Search of human proteins with 5174539

Search of human proteins with 5174539

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|5174539 cytosolic malate dehydrogenase [Homo sapiens]
         (334 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|5174539 cytosolic malate dehydrogenase [Homo sapiens]              657   0.0  
gi|89886456 malate dehydrogenase 1B, NAD (soluble) [Homo sapiens]     136   3e-32
gi|4557032 L-lactate dehydrogenase B [Homo sapiens]                    55   1e-07
gi|221136809 lactate dehydrogenase A-like 6A [Homo sapiens]            48   1e-05
gi|47059044 lactate dehydrogenase A-like 6A [Homo sapiens]             48   1e-05
gi|5031857 L-lactate dehydrogenase A isoform 1 [Homo sapiens]          47   2e-05
gi|9257228 L-lactate dehydrogenase C [Homo sapiens]                    46   4e-05
gi|4504973 L-lactate dehydrogenase C [Homo sapiens]                    46   4e-05
gi|15082234 lactate dehydrogenase A-like 6B [Homo sapiens]             42   6e-04
gi|171906567 peripheral benzodiazepine receptor-associated prote...    30   3.9  
gi|171906559 peripheral benzodiazepine receptor-associated prote...    30   3.9  
gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens]         30   3.9  
gi|222080058 Smith-Magenis syndrome chromosome region, candidate...    28   8.8  
gi|22538488 Smith-Magenis syndrome chromosome region, candidate ...    28   8.8  
gi|9966809 kappa B-ras 1 [Homo sapiens]                                28   8.8  

>gi|5174539 cytosolic malate dehydrogenase [Homo sapiens]
          Length = 334

 Score =  657 bits (1695), Expect = 0.0
 Identities = 334/334 (100%), Positives = 334/334 (100%)

Query: 1   MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC 60
           MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC
Sbjct: 1   MSEPIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC 60

Query: 61  ALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYA 120
           ALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYA
Sbjct: 61  ALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYA 120

Query: 121 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKN 180
           KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKN
Sbjct: 121 KKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKN 180

Query: 181 VIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKL 240
           VIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKL
Sbjct: 181 VIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKL 240

Query: 241 SSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFV 300
           SSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFV
Sbjct: 241 SSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFV 300

Query: 301 EGLPINDFSREKMDLTAKELTEEKESAFEFLSSA 334
           EGLPINDFSREKMDLTAKELTEEKESAFEFLSSA
Sbjct: 301 EGLPINDFSREKMDLTAKELTEEKESAFEFLSSA 334


>gi|89886456 malate dehydrogenase 1B, NAD (soluble) [Homo sapiens]
          Length = 518

 Score =  136 bits (342), Expect = 3e-32
 Identities = 93/330 (28%), Positives = 159/330 (48%), Gaps = 15/330 (4%)

Query: 4   PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALP 63
           P++V +T A+    Y+L+  + +G VFG    I + L D       L  +++E QD A P
Sbjct: 131 PLQVWITSASAPACYNLIPILTSGEVFGMHTEISITLFDNKQAEEHLKSLVVETQDLASP 190

Query: 64  LLKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKS 123
           +L+ V    K + AF+   V +++     +E    +D L++ V + +  G  ++K A +S
Sbjct: 191 VLRSVSICTKVEEAFRQAHVIVVLDDSTNKEVFTLEDCLRSRVPLCRLYGYLIEKNAHES 250

Query: 124 VKVIVVGNP-ANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVI 182
           V+VIV G    N   +   + AP I   N   +       AKA +A KL    + +K+VI
Sbjct: 251 VRVIVGGRTFVNLKTVLLMRYAPRI-AHNIIAVALGVEGEAKAILARKLKTAPSYIKDVI 309

Query: 183 IWGNHSSTQYPDVNHAKVKLQGKEV--------GVYEALKDDSWLKGEFVTTVQQRGAAV 234
           IWGN S   Y D+   +V      +         V   + D  W+K EFV  ++     +
Sbjct: 310 IWGNISGNNYVDLRKTRVYRYESAIWGPLHYSRPVLNLIFDSEWVKREFVAILKN----L 365

