Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 13377002

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13377002 crystallin, gamma D [Homo sapiens]
         (174 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13377002 crystallin, gamma D [Homo sapiens]                        375   e-104
gi|148491074 crystallin, gamma B [Homo sapiens]                       283   5e-77
gi|148491057 crystallin, gamma A [Homo sapiens]                       278   2e-75
gi|10518338 crystallin, gamma C [Homo sapiens]                        273   5e-74
gi|8922120 crystallin, gamma S [Homo sapiens]                         199   1e-51
gi|89886227 absent in melanoma 1-like [Homo sapiens]                  110   5e-25
gi|4758074 crystallin, beta B3 [Homo sapiens]                         106   1e-23
gi|12056461 crystallin, beta A3 [Homo sapiens]                        104   3e-23
gi|4503061 crystallin, beta B1 [Homo sapiens]                         103   8e-23
gi|4503063 crystallin, beta B2 [Homo sapiens]                         103   1e-22
gi|4503059 crystallin, beta A4 [Homo sapiens]                          95   3e-20
gi|21389517 gammaN-crystallin [Homo sapiens]                           92   2e-19
gi|16936542 crystallin, beta A2 [Homo sapiens]                         89   2e-18
gi|16936540 crystallin, beta A2 [Homo sapiens]                         89   2e-18
gi|7019357 crystallin, beta A2 [Homo sapiens]                          89   2e-18
gi|62988361 absent in melanoma 1 [Homo sapiens]                        89   2e-18
gi|90403579 beta-gamma crystallin domain containing 3 [Homo sapi...    82   2e-16
gi|164420681 methionyl aminopeptidase 1 [Homo sapiens]                 29   2.3  
gi|42734438 hypothetical protein LOC51571 [Homo sapiens]               28   5.2  

>gi|13377002 crystallin, gamma D [Homo sapiens]
          Length = 174

 Score =  375 bits (963), Expect = e-104
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
           MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR
Sbjct: 1   MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60

Query: 61  GDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNE 120
           GDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNE
Sbjct: 61  GDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNE 120

Query: 121 IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS 174
           IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS
Sbjct: 121 IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVIDFS 174


>gi|148491074 crystallin, gamma B [Homo sapiens]
          Length = 175

 Score =  283 bits (724), Expect = 5e-77
 Identities = 126/173 (72%), Positives = 150/173 (86%), Gaps = 1/173 (0%)

Query: 1   MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
           MGKIT YEDR FQGR YEC++D PNLQPY SRCNS RV+SGCWM+YE+PNY G QYFLRR
Sbjct: 1   MGKITFYEDRAFQGRSYECTTDCPNLQPYFSRCNSIRVESGCWMIYERPNYQGHQYFLRR 60

Query: 61  GDYADHQQWMGLSDSVRSCRLI-PHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFN 119
           G+Y D+QQWMGLSDS+RSC LI PHSG++R+++Y+R++ RGQM E T+DC  +QDRF   
Sbjct: 61  GEYPDYQQWMGLSDSIRSCCLIPPHSGAYRMKIYDRDELRGQMSELTDDCISVQDRFHLT 120

Query: 120 EIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
           EIHSLNVLEGSW+LYE+ NYRGRQYLL PG+YRR+ DWGA NA+VGSLRRV+D
Sbjct: 121 EIHSLNVLEGSWILYEMPNYRGRQYLLRPGEYRRFLDWGAPNAKVGSLRRVMD 173


>gi|148491057 crystallin, gamma A [Homo sapiens]
          Length = 174

 Score =  278 bits (711), Expect = 2e-75
 Identities = 125/172 (72%), Positives = 143/172 (83%)

Query: 1   MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
           MGKIT YEDR FQGR Y C SD PNL+ Y SRCNS RVDSGCWMLYE+PNY G QYFLRR
Sbjct: 1   MGKITFYEDRDFQGRCYNCISDCPNLRVYFSRCNSIRVDSGCWMLYERPNYQGHQYFLRR 60

Query: 61  GDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNE 120
           G Y D+Q WMGLSDSV+SCR+IPH+ SH++RLYER+DYRG M E T+DC+C+ + FR  E
Sbjct: 61  GKYPDYQHWMGLSDSVQSCRIIPHTSSHKLRLYERDDYRGLMSELTDDCACVPELFRLPE 120

Query: 121 IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
           I+SL+VLEG WVLYE+ NYRGRQYLL PGDYRRY DWG  +A+VGSLRRV D
Sbjct: 121 IYSLHVLEGCWVLYEMPNYRGRQYLLRPGDYRRYHDWGGADAKVGSLRRVTD 172


>gi|10518338 crystallin, gamma C [Homo sapiens]
          Length = 174

 Score =  273 bits (698), Expect = 5e-74
 Identities = 124/172 (72%), Positives = 144/172 (83%)

Query: 1   MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
           MGKIT YEDR FQGR YE ++D PNLQPY SRCNS RV+SGCWMLYE+PNY G QY LRR
Sbjct: 1   MGKITFYEDRAFQGRSYETTTDCPNLQPYFSRCNSIRVESGCWMLYERPNYQGQQYLLRR 60

