Guide to the Human Genome
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Name: OR2W1 Sequence: fasta or formatted (320aa) NCBI GI: 13624329
Description:

olfactory receptor, family 2, subfamily W, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         15           1
 C cysteine            3.4         11           1
 D aspartate           3.1         10           1
 E glutamate           1.2          4           1
 F phenylalanine       4.7         15           2
 G glycine             4.4         14           1
 H histidine           2.8          9           2
 I isoleucine          9.4         30           3
 K lysine              5.9         19           2
 L leucine            15.0         48           3
 M methionine          5.0         16           1
 N asparagine          4.7         15           2
 P proline             3.8         12           1
 Q glutamine           2.2          7           1
 R arginine            2.5          8           1
 S serine              7.8         25           2
 T threonine           7.2         23           3
 V valine              6.6         21           2
 W tryptophan          0.9          3           1
 Y tyrosine            4.7         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 2, subfamily W, member 1 ... 
OR2G3                 0.583   olfactory receptor, family 2, subfamily G, member 3 ...
OR2W3                 0.578   olfactory receptor, family 2, subfamily W, member 3 ...
OR2C3                 0.570   olfactory receptor, family 2, subfamily C, member 3...
OR2G6                 0.566   olfactory receptor, family 2, subfamily G, member 6 ...
OR2G2                 0.537   olfactory receptor, family 2, subfamily G, member 2 ...
OR2J3                 0.536   olfactory receptor, family 2, subfamily J, member 3...
OR2J2                 0.532   olfactory receptor, family 2, subfamily J, member 2...
OR2B3                 0.531   olfactory receptor, family 2, subfamily B, member 3 ...
OR2H2                 0.521   olfactory receptor, family 2, subfamily H, member 2 ...
OR2H1                 0.521   olfactory receptor, family 2, subfamily H, member 1 ...
OR2C1                 0.516   olfactory receptor, family 2, subfamily C, member 1...
OR2B6                 0.515   olfactory receptor, family 2, subfamily B, member 6 ...
OR2Y1                 0.510   olfactory receptor, family 2, subfamily Y, member 1 ...
OR2B2                 0.505   olfactory receptor, family 2, subfamily B, member 2 ...
OR2B11                0.497   olfactory receptor, family 2, subfamily B, member 11...
OR2D3                 0.456   olfactory receptor, family 2, subfamily D, member 3 ...
OR1L4                 0.443   olfactory receptor, family 1, subfamily L, member 4 ...
OR5V1                 0.432   olfactory receptor, family 5, subfamily V, member 1 ...
OR1L6                 0.429   olfactory receptor, family 1, subfamily L, member 6 ...
OR13D1                0.427   olfactory receptor, family 13, subfamily D, member 1...
OR2K2                 0.422   olfactory receptor, family 2, subfamily K, member 2 ...
OR10A7                0.422   olfactory receptor, family 10, subfamily A, member 7...
OR13C4                0.422   olfactory receptor, family 13, subfamily C, member 4...
OR13C2                0.421   olfactory receptor, family 13, subfamily C, member 2...
OR13C9                0.419   olfactory receptor, family 13, subfamily C, member 9...
OR5AR1                0.414   olfactory receptor, family 5, subfamily AR, member 1...
OR2D2                 0.414   olfactory receptor, family 2, subfamily D, member 2 ...
OR13F1                0.413   olfactory receptor, family 13, subfamily F, member 1...
OR13C3                0.409   olfactory receptor, family 13, subfamily C, member 3...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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