Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 52426782

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|52426782 osteoclast inhibitory lectin isoform 2 [Homo
sapiens]
         (194 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|52426782 osteoclast inhibitory lectin isoform 2 [Homo sapiens]     412   e-116
gi|7019447 osteoclast inhibitory lectin isoform 1 [Homo sapiens]      333   5e-92
gi|195222725 C-type lectin domain family 2, member A [Homo sapiens]   112   2e-25
gi|4502681 CD69 molecule [Homo sapiens]                               108   3e-24
gi|37577107 C-type lectin, superfamily member 2 [Homo sapiens]         97   9e-21
gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]                76   2e-14
gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]     74   6e-14
gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]     74   6e-14
gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]     74   6e-14
gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo...    74   6e-14
gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]      74   6e-14
gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]    74   1e-13
gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo...    72   3e-13
gi|13384604 dendritic cell-associated C-type lectin 1 isoform b ...    69   3e-12
gi|20149533 Fc fragment of IgE, low affinity II, receptor for (C...    68   6e-12
gi|167614498 killer cell lectin-like receptor subfamily D, membe...    67   1e-11
gi|4504889 killer cell lectin-like receptor subfamily D, member ...    67   1e-11
gi|7657333 C-type lectin domain family 4, member E [Homo sapiens]      67   1e-11
gi|38348332 killer cell lectin-like receptor subfamily G, member...    65   4e-11
gi|7669499 killer cell lectin-like receptor subfamily D, member ...    65   5e-11
gi|37675379 dendritic cell-associated C-type lectin 1 isoform e ...    64   1e-10
gi|37675373 dendritic cell-associated C-type lectin 1 isoform a ...    64   1e-10
gi|47717096 killer cell lectin-like receptor subfamily G, member...    62   2e-10
gi|169234653 NKG2-D type II integral membrane protein [Homo sapi...    62   4e-10
gi|45580692 C-type lectin domain family 4, member C isoform 2 [H...    61   5e-10
gi|18466806 C-type lectin domain family 4, member C isoform 1 [H...    61   5e-10
gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]     60   2e-09
gi|4505501 oxidized low density lipoprotein (lectin-like) recept...    59   3e-09
gi|75709169 killer cell lectin-like receptor subfamily C, member...    58   4e-09
gi|18641360 collectin sub-family member 12 [Homo sapiens]              58   6e-09

>gi|52426782 osteoclast inhibitory lectin isoform 2 [Homo sapiens]
          Length = 194

 Score =  412 bits (1059), Expect = e-116
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MHDSNNVEKDITPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR 60
           MHDSNNVEKDITPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
Sbjct: 1   MHDSNNVEKDITPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR 60

Query: 61  ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN 120
           ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
Sbjct: 61  ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN 120

Query: 121 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQLVMKEDGANLYVAKVSQVPRMNPRPV 180
           FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQLVMKEDGANLYVAKVSQVPRMNPRPV
Sbjct: 121 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQLVMKEDGANLYVAKVSQVPRMNPRPV 180

Query: 181 MVSYPGSRRVCLFE 194
           MVSYPGSRRVCLFE
Sbjct: 181 MVSYPGSRRVCLFE 194


>gi|7019447 osteoclast inhibitory lectin isoform 1 [Homo sapiens]
          Length = 191

 Score =  333 bits (854), Expect = 5e-92
 Identities = 156/166 (93%), Positives = 158/166 (95%)

Query: 1   MHDSNNVEKDITPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR 60
           MHDSNNVEKDITPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR
Sbjct: 1   MHDSNNVEKDITPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIR 60

Query: 61  ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN 120
           ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN
Sbjct: 61  ANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELN 120

Query: 121 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQLVMKEDGANLYV 166
           FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQ  +   G   Y+
Sbjct: 121 FLLRYKGPSDHWIGLSREQGQPWKWINGTEWTRQFPILGAGECAYL 166