Query: 235 IKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKN 294
               +    + AA +I   ++  + G+P GE VS+G++S+G  +G+P  +++S PV  +N
Sbjct: 366 TTTGRQFGGILAAHSIATTLKYWYHGSPPGEIVSLGILSEG-QFGIPKGIVFSMPVKFEN 424

Query: 295 KTWKFVEGLPINDFSREKMDLTAKELTEEK 324
            TW  +  L   + S + M     +L +EK
Sbjct: 425 GTWVVLTDLKDVEISEQIMTRMTSDLIQEK 454


>gi|4557032 L-lactate dehydrogenase B [Homo sapiens]
          Length = 334

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 67/271 (24%), Positives = 117/271 (43%), Gaps = 19/271 (7%)

Query: 28  SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEDVAFKDLDVAILV 87
           S+ GK     L L+D+  +   L G +M+LQ  +L L    I  DK+     +  + ++ 
Sbjct: 39  SILGKSLADELALVDV--LEDKLKGEMMDLQHGSLFLQTPKIVADKDYSVTANSKIVVVT 96

Query: 88  GSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSI 147
             + ++EG  R +L++ NV +FK     + KY+   + +IVV NP +       K +  +
Sbjct: 97  AGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCI-IIVVSNPVDILTYVTWKLS-GL 154

Query: 148 PKEN-FSCLTRLDHNRAKAQIALKLGVTANDVKNVII--WGNHSSTQYPDVNHAKVKLQG 204
           PK         LD  R +  +A KLG+  +     I+   G+ S   +  VN A V LQ 
Sbjct: 155 PKHRVIGSGCNLDSARFRYLMAEKLGIHPSSCHGWILGEHGDSSVAVWSGVNVAGVSLQ- 213

Query: 205 KEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSS---AMSAAKAICDHVRDIWFGT 261
            E+       +DS    E    V +    VIK +  ++    +S A  I   ++++    
Sbjct: 214 -ELNPEMGTDNDSENWKEVHKMVVESAYEVIKLKGYTNWAIGLSVADLIESMLKNLSRIH 272

Query: 262 PEGEFVSMGVISDGNSYGVPDDLLYSFPVVI 292
           P    V          YG+ +++  S P ++
Sbjct: 273 PVSTMVK-------GMYGIENEVFLSLPCIL 296


>gi|221136809 lactate dehydrogenase A-like 6A [Homo sapiens]
          Length = 332

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 13/258 (5%)

Query: 38  LVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGME 97
           LVL+D+    G L G  M+LQ  +  +    I + K+ +   + ++ I+     +++G  
Sbjct: 48  LVLVDVDE--GKLKGETMDLQHGSPFMKMPNIVSSKDYLVTANSNLVIITAGARQKKGET 105

Query: 98  RKDLLKANVKIFKSQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTR 157
           R DL++ NV IFK     + +Y+    K+++V NP +     A K +             
Sbjct: 106 RLDLVQRNVSIFKLMIPNITQYS-PHCKLLIVTNPVDILTYVAWKLSGFPKNRVIGSGCN 164

Query: 158 LDHNRAKAQIALKLGVTANDVKNVIIWGNHSSTQYP---DVNHAKVKLQGKEVGVYEALK 214
           LD  R +  I  +LG+ +     +I+ G H  +  P    VN A V L+     +     
Sbjct: 165 LDSARFRYFIGQRLGIHSESCHGLIL-GEHGDSSVPVWSGVNIAGVPLKDLNPDIGTDKD 223

Query: 215 DDSWLKGEFVTTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISD 274
            + W        V   G  ++K +  +S    + ++ D    I         VS   +S 
Sbjct: 224 PEQW--ENVHKKVISSGYEMVKMKGYTS-WGISLSVADLTESILKNLRRVHPVS--TLSK 278

