Search of human proteins with 133922609

Search of human proteins with 133922609

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|133922609 hypothetical protein LOC23383 [Homo sapiens]
         (613 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|133922609 hypothetical protein LOC23383 [Homo sapiens]            1232   0.0  
gi|148839305 structural maintenance of chromosomes flexible hing...    32   1.3  
gi|22749211 transmembrane and tetratricopeptide repeat containin...    32   1.7  
gi|157743243 phospholipase A2, group IIC [Homo sapiens]                32   2.2  
gi|157502179 tetratricopeptide repeat domain 21A isoform 1 [Homo...    31   2.9  
gi|157502177 tetratricopeptide repeat domain 21A isoform 2 [Homo...    31   2.9  
gi|83415184 transmembrane and tetratricopeptide repeat containin...    31   2.9  
gi|209976994 adenylate cyclase 10 [Homo sapiens]                       31   3.8  
gi|63053524 ubiquitin specific protease 1 [Homo sapiens]               31   3.8  
gi|63053522 ubiquitin specific protease 1 [Homo sapiens]               31   3.8  
gi|31543910 ubiquitin specific protease 1 [Homo sapiens]               31   3.8  
gi|188528675 slit homolog 1 [Homo sapiens]                             30   5.0  
gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform...    30   6.5  
gi|21735548 centrosomal protein 2 [Homo sapiens]                       30   6.5  
gi|111120318 NK6 transcription factor related, locus 1 [Homo sap...    30   8.5  
gi|15277417 capping protein alpha 3 [Homo sapiens]                     30   8.5  

>gi|133922609 hypothetical protein LOC23383 [Homo sapiens]
          Length = 613

 Score = 1232 bits (3187), Expect = 0.0
 Identities = 613/613 (100%), Positives = 613/613 (100%)

Query: 1   MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPP 60
           MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPP
Sbjct: 1   MAAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPPKIRLCVHCLQAVFPFKPP 60

Query: 61  QRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQE 120
           QRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQE
Sbjct: 61  QRIEARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQE 120

Query: 121 NSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGS 180
           NSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGS
Sbjct: 121 NSVDAAKPLLRKAIQISQQTPYWHCRLLFQLAQLHTLEKDLVSACDLLGVGAEYARVVGS 180

Query: 181 EYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHY 240
           EYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHY
Sbjct: 181 EYTRALFLLSKGMLLLMERKLQEVHPLLTLCGQIVENWQGNPIQKESLRVFFLVLQVTHY 240

Query: 241 LDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHS 300
           LDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHS
Sbjct: 241 LDAGQVKSVKPCLKQLQQCIQTISTLHDDEILPSNPADLFHWLPKEHMCVLVYLVTVMHS 300

Query: 301 MQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEI 360
           MQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEI
Sbjct: 301 MQAGYLEKAQKYTDKALMQLEKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEI 360

Query: 361 SQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT 420
           SQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT
Sbjct: 361 SQVCQLCQQSPRLFSNHAAQLHTLLGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVT 420

Query: 421 NLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKR 480
           NLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKR
Sbjct: 421 NLASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKR 480

Query: 481 FLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLW 540
           FLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLW
Sbjct: 481 FLRETLKMSNAEDLNRLTACSLVLLGHIFYVLGNHRESNNMVVPAMQLASKIPDMSVQLW 540

Query: 541 SSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQ 600
           SSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQ
Sbjct: 541 SSALLRDLNKACGNAMDAHEAAQMHQNFSQQLLQDHIEACSLPEHNLITWTDGPPPVQFQ 600

Query: 601 AQNGPNTSLASLL 613
           AQNGPNTSLASLL
Sbjct: 601 AQNGPNTSLASLL 613


>gi|148839305 structural maintenance of chromosomes flexible hinge
            domain containing 1 [Homo sapiens]
          Length = 2005

 Score = 32.3 bits (72), Expect = 1.3
 Identities = 23/101 (22%), Positives = 46/101 (45%), Gaps = 7/101 (6%)