>gi|195222725 C-type lectin domain family 2, member A [Homo sapiens]
          Length = 174

 Score =  112 bits (281), Expect = 2e-25
 Identities = 57/124 (45%), Positives = 79/124 (63%), Gaps = 9/124 (7%)

Query: 28  HSIKATLI--WRLFFLIMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQRK 85
           H I   LI  W++  L+ FL+II+  +   + A  +  H +P      AC   W+G + K
Sbjct: 16  HRIVPKLIQNWKIG-LMCFLSIIITTVCIIMIATWSK-HAKP-----VACSGDWLGVRDK 68

Query: 86  CFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKW 145
           CFYFSDDT+NWT+S+ FC  Q A+LAQ+++ +++ FL RY G   HWIGLSR+QG  WKW
Sbjct: 69  CFYFSDDTRNWTASKIFCSLQKAELAQIDTQEDMEFLKRYAGTDMHWIGLSRKQGDSWKW 128

Query: 146 INGT 149
            NGT
Sbjct: 129 TNGT 132


>gi|4502681 CD69 molecule [Homo sapiens]
          Length = 199

 Score =  108 bits (270), Expect = 3e-24
 Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 6/115 (5%)

Query: 42  IMFLTIIVCGMVAALSAIRANCHQE-----PSVCLQAACPESWIGFQRKCFYFSDDTKNW 96
           ++F+TI++  ++A LS  + NC  +     PS    ++C E W+G+QRKC++ S   ++W
Sbjct: 48  VVFITILIIALIA-LSVGQYNCPGQYTFSMPSDSHVSSCSEDWVGYQRKCYFISTVKRSW 106

Query: 97  TSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWINGTEW 151
           TS+Q  C    A LA ++S +++NFL RY G  +HW+GL +E G PWKW NG E+
Sbjct: 107 TSAQNACSEHGATLAVIDSEKDMNFLKRYAGREEHWVGLKKEPGHPWKWSNGKEF 161


>gi|37577107 C-type lectin, superfamily member 2 [Homo sapiens]
          Length = 149

 Score = 97.1 bits (240), Expect = 9e-21
 Identities = 40/96 (41%), Positives = 61/96 (63%)

Query: 72  QAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDH 131
           Q+ CP  WIGFQ KC+YFS +  +W SS+  C +Q ADL  +++ +E+NFL RYK  SDH
Sbjct: 32  QSLCPYDWIGFQNKCYYFSKEEGDWNSSKYNCSTQHADLTIIDNIEEMNFLRRYKCSSDH 91

Query: 132 WIGLSREQGQPWKWINGTEWTRQLVMKEDGANLYVA 167
           WIGL   + +  +W++G  +T+   M+      Y++
Sbjct: 92  WIGLKMAKNRTGQWVDGATFTKSFGMRGSEGCAYLS 127


>gi|4502251 asialoglycoprotein receptor 1 [Homo sapiens]
          Length = 291

 Score = 75.9 bits (185), Expect = 2e-14
 Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 1/80 (1%)

Query: 72  QAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDH 131
           +  CP +W+  +R C++FS   K W  +  +C  +DA L  V S++E  F+  + GP + 
Sbjct: 151 RTCCPVNWVEHERSCYWFSRSGKAWADADNYCRLEDAHLVVVTSWEEQKFVQHHIGPVNT 210

Query: 132 WIGLSREQGQPWKWINGTEW 151
           W+GL  +Q  PWKW++GT++
Sbjct: 211 WMGL-HDQNGPWKWVDGTDY 229


>gi|18426877 asialoglycoprotein receptor 2 isoform c [Homo sapiens]
          Length = 292

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 14/132 (10%)

Query: 23  LHSKEHSIKATLIWRLFFLIMF---LTIIVCGMVAALSAIRANCHQEPSVCLQAACPESW 79
           L  ++  +KA     LF L  F   L  + C M      + +N  Q      +  CP +W
Sbjct: 113 LEKQQQDLKADHDALLFHLKHFPVDLRFVACQM----ELLHSNGSQ------RTCCPVNW 162

