   schlafen family member 5 
PIK3R2                0.009   phosphoinositide-3-kinase, regulatory subunit 2 (beta...
VWF                   0.009   von Willebrand factor preproprotein 
SLFN11                0.009   schlafen family member 11 
SLFN11                0.009   schlafen family member 11 
SLFN11                0.009   schlafen family member 11 
SLFN11                0.009   schlafen family member 11 
SLFN11                0.009   schlafen family member 11 
SLFN13                0.009   schlafen family member 13 
ATG16L1               0.006   APG16 autophagy 16-like isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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