Query: 74   VLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKA 133
            + Y+  K  +Q  +  ++   +SQ I  ++ +   +  LL+E+ CQ       +  LR  
Sbjct: 1612 MFYNDVKKQQQMAALTKEKDQLSQSIVMYKSLFEASQQLLNEMKCQVEEARLKEAQLRNE 1671

Query: 134  IQI-------SQQTPYWHCRLLFQLAQLHTLEKDLVSACDL 167
            ++I       +QQ P+    L  +L++   L+K    +C L
Sbjct: 1672 LKIHNIDIPTTQQVPHIEALLKRKLSEQEELKKKPRRSCTL 1712


>gi|22749211 transmembrane and tetratricopeptide repeat containing 2
           [Homo sapiens]
          Length = 836

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 21/150 (14%)

Query: 385 LGLYCVSVNCMDNAEAQFTTALRLTNHQELWAFIVTNLASVYIREGNRHQEVLYSLLERI 444
           LG    S + +  AE+ +  AL   ++    A ++ NL  + ++E +R  E L+      
Sbjct: 499 LGNVLKSQSKISEAESAYRNALYYRSNM---ADMLYNLG-LLLQENSRFAEALHY----- 549

Query: 445 NPDHSFPVSSHCLRAAAFYVRGLFSFFQGRYNEAKR-FLR------ETLKMSNAEDLNRL 497
              +   + S    A+A+   G+    QGR  EA+R FL+      E LK  +A   + +
Sbjct: 550 ---YKLAIGSRPTLASAYLNTGIILMNQGRTEEARRTFLKCSEIPDENLKDPHAHK-SSV 605

Query: 498 TACSLVLLGHIFYVLGNHRESNNMVVPAMQ 527
           T+C L  LG +++  G++ E+ ++   A+Q
Sbjct: 606 TSC-LYNLGKLYHEQGHYEEALSVYKEAIQ 634


>gi|157743243 phospholipase A2, group IIC [Homo sapiens]
          Length = 150

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 321 EKLKMLDCSPILSSFQVILLEHIIMCRLVTGHKATALQEISQVCQLCQQSPRLF 374
           EKLK   C P+L+S+Q  ++   ++C    G  A+    + + C+  +QS   F
Sbjct: 71  EKLKEFSCQPVLNSYQFHIVNGAVVCGCTLGPGASCHCRL-KACECDKQSVHCF 123


>gi|157502179 tetratricopeptide repeat domain 21A isoform 1 [Homo
            sapiens]
          Length = 1321

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 76   YHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQ 135
            Y   K   +AR  L++       + + ED++ ++  LL+++YCQ +  D A  LLR+ +Q
Sbjct: 1172 YVFLKQIPKARMQLKRLAKTPWVLSEAEDLE-KSWLLLADIYCQGSKFDLALELLRRCVQ 1230

Query: 136  ISQ 138
             ++
Sbjct: 1231 YNK 1233


>gi|157502177 tetratricopeptide repeat domain 21A isoform 2 [Homo
            sapiens]
          Length = 1320

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 76   YHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKAIQ 135
            Y   K   +AR  L++       + + ED++ ++  LL+++YCQ +  D A  LLR+ +Q
Sbjct: 1171 YVFLKQIPKARMQLKRLAKTPWVLSEAEDLE-KSWLLLADIYCQGSKFDLALELLRRCVQ 1229

Query: 136  ISQ 138
             ++
Sbjct: 1230 YNK 1232


>gi|83415184 transmembrane and tetratricopeptide repeat containing 1
           [Homo sapiens]
          Length = 774

 Score = 31.2 bits (69), Expect = 2.9
 Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 23/150 (15%)