Query: 61  GDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNE 120
           G+Y D+QQWMGLSDS+RSC LIP + SHR+RLYERED++G M+E +EDC  +QDRF  +E
Sbjct: 61  GEYPDYQQWMGLSDSIRSCCLIPQTVSHRLRLYEREDHKGLMMELSEDCPSIQDRFHLSE 120

Query: 121 IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
           I SL+VLEG WVLYEL NYRGRQYLL P +YRR QDWGA +A+ GSLRRV+D
Sbjct: 121 IRSLHVLEGCWVLYELPNYRGRQYLLRPQEYRRCQDWGAMDAKAGSLRRVVD 172


>gi|8922120 crystallin, gamma S [Homo sapiens]
          Length = 178

 Score =  199 bits (505), Expect = 1e-51
 Identities = 86/172 (50%), Positives = 120/172 (69%), Gaps = 2/172 (1%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGD 62
           KIT YED+ FQGR Y+C  D  +   YLSRCNS +V+ G W +YE+PN++G  Y L +G+
Sbjct: 7   KITFYEDKNFQGRRYDCDCDCADFHTYLSRCNSIKVEGGTWAVYERPNFAGYMYILPQGE 66

Query: 63  YADHQQWMGLSDSVRSCRLI--PHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNE 120
           Y ++Q+WMGL+D + SCR +  P  G ++I+++E+ D+ GQM E TEDC  + ++F   E
Sbjct: 67  YPEYQRWMGLNDRLSSCRAVHLPSGGQYKIQIFEKGDFSGQMYETTEDCPSIMEQFHMRE 126

Query: 121 IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
           IHS  VLEG W+ YEL NYRGRQYLL   +YR+  DWGA +  V S RR+++
Sbjct: 127 IHSCKVLEGVWIFYELPNYRGRQYLLDKKEYRKPIDWGAASPAVQSFRRIVE 178


>gi|89886227 absent in melanoma 1-like [Homo sapiens]
          Length = 616

 Score =  110 bits (276), Expect = 5e-25
 Identities = 62/177 (35%), Positives = 93/177 (52%), Gaps = 8/177 (4%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNLQ-------PYLSRCNSARVDSGCWMLYEQPNYSGLQ 55
           +  +YE  GFQGR +E S D  NLQ       P+L+   S RV  GCW+ YE+  + G Q
Sbjct: 124 RAVVYEAPGFQGRSWEVSRDIYNLQQPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGHQ 183

Query: 56  YFLRRGDYADHQQWMGLSDSVRSCRLI-PHSGSHRIRLYEREDYRGQMIEFTEDCSCLQD 114
           Y L  G+Y D   W G  + + S R+I    G   + L+E  D+ G  +E ++    ++ 
Sbjct: 184 YLLEEGEYPDWSHWGGYDELLTSLRVIRTDFGDPAVVLFEAMDFEGHGVEVSKALPDVEL 243

Query: 115 RFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVI 171
                   +++VL G WV Y+   + G QY+L  G YR  +DWGA N+ + SL+ V+
Sbjct: 244 VQHGPSTQAIHVLSGVWVAYQEVGFSGEQYVLEKGVYRNCEDWGAGNSTLASLQPVL 300



 Score = 82.0 bits (201), Expect = 2e-16
 Identities = 55/180 (30%), Positives = 80/180 (44%), Gaps = 14/180 (7%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNLQPYLS--RCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
           +I+L+ + G +G   + +    N Q      +  SA V +G W+LY +P +    Y L  
Sbjct: 29  EISLFSEEGLKGEQVKLTEALKNSQGLEKPLQVASATVSAGLWLLYPKPLFEDTPYILEP 88

Query: 61  GDYADHQQWMGLSDSVRS-------CRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQ 113
           G+Y   + W     SV S       C  +   G  R  +YE   ++G+  E + D   LQ
Sbjct: 89  GEYPTSEAWGTSDPSVGSLKPMRLGCPSVEKPGEPRAVVYEAPGFQGRSWEVSRDIYNLQ 148

Query: 114 DRFRFNEIH-----SLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLR 168
                   H     SL VL G WV YE   +RG QYLL  G+Y  +  WG  +  + SLR
Sbjct: 149 QPEDSQSPHLASVGSLRVLGGCWVGYEKEGFRGHQYLLEEGEYPDWSHWGGYDELLTSLR 208



 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 50/176 (28%), Positives = 88/176 (50%), Gaps = 12/176 (6%)

Query: 4   ITLYEDRGFQGRHYECSSDHPNLQ--PYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61
           + L+E   F+G   E S   P+++   +     +  V SG W+ Y++  +SG QY L +G
Sbjct: 219 VVLFEAMDFEGHGVEVSKALPDVELVQHGPSTQAIHVLSGVWVAYQEVGFSGEQYVLEKG 278

Query: 62  DYADHQQWMGLSDSVRSCRLIPHSGSH------RIRLYEREDYRGQMIEFTEDCSCLQDR 115
            Y + + W   + ++ S + +   G H      +I+L+ R D+ G    F +D + L   
Sbjct: 279 VYRNCEDWGAGNSTLASLQPVLQVGEHDLHFVSKIQLFSRPDFLGDHFSFEDDQAALPAS 338

