Guide to the Human Genome
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Name: PLAG1 Sequence: fasta or formatted (418aa) NCBI GI: 167857798
Description:

pleiomorphic adenoma gene 1 isoform b

Referenced in:

Lacrimal and Salivary Glands
Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [500aa] pleiomorphic adenoma gene 1 isoform a
alt prot [500aa] pleiomorphic adenoma gene 1 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             3.8         16           2
 C cysteine            2.9         12           1
 D aspartate           5.0         21           2
 E glutamate           4.8         20           2
 F phenylalanine       4.5         19           1
 G glycine             5.5         23           2
 H histidine           6.0         25           2
 I isoleucine          2.6         11           1
 K lysine              7.2         30           2
 L leucine            11.2         47           2
 M methionine          2.6         11           1
 N asparagine          3.6         15           1
 P proline             6.5         27           2
 Q glutamine           5.3         22           1
 R arginine            2.9         12           2
 S serine             12.7         53           4
 T threonine           6.9         29           2
 V valine              3.6         15           2
 W tryptophan          0.0          0           0
 Y tyrosine            2.4         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pleiomorphic adenoma gene 1 isoform b 
PLAG1                 1.000   pleiomorphic adenoma gene 1 isoform a 
PLAG1                 1.000   pleiomorphic adenoma gene 1 isoform a 
PLAGL2                0.511   pleiomorphic adenoma gene-like 2 
PLAGL1                0.327   pleiomorphic adenoma gene-like 1 isoform 1 
PLAGL1                0.327   pleiomorphic adenoma gene-like 1 isoform 1 
PLAGL1                0.327   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.327   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.327   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.327   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.327   pleiomorphic adenoma gene-like 1 isoform 2 
PLAGL1                0.327   pleiomorphic adenoma gene-like 1 isoform 1 
ZNF510                0.098   zinc finger protein 510 
ZNF845                0.098   zinc finger protein 845 
ZNF761                0.096   zinc finger protein 761 
ZNF28                 0.096   zinc finger protein 28 
ZNF429                0.095   zinc finger protein 429 
ZNF98                 0.095   zinc finger protein 98 
ZNF347                0.095   zinc finger protein 347 
ZNF436                0.093   zinc finger protein 436 
ZNF436                0.093   zinc finger protein 436 
ZBTB17                0.093   zinc finger and BTB domain containing 17 
ZNF184                0.093   zinc finger protein 184 
ZNF121                0.092   zinc finger protein 121 
ZNF492                0.092   zinc finger protein 492 
ZNF610                0.092   zinc finger protein 610 isoform b 
ZNF610                0.092   zinc finger protein 610 isoform a 
ZNF610                0.092   zinc finger protein 610 isoform a 
ZNF610                0.092   zinc finger protein 610 isoform a 
ZNF519                0.092   zinc finger protein 519 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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