Query: 80  IGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQ 139
           +  Q  C++FS   K W  ++++C  ++A L  + S++E  F++++  P + WIGL+   
Sbjct: 163 VEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSD 222

Query: 140 GQPWKWINGTEW 151
           G  WKW++GT++
Sbjct: 223 GS-WKWVDGTDY 233


>gi|18426875 asialoglycoprotein receptor 2 isoform b [Homo sapiens]
          Length = 287

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 14/132 (10%)

Query: 23  LHSKEHSIKATLIWRLFFLIMF---LTIIVCGMVAALSAIRANCHQEPSVCLQAACPESW 79
           L  ++  +KA     LF L  F   L  + C M      + +N  Q      +  CP +W
Sbjct: 108 LEKQQQDLKADHDALLFHLKHFPVDLRFVACQM----ELLHSNGSQ------RTCCPVNW 157

Query: 80  IGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQ 139
           +  Q  C++FS   K W  ++++C  ++A L  + S++E  F++++  P + WIGL+   
Sbjct: 158 VEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSD 217

Query: 140 GQPWKWINGTEW 151
           G  WKW++GT++
Sbjct: 218 GS-WKWVDGTDY 228


>gi|18426873 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 14/132 (10%)

Query: 23  LHSKEHSIKATLIWRLFFLIMF---LTIIVCGMVAALSAIRANCHQEPSVCLQAACPESW 79
           L  ++  +KA     LF L  F   L  + C M      + +N  Q      +  CP +W
Sbjct: 132 LEKQQQDLKADHDALLFHLKHFPVDLRFVACQM----ELLHSNGSQ------RTCCPVNW 181

Query: 80  IGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQ 139
           +  Q  C++FS   K W  ++++C  ++A L  + S++E  F++++  P + WIGL+   
Sbjct: 182 VEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSD 241

Query: 140 GQPWKWINGTEW 151
           G  WKW++GT++
Sbjct: 242 GS-WKWVDGTDY 252


>gi|53832016 C-type lectin, superfamily member 14 isoform 2 [Homo
           sapiens]
          Length = 292

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 7/140 (5%)

Query: 12  TPSELPANPGCLHSKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQEPSVCL 71
           T + L A       +  ++ + ++ R+  L+  L  + C  VA L     N + E +   
Sbjct: 100 TIASLKAEVEGFKQERQAVHSEMLLRVQQLVQDLKKLTC-QVATL-----NNNGEEASTE 153

Query: 72  QAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDH 131
              CP +W+  Q  C++FS    +W  ++++C  ++A L  + S +E NF+ +Y G +  
Sbjct: 154 GTCCPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYLGSAYT 213

Query: 132 WIGLSREQGQPWKWINGTEW 151
           W+GLS  +G  WKW++GT++
Sbjct: 214 WMGLSDPEG-AWKWVDGTDY 232


>gi|4502253 asialoglycoprotein receptor 2 isoform a [Homo sapiens]
          Length = 311

 Score = 74.3 bits (181), Expect = 6e-14
 Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 14/132 (10%)

Query: 23  LHSKEHSIKATLIWRLFFLIMF---LTIIVCGMVAALSAIRANCHQEPSVCLQAACPESW 79
           L  ++  +KA     LF L  F   L  + C M      + +N  Q      +  CP +W
Sbjct: 132 LEKQQQDLKADHDALLFHLKHFPVDLRFVACQM----ELLHSNGSQ------RTCCPVNW 181

Query: 80  IGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQ 139
           +  Q  C++FS   K W  ++++C  ++A L  + S++E  F++++  P + WIGL+   
Sbjct: 182 VEHQGSCYWFSHSGKAWAEAEKYCQLENAHLVVINSWEEQKFIVQHTNPFNTWIGLTDSD 241