Query: 116 FRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARV-GSLRRV 170
           FR     S  V  GSW+L++ +N+ G Q++L  G++      G   + V GSL++V
Sbjct: 339 FR---PQSCRVHGGSWILFDETNFEGDQHILSEGEFPTLTAMGCLASTVLGSLQKV 391



 Score = 74.7 bits (182), Expect = 4e-14
 Identities = 52/169 (30%), Positives = 81/169 (47%), Gaps = 4/169 (2%)

Query: 1   MGKITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
           + KI L+    F G H+    D   L P   R  S RV  G W+L+++ N+ G Q+ L  
Sbjct: 310 VSKIQLFSRPDFLGDHFSFEDDQAAL-PASFRPQSCRVHGGSWILFDETNFEGDQHILSE 368

Query: 61  GDYADHQQWMGLSDSVRSC--RLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRF 118
           G++        L+ +V     ++  H     I LY  E + G+ IE + +   LQ     
Sbjct: 369 GEFPTLTAMGCLASTVLGSLQKVSLHFSEPSIFLYGLECFEGKEIELSREVRSLQAEGFN 428

Query: 119 NEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSL 167
           N + S+ +  G WVL E S++RGRQ+L+   +   +  +  T  RVGSL
Sbjct: 429 NHVLSVRIKGGIWVLCEHSDFRGRQWLVGSCEITNWLTYSGTQ-RVGSL 476



 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 25/89 (28%), Positives = 44/89 (49%)

Query: 80  RLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNY 139
           R++    +  I L+  E  +G+ ++ TE     Q   +  ++ S  V  G W+LY    +
Sbjct: 20  RVVWDYSTPEISLFSEEGLKGEQVKLTEALKNSQGLEKPLQVASATVSAGLWLLYPKPLF 79

Query: 140 RGRQYLLMPGDYRRYQDWGATNARVGSLR 168
               Y+L PG+Y   + WG ++  VGSL+
Sbjct: 80  EDTPYILEPGEYPTSEAWGTSDPSVGSLK 108


>gi|4758074 crystallin, beta B3 [Homo sapiens]
          Length = 211

 Score =  106 bits (264), Expect = 1e-23
 Identities = 60/180 (33%), Positives = 93/180 (51%), Gaps = 15/180 (8%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNL-QPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61
           K+ LYE   FQG+  E S++ P+L    L +  S +V+SG W+ +E   + G Q+ L +G
Sbjct: 25  KVILYELENFQGKRCELSAECPSLTDSLLEKVGSIQVESGPWLAFESRAFRGEQFVLEKG 84

Query: 62  DYADHQQWMGLSDSVRSCRLIP---HSGSHRIRLYEREDYRGQMIEFTED------CSCL 112
           DY     W    DS     L P    S  H++ L+E   + G+ +E  +D          
Sbjct: 85  DYPRWDAWSNSRDSDSLLSLRPLNIDSPHHKLHLFENPAFSGRKMEIVDDDVPSLWAHGF 144

Query: 113 QDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
           QDR     + S+  + G+WV YE   YRGRQY+   G+YR + +W A+  ++ S+RR+ D
Sbjct: 145 QDR-----VASVRAINGTWVGYEFPGYRGRQYVFERGEYRHWNEWDASQPQLQSVRRIRD 199



 Score = 57.8 bits (138), Expect = 5e-09
 Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%)

Query: 86  GSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYL 145
           GS+++ LYE E+++G+  E + +C  L D     ++ S+ V  G W+ +E   +RG Q++
Sbjct: 22  GSYKVILYELENFQGKRCELSAECPSLTDSL-LEKVGSIQVESGPWLAFESRAFRGEQFV 80

Query: 146 LMPGDYRRYQDW 157
           L  GDY R+  W
Sbjct: 81  LEKGDYPRWDAW 92



 Score = 50.8 bits (120), Expect = 6e-07
 Identities = 30/90 (33%), Positives = 42/90 (46%), Gaps = 3/90 (3%)

Query: 3   KITLYEDRGFQGRHYECSSDH-PNL--QPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLR 59
           K+ L+E+  F GR  E   D  P+L    +  R  S R  +G W+ YE P Y G QY   
Sbjct: 115 KLHLFENPAFSGRKMEIVDDDVPSLWAHGFQDRVASVRAINGTWVGYEFPGYRGRQYVFE 174

Query: 60  RGDYADHQQWMGLSDSVRSCRLIPHSGSHR 89
           RG+Y    +W      ++S R I     H+
Sbjct: 175 RGEYRHWNEWDASQPQLQSVRRIRDQKWHK 204


>gi|12056461 crystallin, beta A3 [Homo sapiens]
          Length = 215

 Score =  104 bits (260), Expect = 3e-23
 Identities = 61/183 (33%), Positives = 103/183 (56%), Gaps = 16/183 (8%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNL-QPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61
           KIT+Y+   FQG+  E +S  PN+ +       S +V+SG W+ YE  ++ G Q+ L RG
Sbjct: 32  KITIYDQENFQGKRMEFTSSCPNVSERSFDNVRSLKVESGAWIGYEHTSFCGQQFILERG 91