Query: 275 GNSYGVPDDLLYSFPVVI 292
           G  YG+ +D+  S P ++
Sbjct: 279 G-LYGINEDIFLSVPCIL 295


>gi|47059044 lactate dehydrogenase A-like 6A [Homo sapiens]
          Length = 332

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 60/258 (23%), Positives = 108/258 (41%), Gaps = 13/258 (5%)

Query: 38  LVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEDVAFKDLDVAILVGSMPRREGME 97
           LVL+D+    G L G  M+LQ  +  +    I + K+ +   + ++ I+     +++G  
Sbjct: 48  LVLVDVDE--GKLKGETMDLQHGSPFMKMPNIVSSKDYLVTANSNLVIITAGARQKKGET 105

Query: 98  RKDLLKANVKIFKSQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSIPKENFSCLTR 157
           R DL++ NV IFK     + +Y+    K+++V NP +     A K +             
Sbjct: 106 RLDLVQRNVSIFKLMIPNITQYS-PHCKLLIVTNPVDILTYVAWKLSGFPKNRVIGSGCN 164

Query: 158 LDHNRAKAQIALKLGVTANDVKNVIIWGNHSSTQYP---DVNHAKVKLQGKEVGVYEALK 214
           LD  R +  I  +LG+ +     +I+ G H  +  P    VN A V L+     +     
Sbjct: 165 LDSARFRYFIGQRLGIHSESCHGLIL-GEHGDSSVPVWSGVNIAGVPLKDLNPDIGTDKD 223

Query: 215 DDSWLKGEFVTTVQQRGAAVIKARKLSSAMSAAKAICDHVRDIWFGTPEGEFVSMGVISD 274
            + W        V   G  ++K +  +S    + ++ D    I         VS   +S 
Sbjct: 224 PEQW--ENVHKKVISSGYEMVKMKGYTS-WGISLSVADLTESILKNLRRVHPVS--TLSK 278

Query: 275 GNSYGVPDDLLYSFPVVI 292
           G  YG+ +D+  S P ++
Sbjct: 279 G-LYGINEDIFLSVPCIL 295


>gi|5031857 L-lactate dehydrogenase A isoform 1 [Homo sapiens]
          Length = 332

 Score = 47.0 bits (110), Expect = 2e-05
 Identities = 60/258 (23%), Positives = 105/258 (40%), Gaps = 26/258 (10%)

Query: 28  SVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPLLKDVIATDKEDVAFKDLDVAILV 87
           S+  KD    L L+D+  +   L G +M+LQ  +L L    I + K+     +  + I+ 
Sbjct: 38  SILMKDLADELALVDV--IEDKLKGEMMDLQHGSLFLRTPKIVSGKDYNVTANSKLVIIT 95

Query: 88  GSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKSVKVIVVGNPANTNCLTASKSAPSI 147
               ++EG  R +L++ NV IFK     + KY+  + K+++V NP +     A K +   
Sbjct: 96  AGARQQEGESRLNLVQRNVNIFKFIIPNVVKYS-PNCKLLIVSNPVDILTYVAWKISGFP 154

Query: 148 PKENFSCLTRLDHNRAKAQIALKLGV----------TANDVKNVIIW------GNHSSTQ 191
                     LD  R +  +  +LGV            +   +V +W      G    T 
Sbjct: 155 KNRVIGSGCNLDSARFRYLMGERLGVHPLSCHGWVLGEHGDSSVPVWSGMNVAGVSLKTL 214

Query: 192 YPDVNHAKVKLQGKEV------GVYEALKDDSWLKGEFVTTVQQRGAAVIK-ARKLSSAM 244
           +PD+   K K Q KEV        YE +K   +       +V     +++K  R++    
Sbjct: 215 HPDLGTDKDKEQWKEVHKQVVESAYEVIKLKGYTSWAIGLSVADLAESIMKNLRRVHPVS 274