Query: 22  ADSWYLALLGFAEHFRTSSP--------PKIRLCVHCLQAVFPFKPPQRIEARTHLQLGS 73
           A+ WY   L  A      SP         +    +   Q     +P QR E R  L    
Sbjct: 561 AEEWYKRALQVAHKAEILSPLGALYYNTGRYEEALQIYQEAAALQPSQR-ELRLALAQVL 619

Query: 74  VLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAKPLLRKA 133
            +   TK +E+  +H+     +S+     E    E   LLS +Y ++ + D A   + KA
Sbjct: 620 AVMGQTKEAEKMTNHI-----VSE-----ETGCLECYRLLSAIYSKQENHDKALDAIDKA 669

Query: 134 IQISQQTPYWHCRLLF----QLAQLHTLEK 159
           +Q+  + P     L F    QL + + L+K
Sbjct: 670 LQLKPKDPKVISELFFTKGNQLREQNLLDK 699


>gi|209976994 adenylate cyclase 10 [Homo sapiens]
          Length = 1610

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 26/85 (30%), Positives = 43/85 (50%), Gaps = 16/85 (18%)

Query: 422  LASVYIREGNRHQEVLYSLLERINPDHSFPVSSHCLRAAAFY-VRGLFSFFQGRYNEAKR 480
            +A +Y+ EG +       LL+ +  D S+   S    +A FY ++G   F  G+   AK+
Sbjct: 1103 MAYMYLNEGQK-------LLKTLKKDKSW---SQTFESATFYSLKGEVCFNMGQIVLAKK 1152

Query: 481  FLRETLKMSNAEDLNRLTACSLVLL 505
             LR+ LK+     LNR+   +L+ L
Sbjct: 1153 MLRKALKL-----LNRIFPYNLISL 1172


>gi|63053524 ubiquitin specific protease 1 [Homo sapiens]
          Length = 785

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 286 EHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKL--KMLDCSPILSSFQVILLEHI 343
           E +C L  L+  +  +QA +L   +KYTD+   Q  +L   + + +P+   +     + +
Sbjct: 144 ELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMYEGYLQHDAQEV 203

Query: 344 IMCRLVTGHKATALQEISQVCQLCQQ 369
           + C          L  I + CQL ++
Sbjct: 204 LQC---------ILGNIQETCQLLKK 220


>gi|63053522 ubiquitin specific protease 1 [Homo sapiens]
          Length = 785

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 286 EHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKL--KMLDCSPILSSFQVILLEHI 343
           E +C L  L+  +  +QA +L   +KYTD+   Q  +L   + + +P+   +     + +
Sbjct: 144 ELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMYEGYLQHDAQEV 203

Query: 344 IMCRLVTGHKATALQEISQVCQLCQQ 369
           + C          L  I + CQL ++
Sbjct: 204 LQC---------ILGNIQETCQLLKK 220


>gi|31543910 ubiquitin specific protease 1 [Homo sapiens]
          Length = 785

 Score = 30.8 bits (68), Expect = 3.8
 Identities = 20/86 (23%), Positives = 39/86 (45%), Gaps = 11/86 (12%)

Query: 286 EHMCVLVYLVTVMHSMQAGYLEKAQKYTDKALMQLEKL--KMLDCSPILSSFQVILLEHI 343
           E +C L  L+  +  +QA +L   +KYTD+   Q  +L   + + +P+   +     + +
Sbjct: 144 ELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRRLLNTLRELNPMYEGYLQHDAQEV 203

Query: 344 IMCRLVTGHKATALQEISQVCQLCQQ 369
           + C          L  I + CQL ++
Sbjct: 204 LQC---------ILGNIQETCQLLKK 220


>gi|188528675 slit homolog 1 [Homo sapiens]
          Length = 1534

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 13/41 (31%), Positives = 26/41 (63%)

Query: 87  SHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAK 127
           +HL+K  L + ++ + ED  FE A+ +SEL+   N +++ +
Sbjct: 565 THLKKINLSNNKVSEIEDGAFEGAASVSELHLTANQLESIR 605