Query: 62  DYADHQQWMGLSDSVRSCRLIPH----SGSH---RIRLYEREDYRGQMIEFTEDCSCLQD 114
           +Y     W G S++    RL+      S +H   ++ ++E+E++ G+  E ++D   LQ 
Sbjct: 92  EYPRWDAWSG-SNAYHIERLMSFRPICSANHKESKMTIFEKENFIGRQWEISDDYPSLQA 150

Query: 115 RFRF-NEIHSLNVLEGSWVLYELSNYRGRQYLL----MPGDYRRYQDWG--ATNARVGSL 167
              F NE+ S+ +  G+WV Y+   YRG QY+L      GDY+ +++WG  A  +++ S+
Sbjct: 151 MGWFNNEVGSMKIQSGAWVCYQYPGYRGYQYILECDHHGGDYKHWREWGSHAQTSQIQSI 210

Query: 168 RRV 170
           RR+
Sbjct: 211 RRI 213



 Score = 65.1 bits (157), Expect = 3e-11
 Identities = 27/77 (35%), Positives = 51/77 (66%), Gaps = 1/77 (1%)

Query: 86  GSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYL 145
           G  +I +Y++E+++G+ +EFT  C  + +R  F+ + SL V  G+W+ YE +++ G+Q++
Sbjct: 29  GPWKITIYDQENFQGKRMEFTSSCPNVSER-SFDNVRSLKVESGAWIGYEHTSFCGQQFI 87

Query: 146 LMPGDYRRYQDWGATNA 162
           L  G+Y R+  W  +NA
Sbjct: 88  LERGEYPRWDAWSGSNA 104


>gi|4503061 crystallin, beta B1 [Homo sapiens]
          Length = 252

 Score =  103 bits (257), Expect = 8e-23
 Identities = 62/178 (34%), Positives = 95/178 (53%), Gaps = 11/178 (6%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNLQPY-LSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61
           ++ ++E   FQGR  E S +  NL      R  S  V +G W+ +EQ N+ G  + L +G
Sbjct: 60  RLVVFELENFQGRRAEFSGECSNLADRGFDRVRSIIVSAGPWVAFEQSNFRGEMFILEKG 119

Query: 62  DYADHQQWMGLSDSVRSCRLIPH------SGSHRIRLYEREDYRGQMIEFTEDCSCLQDR 115
           +Y     W   S S RS RL+        +  H+I L+E  +++G  IE   D +     
Sbjct: 120 EYPRWNTW---SSSYRSDRLMSFRPIKMDAQEHKISLFEGANFKGNTIEIQGDDAPSLWV 176

Query: 116 FRFNE-IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
           + F++ + S+ V  G+WV Y+   YRG QYLL PGD+R + +WGA   ++ SLRR+ D
Sbjct: 177 YGFSDRVGSVKVSSGTWVGYQYPGYRGYQYLLEPGDFRHWNEWGAFQPQMQSLRRLRD 234



 Score = 66.2 bits (160), Expect = 1e-11
 Identities = 31/86 (36%), Positives = 55/86 (63%), Gaps = 3/86 (3%)

Query: 75  SVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLY 134
           S ++  L P  G++R+ ++E E+++G+  EF+ +CS L DR  F+ + S+ V  G WV +
Sbjct: 48  SAKAAELPP--GNYRLVVFELENFQGRRAEFSGECSNLADR-GFDRVRSIIVSAGPWVAF 104

Query: 135 ELSNYRGRQYLLMPGDYRRYQDWGAT 160
           E SN+RG  ++L  G+Y R+  W ++
Sbjct: 105 EQSNFRGEMFILEKGEYPRWNTWSSS 130


>gi|4503063 crystallin, beta B2 [Homo sapiens]
          Length = 205

 Score =  103 bits (256), Expect = 1e-22
 Identities = 62/175 (35%), Positives = 93/175 (53%), Gaps = 5/175 (2%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNLQPY-LSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61
           KI ++E   FQG  +E +   PNL+   + +  S  V +G W+ YEQ N  G Q+   +G
Sbjct: 18  KIIIFEQENFQGHSHELNGPCPNLKETGVEKAGSVLVQAGPWVGYEQANCKGEQFVFEKG 77

Query: 62  DYADHQQWMGL--SDSVRSCRLIP-HSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRF 118
           +Y     W     +DS+ S R I   S  H+I LYE  ++ G+ +E  +D         +
Sbjct: 78  EYPRWDSWTSSRRTDSLSSLRPIKVDSQEHKIILYENPNFTGKKMEIIDDDVPSFHAHGY 137

Query: 119 NE-IHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVID 172
            E + S+ V  G+WV Y+   YRG QYLL  GDY+   D+GA + +V S+RR+ D
Sbjct: 138 QEKVSSVRVQSGTWVGYQYPGYRGLQYLLEKGDYKDSSDFGAPHPQVQSVRRIRD 192



 Score = 46.2 bits (108), Expect = 1e-05
 Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 2/85 (2%)