Query: 245 SAAKAICDHVRDIWFGTP 262
           +  K +     D++   P
Sbjct: 275 TMIKGLYGIKDDVFLSVP 292


>gi|9257228 L-lactate dehydrogenase C [Homo sapiens]
          Length = 332

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 73/291 (25%), Positives = 113/291 (38%), Gaps = 21/291 (7%)

Query: 5   IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL 64
           I ++ TGA G             S+  KD    L L+D+   +  L G +M+LQ  +L  
Sbjct: 23  ITIVGTGAVGMACAI--------SILLKDLADELALVDVA--LDKLKGEMMDLQHGSLFF 72

Query: 65  LKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKSV 124
               I + K+     +  + I+     ++EG  R  L++ NV I KS   A+  Y+    
Sbjct: 73  STSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYS-PDC 131

Query: 125 KVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIW 184
           K++VV NP +       K +             LD  R +  I  KLGV        II 
Sbjct: 132 KILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWII- 190

Query: 185 GNHSSTQYP---DVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLS 241
           G H  +  P    VN A V L+  +  +      + W        V Q    +IK +  +
Sbjct: 191 GEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHW--KNIHKQVIQSAYEIIKLKGYT 248

Query: 242 SAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVI 292
           S  +   ++ D V  I         VS  V      YG+ ++L  S P V+
Sbjct: 249 S-WAIGLSVMDLVGSILKNLRRVHPVSTMV---KGLYGIKEELFLSIPCVL 295


>gi|4504973 L-lactate dehydrogenase C [Homo sapiens]
          Length = 332

 Score = 46.2 bits (108), Expect = 4e-05
 Identities = 73/291 (25%), Positives = 113/291 (38%), Gaps = 21/291 (7%)

Query: 5   IRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDCALPL 64
           I ++ TGA G             S+  KD    L L+D+   +  L G +M+LQ  +L  
Sbjct: 23  ITIVGTGAVGMACAI--------SILLKDLADELALVDVA--LDKLKGEMMDLQHGSLFF 72

Query: 65  LKDVIATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKSV 124
               I + K+     +  + I+     ++EG  R  L++ NV I KS   A+  Y+    
Sbjct: 73  STSKITSGKDYSVSANSRIVIVTAGARQQEGETRLALVQRNVAIMKSIIPAIVHYS-PDC 131

Query: 125 KVIVVGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIW 184
           K++VV NP +       K +             LD  R +  I  KLGV        II 
Sbjct: 132 KILVVSNPVDILTYIVWKISGLPVTRVIGSGCNLDSARFRYLIGEKLGVHPTSCHGWII- 190

Query: 185 GNHSSTQYP---DVNHAKVKLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLS 241
           G H  +  P    VN A V L+  +  +      + W        V Q    +IK +  +
Sbjct: 191 GEHGDSSVPLWSGVNVAGVALKTLDPKLGTDSDKEHW--KNIHKQVIQSAYEIIKLKGYT 248

Query: 242 SAMSAAKAICDHVRDIWFGTPEGEFVSMGVISDGNSYGVPDDLLYSFPVVI 292
           S  +   ++ D V  I         VS  V      YG+ ++L  S P V+
Sbjct: 249 S-WAIGLSVMDLVGSILKNLRRVHPVSTMV---KGLYGIKEELFLSIPCVL 295


>gi|15082234 lactate dehydrogenase A-like 6B [Homo sapiens]
          Length = 381

 Score = 42.4 bits (98), Expect = 6e-04
 Identities = 49/198 (24%), Positives = 86/198 (43%), Gaps = 13/198 (6%)

Query: 16  IAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLD-------GVLMELQDCALPLLKDV 68
           + +S +  IG GSV G    I ++L  ++  + ++D       G  M+LQ  +       
Sbjct: 67  VHHSKVSIIGTGSV-GMACAISILLKGLSDELALVDLDEDKLKGETMDLQHGSPFTKMPN 125

Query: 69  IATDKEDVAFKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKSVKVIV 128
           I   K+     + ++ I+     + +G  R +L++ NV IFK   +++ +Y+    K+I+
Sbjct: 126 IVCSKDYFVTANSNLVIITAGARQEKGETRLNLVQRNVAIFKLMISSIVQYS-PHCKLII 184