Query: 140 GQPWKWINGTEW 151
           G  WKW++GT++
Sbjct: 242 GS-WKWVDGTDY 252


>gi|168229214 C-type lectin domain family 2, member L [Homo sapiens]
          Length = 214

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 32/108 (29%), Positives = 65/108 (60%), Gaps = 12/108 (11%)

Query: 41  LIMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQ 100
           +++F  ++V  ++A+   I+           +A CPE W+ + RKC++FS++ ++W + +
Sbjct: 76  VLLFAILVVMSILASKGCIKC----------EAPCPEDWLLYGRKCYFFSEEPRDWNTGR 125

Query: 101 RFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWING 148
           ++C + +A LA ++S +EL F+ ++    + WIGL R  G  + W+NG
Sbjct: 126 QYCHTHEAVLAVIQSQKELEFMFKFT-RREPWIGL-RRVGDEFHWVNG 171


>gi|33667103 C-type lectin, superfamily member 14 isoform 1 [Homo
           sapiens]
          Length = 316

 Score = 72.0 bits (175), Expect = 3e-13
 Identities = 27/77 (35%), Positives = 49/77 (63%), Gaps = 1/77 (1%)

Query: 75  CPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIG 134
           CP +W+  Q  C++FS    +W  ++++C  ++A L  + S +E NF+ +Y G +  W+G
Sbjct: 181 CPVNWVEHQDSCYWFSHSGMSWAEAEKYCQLKNAHLVVINSREEQNFVQKYLGSAYTWMG 240

Query: 135 LSREQGQPWKWINGTEW 151
           LS  +G  WKW++GT++
Sbjct: 241 LSDPEG-AWKWVDGTDY 256


>gi|13384604 dendritic cell-associated C-type lectin 1 isoform b
           [Homo sapiens]
          Length = 201

 Score = 68.6 bits (166), Expect = 3e-12
 Identities = 38/135 (28%), Positives = 71/135 (52%), Gaps = 12/135 (8%)

Query: 25  SKEHSIKATLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQR 84
           S++ S  A+  WRL  +I+ +  +V  ++A +              L + CP +WI +++
Sbjct: 32  SEKGSCAASPPWRLIAVILGILCLVILVIAVVLGTMG--------VLSSPCPPNWIIYEK 83

Query: 85  KCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRY---KGPSDHWIGLSREQGQ 141
            C+ FS    +W  S+R C    ++L +++S  EL F+++    +  +  WIGLSR Q +
Sbjct: 84  SCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQPDNSFWIGLSRPQTE 143

Query: 142 -PWKWINGTEWTRQL 155
            PW W +G+ ++  L
Sbjct: 144 VPWLWEDGSTFSSNL 158


>gi|20149533 Fc fragment of IgE, low affinity II, receptor for
           (CD23A) [Homo sapiens]
          Length = 321

 Score = 67.8 bits (164), Expect = 6e-12
 Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 1/76 (1%)

Query: 75  CPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIG 134
           CPE WI FQRKC+YF   TK W  ++  CD  +  L  + S +E +FL ++   +  WIG
Sbjct: 163 CPEKWINFQRKCYYFGKGTKQWVHARYACDDMEGQLVSIHSPEEQDFLTKHASHTGSWIG 222

Query: 135 L-SREQGQPWKWINGT 149
           L + +    + W++G+
Sbjct: 223 LRNLDLKGEFIWVDGS 238


>gi|167614498 killer cell lectin-like receptor subfamily D, member 1
           isoform 1 [Homo sapiens]
          Length = 179

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 20/139 (14%)

Query: 33  TLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQE----------PSVCLQ-----AACPE 77
           T +WRL  +   L II   ++A L  +  N   +          P++ LQ      +C E
Sbjct: 6   TTLWRL--ISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCSCQE 63

Query: 78  SWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLS- 136
            W+G++  C++ S + K W  S+  C SQ + L Q+++  EL+F+        +WIGLS 
Sbjct: 64  KWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFM--SSSQQFYWIGLSY 121