Query: 83  PHSGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGR 142
           P S + +I ++E+E+++G   E    C  L++     +  S+ V  G WV YE +N +G 
Sbjct: 12  PQSLNPKIIIFEQENFQGHSHELNGPCPNLKET-GVEKAGSVLVQAGPWVGYEQANCKGE 70

Query: 143 QYLLMPGDYRRYQDWGATNARVGSL 167
           Q++   G+Y R+  W  ++ R  SL
Sbjct: 71  QFVFEKGEYPRWDSW-TSSRRTDSL 94


>gi|4503059 crystallin, beta A4 [Homo sapiens]
          Length = 196

 Score = 95.1 bits (235), Expect = 3e-20
 Identities = 59/183 (32%), Positives = 98/183 (53%), Gaps = 16/183 (8%)

Query: 3   KITLYEDRGFQGRHYECSSDHPN-LQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61
           K+ ++++ GFQGR +E +++ P+ L+       S +V SG W+ +E   + G QY L RG
Sbjct: 13  KMVVWDEDGFQGRRHEFTAECPSVLELGFETVRSLKVLSGAWVGFEHAGFQGQQYILERG 72

Query: 62  DYADHQQWMGLS-------DSVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQD 114
           +Y     W G +        S R      H  S R+ ++E+E++ G+  E ++D   LQ 
Sbjct: 73  EYPSWDAWGGNTAYPAERLTSFRPAACANHRDS-RLTIFEQENFLGKKGELSDDYPSLQA 131

Query: 115 R-FRFNEIHSLNVLEGSWVLYELSNYRGRQYLL----MPGDYRRYQDWG--ATNARVGSL 167
             +  NE+ S +V  G+WV  +   YRG QY+L      GDY+ +++WG  A   +V S+
Sbjct: 132 MGWEGNEVGSFHVHSGAWVCSQFPGYRGFQYVLECDHHSGDYKHFREWGSHAPTFQVQSI 191

Query: 168 RRV 170
           RR+
Sbjct: 192 RRI 194



 Score = 56.2 bits (134), Expect = 1e-08
 Identities = 24/78 (30%), Positives = 47/78 (60%), Gaps = 1/78 (1%)

Query: 85  SGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQY 144
           +G  ++ +++ + ++G+  EFT +C  + +   F  + SL VL G+WV +E + ++G+QY
Sbjct: 9   AGPWKMVVWDEDGFQGRRHEFTAECPSVLE-LGFETVRSLKVLSGAWVGFEHAGFQGQQY 67

Query: 145 LLMPGDYRRYQDWGATNA 162
           +L  G+Y  +  WG   A
Sbjct: 68  ILERGEYPSWDAWGGNTA 85


>gi|21389517 gammaN-crystallin [Homo sapiens]
          Length = 182

 Score = 92.4 bits (228), Expect = 2e-19
 Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 3/117 (2%)

Query: 2   GKITLYEDRGFQGRHYECSSDHPNLQP--YLSRCNSARVDSGCWMLYEQPNYSGLQYFLR 59
           GKITLYE + F G+  E   D  N Q   +++R NS  V+SG W+ +  P++ G Q+ L 
Sbjct: 6   GKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFILE 65

Query: 60  RGDYADHQQWMGLSDSVRSCRLIPHSGSH-RIRLYEREDYRGQMIEFTEDCSCLQDR 115
            GDY D  +W   SD + SCR +   G H R+ ++E  ++ GQ +EF ED   LQ R
Sbjct: 66  HGDYPDFFRWNSHSDHMGSCRPVGMHGEHFRLEIFEGCNFTGQCLEFLEDSPFLQSR 122



 Score = 66.2 bits (160), Expect = 1e-11
 Identities = 31/84 (36%), Positives = 50/84 (59%)

Query: 87  SHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLL 146
           S +I LYE + + GQ +E   DC   QDR   N ++S++V  G+WV +   ++RG+Q++L
Sbjct: 5   SGKITLYEGKHFTGQKLEVFGDCDNFQDRGFMNRVNSIHVESGAWVCFNHPDFRGQQFIL 64

Query: 147 MPGDYRRYQDWGATNARVGSLRRV 170
             GDY  +  W + +  +GS R V
Sbjct: 65  EHGDYPDFFRWNSHSDHMGSCRPV 88


>gi|16936542 crystallin, beta A2 [Homo sapiens]
          Length = 197

 Score = 88.6 bits (218), Expect = 2e-18
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 16/181 (8%)

Query: 4   ITLYEDRGFQGRHYECSSDHPNL--QPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61
           +TL+++  FQGR     SD  N+  +  L R  S +V++G W+ +E P++ G Q+ L +G
Sbjct: 14  LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73

Query: 62  DYADHQQWMGLSD-------SVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQD 114
           DY     W G S        S R      H+ S R+ L+E ++++G   +  +D   L  
Sbjct: 74  DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDS-RVTLFEGDNFQGCKFDLVDDYPSLPS 132

Query: 115 R-FRFNEIHSLNVLEGSWVLYELSNYRGRQYLL----MPGDYRRYQDWGATNARVGSLRR 169
             +   ++ SL V  G+WV Y+   YRG QY+L      G++  Y + G T A  G L+ 
Sbjct: 133 MGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELG-TQAHTGQLQS 191