Query: 129 VGNPANTNCLTASKSAPSIPKENFSCLTRLDHNRAKAQIALKLGVTANDVKNVIIWGNHS 188
           V NP +     A K +             LD  R +  I  KLG+ +      I+ G H 
Sbjct: 185 VSNPVDILTYVAWKLSAFPKNRIIGSGCNLDTARFRFLIGQKLGIHSESCHGWIL-GEHG 243

Query: 189 STQYP---DVNHAKVKLQ 203
            +  P    VN A V L+
Sbjct: 244 DSSVPVWSGVNIAGVPLK 261


>gi|171906567 peripheral benzodiazepine receptor-associated protein
           1 isoform b [Homo sapiens]
          Length = 1797

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 12/57 (21%), Positives = 33/57 (57%)

Query: 201 KLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSSAMSAAKAICDHVRDI 257
           +L G+     +   +++ L+G+ +   Q+R +A+ K++ L S + + + +  H+R++
Sbjct: 328 RLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREV 384


>gi|171906559 peripheral benzodiazepine receptor-associated protein
           1 isoform a [Homo sapiens]
          Length = 1857

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 12/57 (21%), Positives = 33/57 (57%)

Query: 201 KLQGKEVGVYEALKDDSWLKGEFVTTVQQRGAAVIKARKLSSAMSAAKAICDHVRDI 257
           +L G+     +   +++ L+G+ +   Q+R +A+ K++ L S + + + +  H+R++
Sbjct: 388 RLSGRATEKEQVEWENAELRGQLLGVTQERDSALRKSQGLQSKLESLEQVLKHMREV 444


>gi|51988887 SH3 domain containing ring finger 1 [Homo sapiens]
          Length = 888

 Score = 29.6 bits (65), Expect = 3.9
 Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 4/66 (6%)

Query: 166 QIALKLGVTANDVKNVIIWGNHSSTQYPDVNHAKVKLQGKEVGVYEALKDDSWLKGEFVT 225
           Q    LG   N+ + V+   +     YP  + A+++L+  ++      ++D W KG    
Sbjct: 814 QACSSLGPVLNESRPVVCERHRVVVSYPPQSEAELELKEGDIVFVHKKREDGWFKG---- 869

Query: 226 TVQQRG 231
           T+Q+ G
Sbjct: 870 TLQRNG 875


>gi|222080058 Smith-Magenis syndrome chromosome region, candidate 7
           isoform 2 [Homo sapiens]
          Length = 465

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 262 PEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGL 303
           P G FV  G + DG   G  D +    P+V++   W  V G+
Sbjct: 183 PFGAFVPGGPLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGV 224


>gi|22538488 Smith-Magenis syndrome chromosome region, candidate 7
           isoform 1 [Homo sapiens]
          Length = 454

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 262 PEGEFVSMGVISDGNSYGVPDDLLYSFPVVIKNKTWKFVEGL 303
           P G FV  G + DG   G  D +    P+V++   W  V G+
Sbjct: 172 PFGAFVPGGPLYDGLQAGAADHVRLLVPLVLEPGLWSLVPGV 213


>gi|9966809 kappa B-ras 1 [Homo sapiens]
          Length = 192

 Score = 28.5 bits (62), Expect = 8.8
 Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 9/54 (16%)

Query: 78  FKDLDVAILVGSMPRREGMERKDLLKANVKIFKSQGAALDKYAKKSVKVIVVGN 131
           F   D  +LV S+   E  +R +LLK  +  FK          KK V ++V+GN
Sbjct: 76  FSFADGFVLVYSVNNLESFQRVELLKKEIDKFKD---------KKEVAIVVLGN 120


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.382 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,420,390
Number of Sequences: 37866
Number of extensions: 468663
Number of successful extensions: 1070
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1053
Number of HSP's gapped (non-prelim): 16
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.