Query: 137 REQGQPWKWINGTEWTRQL 155
            E+   W W NG+  ++ L
Sbjct: 122 SEEHTAWLWENGSALSQYL 140


>gi|4504889 killer cell lectin-like receptor subfamily D, member 1
           isoform 1 [Homo sapiens]
          Length = 179

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 41/139 (29%), Positives = 68/139 (48%), Gaps = 20/139 (14%)

Query: 33  TLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQE----------PSVCLQ-----AACPE 77
           T +WRL  +   L II   ++A L  +  N   +          P++ LQ      +C E
Sbjct: 6   TTLWRL--ISGTLGIICLSLMATLGILLKNSFTKLSIEPAFTPGPNIELQKDSDCCSCQE 63

Query: 78  SWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLS- 136
            W+G++  C++ S + K W  S+  C SQ + L Q+++  EL+F+        +WIGLS 
Sbjct: 64  KWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFM--SSSQQFYWIGLSY 121

Query: 137 REQGQPWKWINGTEWTRQL 155
            E+   W W NG+  ++ L
Sbjct: 122 SEEHTAWLWENGSALSQYL 140


>gi|7657333 C-type lectin domain family 4, member E [Homo sapiens]
          Length = 219

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 42/125 (33%), Positives = 65/125 (52%), Gaps = 10/125 (8%)

Query: 62  NCHQEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNF 121
           +C+   S  ++  CP +W  FQ  C++FS DT +W  S + C +  A L  + S +E  F
Sbjct: 67  SCYNYGSGSVKNCCPLNWEYFQSSCYFFSTDTISWALSLKNCSAMGAHLVVINSQEEQEF 126

Query: 122 LLRYKGPS--DHWIGLSRE--QGQPWKWINGTEWTRQLVMKEDGANLYVAKVSQVPRM-- 175
            L YK P   + +IGLS +  +GQ W+W++GT  T+ L   + G    +A +     M  
Sbjct: 127 -LSYKKPKMREFFIGLSDQVVEGQ-WQWVDGTPLTKSLSFWDVGEPNNIATLEDCATMRD 184

Query: 176 --NPR 178
             NPR
Sbjct: 185 SSNPR 189


>gi|38348332 killer cell lectin-like receptor subfamily G, member 2
           [Homo sapiens]
          Length = 409

 Score = 65.1 bits (157), Expect = 4e-11
 Identities = 40/132 (30%), Positives = 59/132 (44%), Gaps = 12/132 (9%)

Query: 33  TLIWRLFFLIMFLTIIVCGMVAALSAIRANCHQEPSVCLQAACPESWIGFQRKCFYFSDD 92
           +L W L F+ + L +    +V   S   A C Q         CP  W+  +  C+YFS +
Sbjct: 260 SLYWALAFMAVLLAVSGVVIVVLASRAGARCQQ---------CPPGWVLSEEHCYYFSAE 310

Query: 93  TKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWINGTEWT 152
            + W +SQ FC +  A L  +   Q+  FL RY      W+G  R   Q W WI+     
Sbjct: 311 AQAWEASQAFCSAYHATLPLLSHTQD--FLGRYPVSRHSWVGAWRGP-QGWHWIDEAPLP 367

Query: 153 RQLVMKEDGANL 164
            QL+ ++   NL
Sbjct: 368 PQLLPEDGEDNL 379


>gi|7669499 killer cell lectin-like receptor subfamily D, member 1
           isoform 2 [Homo sapiens]
          Length = 148

 Score = 64.7 bits (156), Expect = 5e-11
 Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 5/92 (5%)

Query: 65  QEPSVCLQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLR 124
           Q+ S C   +C E W+G++  C++ S + K W  S+  C SQ + L Q+++  EL+F+  
Sbjct: 22  QKDSDC--CSCQEKWVGYRCNCYFISSEQKTWNESRHLCASQKSSLLQLQNTDELDFM-- 77