Query: 170 V 170
           +
Sbjct: 192 I 192



 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNL--QPYLSR-CNSARVDSGCWMLYEQPNYSGLQYFLR 59
           ++TL+E   FQG  ++   D+P+L    + S+   S +V SG W+ Y+ P Y G QY L 
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166

Query: 60  R 60
           R
Sbjct: 167 R 167


>gi|16936540 crystallin, beta A2 [Homo sapiens]
          Length = 197

 Score = 88.6 bits (218), Expect = 2e-18
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 16/181 (8%)

Query: 4   ITLYEDRGFQGRHYECSSDHPNL--QPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61
           +TL+++  FQGR     SD  N+  +  L R  S +V++G W+ +E P++ G Q+ L +G
Sbjct: 14  LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73

Query: 62  DYADHQQWMGLSD-------SVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQD 114
           DY     W G S        S R      H+ S R+ L+E ++++G   +  +D   L  
Sbjct: 74  DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDS-RVTLFEGDNFQGCKFDLVDDYPSLPS 132

Query: 115 R-FRFNEIHSLNVLEGSWVLYELSNYRGRQYLL----MPGDYRRYQDWGATNARVGSLRR 169
             +   ++ SL V  G+WV Y+   YRG QY+L      G++  Y + G T A  G L+ 
Sbjct: 133 MGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELG-TQAHTGQLQS 191

Query: 170 V 170
           +
Sbjct: 192 I 192



 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNL--QPYLSR-CNSARVDSGCWMLYEQPNYSGLQYFLR 59
           ++TL+E   FQG  ++   D+P+L    + S+   S +V SG W+ Y+ P Y G QY L 
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166

Query: 60  R 60
           R
Sbjct: 167 R 167


>gi|7019357 crystallin, beta A2 [Homo sapiens]
          Length = 197

 Score = 88.6 bits (218), Expect = 2e-18
 Identities = 56/181 (30%), Positives = 91/181 (50%), Gaps = 16/181 (8%)

Query: 4   ITLYEDRGFQGRHYECSSDHPNL--QPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRG 61
           +TL+++  FQGR     SD  N+  +  L R  S +V++G W+ +E P++ G Q+ L +G
Sbjct: 14  LTLWDEEDFQGRRCRLLSDCANVCERGGLPRVRSVKVENGVWVAFEYPDFQGQQFILEKG 73

Query: 62  DYADHQQWMGLSD-------SVRSCRLIPHSGSHRIRLYEREDYRGQMIEFTEDCSCLQD 114
           DY     W G S        S R      H+ S R+ L+E ++++G   +  +D   L  
Sbjct: 74  DYPRWSAWSGSSSHNSNQLLSFRPVLCANHNDS-RVTLFEGDNFQGCKFDLVDDYPSLPS 132

Query: 115 R-FRFNEIHSLNVLEGSWVLYELSNYRGRQYLL----MPGDYRRYQDWGATNARVGSLRR 169
             +   ++ SL V  G+WV Y+   YRG QY+L      G++  Y + G T A  G L+ 
Sbjct: 133 MGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLERDRHSGEFCTYGELG-TQAHTGQLQS 191

Query: 170 V 170
           +
Sbjct: 192 I 192



 Score = 46.6 bits (109), Expect = 1e-05
 Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNL--QPYLSR-CNSARVDSGCWMLYEQPNYSGLQYFLR 59
           ++TL+E   FQG  ++   D+P+L    + S+   S +V SG W+ Y+ P Y G QY L 
Sbjct: 107 RVTLFEGDNFQGCKFDLVDDYPSLPSMGWASKDVGSLKVSSGAWVAYQYPGYRGYQYVLE 166

Query: 60  R 60
           R
Sbjct: 167 R 167


>gi|62988361 absent in melanoma 1 [Homo sapiens]
          Length = 1723

 Score = 88.6 bits (218), Expect = 2e-18
 Identities = 58/190 (30%), Positives = 95/190 (50%), Gaps = 27/190 (14%)

Query: 3    KITLYEDRGFQGRHYE-----CS-------------SDHPNLQPYLSRCNSARVDSGCWM 44
            K+ +YE   F+G+  E     CS              DH    P+ S   S +V  G W+
Sbjct: 1219 KVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDH---LPFTS-VGSMKVLRGIWV 1274

Query: 45   LYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLI--PHSGSHRIRLYEREDY--RG 100
             YE+P ++G QY L  G+Y D + W G +  ++S R I    S +H I +Y  +++  +G
Sbjct: 1275 AYEKPGFTGHQYLLEEGEYRDWKAWGGYNGELQSLRPILGDFSNAHMI-MYSEKNFGSKG 1333

Query: 101  QMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGAT 160
              I+     + L++     +  S+NVL G WV YE  ++ G QY+L  G Y  ++DWG  
Sbjct: 1334 SSIDVLGIVANLKETGYGVKTQSINVLSGVWVAYENPDFTGEQYILDKGFYTSFEDWGGK 1393