>gi|5031633 FERM, RhoGEF, and pleckstrin domain protein 1 isoform 1
           [Homo sapiens]
          Length = 1045

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 23/75 (30%), Positives = 35/75 (46%), Gaps = 11/75 (14%)

Query: 153 QLHTLEKDLVSACDLLGVGAEYAR------VVGSEYTRALFLLSKGMLLLMERKLQ---- 202
           +LH L+KDL+   +L+  G E+ R      + G    + +F L   +LL   R L     
Sbjct: 739 KLHELKKDLIGIDNLVVPGREFIRLGSLSKLSGKGLQQRMFFLFNDVLLYTSRGLTASNQ 798

Query: 203 -EVHPLLTLCGQIVE 216
            +VH  L L G  +E
Sbjct: 799 FKVHGQLPLYGMTIE 813


>gi|21735548 centrosomal protein 2 [Homo sapiens]
          Length = 2442

 Score = 30.0 bits (66), Expect = 6.5
 Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 23/214 (10%)

Query: 64   EARTHLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSV 123
            +++ H +L  +    ++N E+      K   +  ++ +  +      S L     Q    
Sbjct: 1280 KSQVHTELQDLQRQLSQNQEEKSKWEGKQNSLESELMELHETMASLQSRLRRAELQRMEA 1339

Query: 124  DAAKPLLRKAIQ-ISQQTPYWHCRLLFQLAQLHT---LEKDLVSACDLLGVGAEYARVVG 179
               + LL+ A + ++ Q  +    ++   AQ      LE+DL +A   L +  E    V 
Sbjct: 1340 QGERELLQAAKENLTAQVEHLQAAVVEARAQASAAGILEEDLRTARSALKLKNEE---VE 1396

Query: 180  SEYTRALFLLSKGMLLLMERK-LQEVHPLLT------------LCGQIVENWQGNPIQKE 226
            SE  RA  L  +G L + + K LQE   LLT            L GQI E  +   +QK 
Sbjct: 1397 SERERAQALQEQGELKVAQGKALQENLALLTQTLAEREEEVETLRGQIQELEKQREMQKA 1456

Query: 227  SLRVFFLVLQVTHY---LDAGQVKSVKPCLKQLQ 257
            +L +  L L+  +    L   Q++ ++ C   L+
Sbjct: 1457 ALELLSLDLKKRNQEVDLQQEQIQELEKCRSVLE 1490


>gi|111120318 NK6 transcription factor related, locus 1 [Homo
           sapiens]
          Length = 367

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 2   AAQAAAAAQAAAAQAAQAEAADSWYLALLGFAEHFRTSSPP 42
           ++ +A++A AAAA AA A AA S    LL     F + SPP
Sbjct: 129 SSASASSASAAAAAAAAAAAAASSPAGLLAGLPRFSSLSPP 169


>gi|15277417 capping protein alpha 3 [Homo sapiens]
          Length = 299

 Score = 29.6 bits (65), Expect = 8.5
 Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 9/84 (10%)

Query: 68  HLQLGSVLYHHTKNSEQARSHLEKAWLISQQIPQFEDVKFEAASLLSELYCQENSVDAAK 127
           H+++   L    +   QA+  L  A L+ +Q  +F+      A++L EL  QE S +A +
Sbjct: 202 HIEISKDLKESLEIVNQAQLALSFARLVEEQENKFQ------AAVLEEL--QELSNEALR 253

Query: 128 PLLRKAIQISQQTPYWHCRLLFQL 151
            +LR+ + +++    WH R+L  L
Sbjct: 254 KILRRDLPVTRTLIDWH-RILSDL 276


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.323    0.133    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,530,562
Number of Sequences: 37866
Number of extensions: 934115
Number of successful extensions: 4106
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 4083
Number of HSP's gapped (non-prelim): 27
length of query: 613
length of database: 18,247,518
effective HSP length: 108
effective length of query: 505
effective length of database: 14,157,990
effective search space: 7149784950
effective search space used: 7149784950
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.