Query: 125 YKGPSDHWIGLS-REQGQPWKWINGTEWTRQL 155
                 +WIGLS  E+   W W NG+  ++ L
Sbjct: 78  SSSQQFYWIGLSYSEEHTAWLWENGSALSQYL 109


>gi|37675379 dendritic cell-associated C-type lectin 1 isoform e
           [Homo sapiens]
          Length = 168

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 71  LQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRY---KG 127
           L + CP +WI +++ C+ FS    +W  S+R C    ++L +++S  EL F+++    + 
Sbjct: 37  LSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQP 96

Query: 128 PSDHWIGLSREQGQ-PWKWINGTEWTRQL 155
            +  WIGLSR Q + PW W +G+ ++  L
Sbjct: 97  DNSFWIGLSRPQTEVPWLWEDGSTFSSNL 125


>gi|37675373 dendritic cell-associated C-type lectin 1 isoform a
           [Homo sapiens]
          Length = 247

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 29/89 (32%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 71  LQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRY---KG 127
           L + CP +WI +++ C+ FS    +W  S+R C    ++L +++S  EL F+++    + 
Sbjct: 116 LSSPCPPNWIIYEKSCYLFSMSLNSWDGSKRQCWQLGSNLLKIDSSNELGFIVKQVSSQP 175

Query: 128 PSDHWIGLSREQGQ-PWKWINGTEWTRQL 155
            +  WIGLSR Q + PW W +G+ ++  L
Sbjct: 176 DNSFWIGLSRPQTEVPWLWEDGSTFSSNL 204


>gi|47717096 killer cell lectin-like receptor subfamily G, member 1
           [Homo sapiens]
          Length = 189

 Score = 62.4 bits (150), Expect = 2e-10
 Identities = 26/76 (34%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 74  ACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWI 133
           +CP+ W+ +   C+YFS + K+W SS  FC ++D+ L  +   QE++ L  +   +  WI
Sbjct: 74  SCPDRWMKYGNHCYYFSVEEKDWNSSLEFCLARDSHLLVITDNQEMSLLQVFLSEAFCWI 133

Query: 134 GLSREQGQPWKWINGT 149
           GL    G  W+W +G+
Sbjct: 134 GLRNNSG--WRWEDGS 147


>gi|169234653 NKG2-D type II integral membrane protein [Homo
           sapiens]
          Length = 216

 Score = 61.6 bits (148), Expect = 4e-10
 Identities = 39/117 (33%), Positives = 62/117 (52%), Gaps = 9/117 (7%)

Query: 40  FLIMFLTIIVCGMVAALSAIRANC--HQEPSVCLQAA----CPESWIGFQRKCFYFSDDT 93
           F+ + + I    MV   SA+  N   +QE  + L  +    CP++WI ++  C+ F D++
Sbjct: 58  FIAVAMGIRFIIMVTIWSAVFLNSLFNQEVQIPLTESYCGPCPKNWICYKNNCYQFFDES 117

Query: 94  KNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSR-EQGQPWKWINGT 149
           KNW  SQ  C SQ+A L +V S ++ + L   K  S HW+GL        W+W +G+
Sbjct: 118 KNWYESQASCMSQNASLLKVYSKEDQDLLKLVK--SYHWMGLVHIPTNGSWQWEDGS 172


>gi|45580692 C-type lectin domain family 4, member C isoform 2 [Homo
           sapiens]
          Length = 182

 Score = 61.2 bits (147), Expect = 5e-10
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 73  AACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLR-YKGPSDH 131
           + CP  W  FQ  C++ S   ++WT SQ+ C    ADL  + + +E +F+++  K  S +
Sbjct: 50  SCCPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSY 109

Query: 132 WIGLSREQG-QPWKWINGTEWTRQLVMKEDG 161
           ++GLS   G + W+W++ T +   +     G
Sbjct: 110 FLGLSDPGGRRHWQWVDQTPYNENVTFWHSG 140