Query: 161  NARVGSLRRV 170
            N ++ S++ +
Sbjct: 1394 NCKISSVQPI 1403



 Score = 85.1 bits (209), Expect = 3e-17
 Identities = 50/160 (31%), Positives = 78/160 (48%), Gaps = 20/160 (12%)

Query: 35   SARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLIPHSGSH------ 88
            S +V  G W++YE+P + G+ + L  G+Y D   W   +  + S R +   G        
Sbjct: 1158 SMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYIGSMRPLKMGGRKVEFPTD 1217

Query: 89   -RIRLYEREDYRGQMIEF-TEDCSCLQ-----------DRFRFNEIHSLNVLEGSWVLYE 135
             ++ +YE+  + G+ +E  T  CS +            D   F  + S+ VL G WV YE
Sbjct: 1218 PKVVVYEKPFFEGKCVELETGMCSFVMEGGETEEATGDDHLPFTSVGSMKVLRGIWVAYE 1277

Query: 136  LSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRVI-DFS 174
               + G QYLL  G+YR ++ WG  N  + SLR ++ DFS
Sbjct: 1278 KPGFTGHQYLLEEGEYRDWKAWGGYNGELQSLRPILGDFS 1317



 Score = 80.9 bits (198), Expect = 5e-16
 Identities = 55/169 (32%), Positives = 82/169 (48%), Gaps = 6/169 (3%)

Query: 3    KITLYEDRGFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGD 62
            +I L+ +  FQG           +    S   S RV  G W++Y+  N++G QY L  G 
Sbjct: 1416 QIHLFSEPQFQGHSQSFEETTSQIDDSFST-KSCRVSGGSWVVYDGENFTGNQYVLEEGH 1474

Query: 63   YADHQQWMGLSDSV--RSCRLIPHSGSH-RIRLYEREDYRGQMIEFTEDCSCLQDRFRFN 119
            Y      MG       +S R I    S   I L+ERED++G+ IE   +   L+      
Sbjct: 1475 YPCLSA-MGCPPGATFKSLRFIDVEFSEPTIILFEREDFKGKKIELNAETVNLRSLGFNT 1533

Query: 120  EIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLR 168
            +I S+ V+ G WV YE  +YRGRQ+LL P +   + ++     ++GSLR
Sbjct: 1534 QIRSVQVIGGIWVTYEYGSYRGRQFLLSPAEVPNWYEFSGCR-QIGSLR 1581



 Score = 62.8 bits (151), Expect = 1e-10
 Identities = 49/184 (26%), Positives = 81/184 (44%), Gaps = 19/184 (10%)

Query: 2    GKITLYEDRGFQGRHYECSSDHPNLQPY-LSRCNSARVDSGCWMLYEQPNYSGLQYFLRR 60
            GK+ +Y +     +  E  SD  +   + LS     +V  GCW+LYEQPN+ G    L  
Sbjct: 1022 GKVVIYSEPDVSEKCIEVFSDIQDCSSWSLSPVILIKVVRGCWILYEQPNFEGHSIPLEE 1081

Query: 61   GDYADHQQWMGLSDSVR--------------SCRLI--PHSGSHRIRLYEREDYRGQMIE 104
            G+      W G+ D +               S R +   +  SH I L+   +  G +  
Sbjct: 1082 GELELSGLW-GIEDILERHEEAESDKPVVIGSIRHVVQDYRVSH-IDLFTEPEGLGILSS 1139

Query: 105  FTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARV 164
            + +D   +Q      +  S+ V  G+W++YE   ++G  ++L PG+Y     W    A +
Sbjct: 1140 YFDDTEEMQGFGVMQKTCSMKVHWGTWLIYEEPGFQGVPFILEPGEYPDLSFWDTEAAYI 1199

Query: 165  GSLR 168
            GS+R
Sbjct: 1200 GSMR 1203


>gi|90403579 beta-gamma crystallin domain containing 3 [Homo
           sapiens]
          Length = 1022

 Score = 82.4 bits (202), Expect = 2e-16
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 8/176 (4%)

Query: 3   KITLYEDRGFQGRHYECSSDHPNLQPYLS------RCNSARVDSGCWMLYEQPNYSGLQY 56
           K+ +YE   F G+  E S    ++  +L       R  S RV  G W+ YE+ ++ G Q+
Sbjct: 532 KVIIYEKPHFHGQAKEFSEHIDSVPNFLKNNGDFHRIGSIRVIGGVWVAYEKEHFKGQQF 591

Query: 57  FLRRGDYADHQQWMGLSDSVRSCRLIPHSG-SHRIRLYEREDYRGQMIEFT-EDCSCLQD 114
            L  GD+ D      LS  + S R +  +     + L+E +   G+ I+ T ++ S L++
Sbjct: 592 LLEEGDFEDSNACGALSSPILSFRYLQANFIESSVTLFESDLESGKFIDITNQEISDLEE 651

Query: 115 RFRFNEIHSLNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNARVGSLRRV 170
               ++  S++V  G WV Y+   + G QY+L  G Y+ + DWG +N  + S+R +
Sbjct: 652 IGFGSKTRSIHVKSGVWVAYQQKFFCGEQYILEKGKYKCFFDWGGSNNIIMSIRPI 707



 Score = 62.8 bits (151), Expect = 1e-10
 Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 10/146 (6%)

Query: 31  SRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWMGLSDSVRSCRLIP------H 84
           S+  S  V SG W+ Y+Q  + G QY L +G Y     W G ++ + S R I       +
Sbjct: 656 SKTRSIHVKSGVWVAYQQKFFCGEQYILEKGKYKCFFDWGGSNNIIMSIRPIQLEPLGIN 715

Query: 85  SGSHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQY 144
              H ++ + +  ++G+ I+FTE+ S L          S  VL G W+LY   +      
Sbjct: 716 EPPHLLKAFSKPGFQGECIDFTEETSDLTSLMPC----SFKVLRGCWLLYYQEDMFVNHC 771

Query: 145 LLMPGDYRRYQDWGATNARVGSLRRV 170
           +L  G Y      G   ++V SL+ +
Sbjct: 772 VLEEGLYADLTSCGCPASKVKSLKPI 797



 Score = 53.1 bits (126), Expect = 1e-07
 Identities = 48/161 (29%), Positives = 73/161 (45%), Gaps = 8/161 (4%)

Query: 11  GFQGRHYECSSDHPNLQPYLSRCNSARVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWM 70
           GFQG   + + +  +L   L  C S +V  GCW+LY Q +       L  G YAD     
Sbjct: 728 GFQGECIDFTEETSDLTS-LMPC-SFKVLRGCWLLYYQEDMFVNHCVLEEGLYADLTSCG 785

Query: 71  GLSDSVRSCRLIPHSGSH-RIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEG 129
             +  V+S + I +      I L+  E   G+ +   E  + + ++       S+ V  G
Sbjct: 786 CPASKVKSLKPIDYVFEEPSISLFALEHCEGRELHLEEAVNSVLNKDLHFYTQSVWVKSG 845

Query: 130 SWVLYELSNYRGRQYLLMPGDYRRYQDWGATN--ARVGSLR 168
            W+ YE SN+ GRQ LL P +     +W A +    +GSLR
Sbjct: 846 LWIAYEGSNFLGRQILLRPNE---IPNWTAFSRWKTIGSLR 883



 Score = 38.1 bits (87), Expect = 0.004
 Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 7/55 (12%)

Query: 124 LNVLEGSWVLYELSNYRGRQYLLMPGDYRRYQDWGATNAR-------VGSLRRVI 171
           + V+ G W+LYE  ++RG++ +L  G+    +DW   N R       +GSL+RV+
Sbjct: 381 IKVVRGCWILYEKPHFRGQKCVLEEGEKVLNRDWILQNRRHPQRNFILGSLKRVL 435



 Score = 35.4 bits (80), Expect = 0.025
 Identities = 26/120 (21%), Positives = 53/120 (44%), Gaps = 13/120 (10%)

Query: 37  RVDSGCWMLYEQPNYSGLQYFLRRGDYADHQQWM----------GLSDSVRSCRLIPHSG 86
           +V  GCW+LYE+P++ G +  L  G+   ++ W+           +  S++  R++    
Sbjct: 382 KVVRGCWILYEKPHFRGQKCVLEEGEKVLNRDWILQNRRHPQRNFILGSLK--RVLKDCS 439

Query: 87  SHRIRLYEREDYRGQMIEFTEDCSCLQDRFRFNEIHSLNVLEGSWVLYELSNYRGRQYLL 146
              I L+ + D     +        L++    ++  S  V  G W+ Y   N++G+  +L
Sbjct: 440 IPEIELFPQSDPACCPVYIQRAVPNLEE-LNISKSVSFTVKSGVWLAYPDINFKGQATVL 498


>gi|164420681 methionyl aminopeptidase 1 [Homo sapiens]
          Length = 386

 Score = 28.9 bits (63), Expect = 2.3
 Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 7/47 (14%)

Query: 57  FLRRGDYADHQQWMGLSDSVRSCRLIPHSGSHRIRLYEREDYRGQMI 103
           +++R DYADH   +G+S+S ++ +     G+ +I+L   ED  G  +
Sbjct: 102 YIQRPDYADHP--LGMSESEQALK-----GTSQIKLLSSEDIEGMRL 141


>gi|42734438 hypothetical protein LOC51571 [Homo sapiens]
          Length = 324

 Score = 27.7 bits (60), Expect = 5.2
 Identities = 17/63 (26%), Positives = 34/63 (53%), Gaps = 7/63 (11%)

Query: 118 FNEIHSLNVLEGSWVLYELSNYRG-----RQYLLMPGDYRRYQD-WGATNARVGSLRRVI 171
           +N+++ + + +   +L +L +YRG     R+ +  P D +  +  WGA    VG L++  
Sbjct: 36  YNQVNVV-LKDAEGILEDLQSYRGAGHEIREAIQHPADEKLQEKAWGAVVPLVGKLKKFY 94

Query: 172 DFS 174
           +FS
Sbjct: 95  EFS 97


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.140    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,058,133
Number of Sequences: 37866
Number of extensions: 297713
Number of successful extensions: 573
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 459
Number of HSP's gapped (non-prelim): 44
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press