>gi|18466806 C-type lectin domain family 4, member C isoform 1 [Homo
           sapiens]
          Length = 213

 Score = 61.2 bits (147), Expect = 5e-10
 Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 2/91 (2%)

Query: 73  AACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLR-YKGPSDH 131
           + CP  W  FQ  C++ S   ++WT SQ+ C    ADL  + + +E +F+++  K  S +
Sbjct: 81  SCCPTPWTSFQSSCYFISTGMQSWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSY 140

Query: 132 WIGLSREQG-QPWKWINGTEWTRQLVMKEDG 161
           ++GLS   G + W+W++ T +   +     G
Sbjct: 141 FLGLSDPGGRRHWQWVDQTPYNENVTFWHSG 171


>gi|46409326 C-type lectin domain family 9, member A [Homo sapiens]
          Length = 241

 Score = 59.7 bits (143), Expect = 2e-09
 Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 5/80 (6%)

Query: 75  CPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNF----LLRYKGPSD 130
           CP +WI  +  C+Y S+    W +SQ  C  + + L Q+ES +E++F    L + KG  D
Sbjct: 113 CPNNWIQNRESCYYVSEIWSIWHTSQENCLKEGSTLLQIESKEEMDFITGSLRKIKGSYD 172

Query: 131 HWIGLSRE-QGQPWKWINGT 149
           +W+GLS++     W W +G+
Sbjct: 173 YWVGLSQDGHSGRWLWQDGS 192


>gi|4505501 oxidized low density lipoprotein (lectin-like) receptor
           1 [Homo sapiens]
          Length = 273

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 3/80 (3%)

Query: 73  AACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSD-- 130
           A CP+ WI     C+ FS  + NW  SQ  C S DA L ++ S  +L+F+ +    S   
Sbjct: 142 APCPQDWIWHGENCYLFSSGSFNWEKSQEKCLSLDAKLLKINSTADLDFIQQAISYSSFP 201

Query: 131 HWIGLSREQ-GQPWKWINGT 149
            W+GLSR     PW W +G+
Sbjct: 202 FWMGLSRRNPSYPWLWEDGS 221


>gi|75709169 killer cell lectin-like receptor subfamily C, member 2
           [Homo sapiens]
          Length = 231

 Score = 58.2 bits (139), Expect = 4e-09
 Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 5/102 (4%)

Query: 75  CPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIG 134
           CPE WI +   C+Y   + + W  S   C S+++ L  +++ +E+ FL      S  WIG
Sbjct: 117 CPEEWITYSNSCYYIGKERRTWEESLLACTSKNSSLLSIDNEEEMKFLASILPSS--WIG 174

Query: 135 LSREQG-QPWKWINGTEWTRQLVMKEDGANLYVAKVSQVPRM 175
           + R     PW  ING  + +  +   D A L  A V QV R+
Sbjct: 175 VFRNSSHHPWVTINGLAF-KHKIKDSDNAELNCA-VLQVNRL 214


>gi|18641360 collectin sub-family member 12 [Homo sapiens]
          Length = 742

 Score = 57.8 bits (138), Expect = 6e-09
 Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 2/77 (2%)

Query: 75  CPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYK-GPSDHWI 133
           CP  W  F  KC+YFS + + +  ++ FC+ + + L  + + +E  ++ +   G   HWI
Sbjct: 607 CPPHWKNFTDKCYYFSVEKEIFEDAKLFCEDKSSHLVFINTREEQQWIKKQMVGRESHWI 666

Query: 134 GLS-REQGQPWKWINGT 149
           GL+  E+   WKW++GT
Sbjct: 667 GLTDSERENEWKWLDGT 683


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.135    0.445 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,234,218
Number of Sequences: 37866
Number of extensions: 335708
Number of successful extensions: 896
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 93
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 741
Number of HSP's gapped (non-prelim): 151
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press