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Search of human proteins with 50312659
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|50312659 heat shock transcription factor, Y linked 2 isoform
2 [Homo sapiens]
(203 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|24211017 heat shock transcription factor, Y-linked 1 isoform ... 407 e-114
gi|50312659 heat shock transcription factor, Y linked 2 isoform ... 407 e-114
gi|50312655 heat shock transcription factor, Y-linked 1 isoform ... 345 2e-95
gi|32526913 heat shock transcription factor, Y linked 2 isoform ... 345 2e-95
gi|169216697 PREDICTED: heat shock transcription factor family, ... 113 1e-25
gi|7706603 heat shock transcription factor family, X linked 1 [H... 113 1e-25
gi|239752444 PREDICTED: similar to heat shock transcription fact... 99 3e-21
gi|239746964 PREDICTED: similar to heat shock transcription fact... 99 3e-21
gi|122937277 heat shock transcription factor family member 5 [Ho... 68 6e-12
gi|207113147 heat shock transcription factor 2 isoform b [Homo s... 51 6e-07
gi|4758568 heat shock transcription factor 2 isoform a [Homo sap... 51 6e-07
gi|5031767 heat shock transcription factor 1 [Homo sapiens] 42 4e-04
gi|100913209 heat shock transcription factor 4 isoform b [Homo s... 42 5e-04
gi|100913211 heat shock transcription factor 4 isoform a [Homo s... 42 5e-04
gi|117500790 FERM domain containing 3 [Homo sapiens] 28 7.0
gi|4757798 APG5 autophagy 5-like [Homo sapiens] 27 9.1
gi|120444924 ATP/GTP binding protein-like 1 [Homo sapiens] 27 9.1
gi|153945728 microtubule-associated protein 1B [Homo sapiens] 27 9.1
>gi|24211017 heat shock transcription factor, Y-linked 1 isoform 2
[Homo sapiens]
Length = 203
Score = 407 bits (1046), Expect = e-114
Identities = 203/203 (100%), Positives = 203/203 (100%)
Query: 1 MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP 60
MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP
Sbjct: 1 MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP 60
Query: 61 SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK 120
SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK
Sbjct: 61 SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK 120
Query: 121 APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKIRFTKMKLS 180
APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKIRFTKMKLS
Sbjct: 121 APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKIRFTKMKLS 180
Query: 181 RSSTYENRYLCCNLHLKDESNYS 203
RSSTYENRYLCCNLHLKDESNYS
Sbjct: 181 RSSTYENRYLCCNLHLKDESNYS 203
>gi|50312659 heat shock transcription factor, Y linked 2 isoform 2
[Homo sapiens]
Length = 203
Score = 407 bits (1046), Expect = e-114
Identities = 203/203 (100%), Positives = 203/203 (100%)
Query: 1 MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP 60
MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP
Sbjct: 1 MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP 60
Query: 61 SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK 120
SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK
Sbjct: 61 SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK 120
Query: 121 APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKIRFTKMKLS 180
APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKIRFTKMKLS
Sbjct: 121 APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKIRFTKMKLS 180
Query: 181 RSSTYENRYLCCNLHLKDESNYS 203
RSSTYENRYLCCNLHLKDESNYS
Sbjct: 181 RSSTYENRYLCCNLHLKDESNYS 203
>gi|50312655 heat shock transcription factor, Y-linked 1 isoform 1
[Homo sapiens]
Length = 401
Score = 345 bits (884), Expect = 2e-95
Identities = 172/174 (98%), Positives = 174/174 (100%)
Query: 1 MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP 60
MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP
Sbjct: 1 MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP 60
Query: 61 SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK 120
SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK
Sbjct: 61 SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK 120
Query: 121 APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKIRF 174
APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSK++F
Sbjct: 121 APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKF 174
>gi|32526913 heat shock transcription factor, Y linked 2 isoform 1
[Homo sapiens]
Length = 401
Score = 345 bits (884), Expect = 2e-95
Identities = 172/174 (98%), Positives = 174/174 (100%)
Query: 1 MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP 60
MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP
Sbjct: 1 MAHVSSETQDVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESP 60
Query: 61 SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK 120
SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK
Sbjct: 61 SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETK 120
Query: 121 APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKIRF 174
APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSK++F
Sbjct: 121 APYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSAFLATFLSEEKESSVLSKLKF 174
>gi|169216697 PREDICTED: heat shock transcription factor family, X
linked 2 [Homo sapiens]
Length = 423
Score = 113 bits (282), Expect = 1e-25
Identities = 62/140 (44%), Positives = 90/140 (64%), Gaps = 3/140 (2%)
Query: 35 GDSDLRSMIEEHAFQVLSQGSLLESPSYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFK 94
G +LR + EE AFQ L++ + P V P +D+ LSL FP+KLW++V S+QF
Sbjct: 55 GSPNLRLLTEEIAFQPLAEEASFRRPHPDGDVP-PQGEDNLLSLPFPQKLWRLVSSNQFS 113
Query: 95 SISWDENGTCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSA 154
SI WD++G C VIN++LF+KEIL+ +++F T +IKSF RQLNLYGF K +Q R+
Sbjct: 114 SIWWDDSGACRVINQKLFEKEILKRDVAHKVFATTSIKSFFRQLNLYGFRKRRQCTFRT- 172
Query: 155 FLATFLSEEKESSVLSKIRF 174
S ++ S+L+K+ F
Sbjct: 173 -FTRIFSAKRLVSILNKLEF 191
>gi|7706603 heat shock transcription factor family, X linked 1 [Homo
sapiens]
Length = 423
Score = 113 bits (282), Expect = 1e-25
Identities = 62/140 (44%), Positives = 90/140 (64%), Gaps = 3/140 (2%)
Query: 35 GDSDLRSMIEEHAFQVLSQGSLLESPSYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFK 94
G +LR + EE AFQ L++ + P V P +D+ LSL FP+KLW++V S+QF
Sbjct: 55 GSPNLRLLTEEIAFQPLAEEASFRRPHPDGDVP-PQGEDNLLSLPFPQKLWRLVSSNQFS 113
Query: 95 SISWDENGTCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQLNLYGFSKIQQNFQRSA 154
SI WD++G C VIN++LF+KEIL+ +++F T +IKSF RQLNLYGF K +Q R+
Sbjct: 114 SIWWDDSGACRVINQKLFEKEILKRDVAHKVFATTSIKSFFRQLNLYGFRKRRQCTFRT- 172
Query: 155 FLATFLSEEKESSVLSKIRF 174
S ++ S+L+K+ F
Sbjct: 173 -FTRIFSAKRLVSILNKLEF 191
>gi|239752444 PREDICTED: similar to heat shock transcription factor
family, X linked 1 [Homo sapiens]
Length = 354
Score = 98.6 bits (244), Expect = 3e-21
Identities = 49/112 (43%), Positives = 74/112 (66%), Gaps = 4/112 (3%)
Query: 38 DLRSMIEEHAFQVLSQ--GSLLESP--SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQF 93
D +++ H Q +SQ GS SP V + + + L+FPRKLW IVE D F
Sbjct: 37 DSSEVLDRHEDQAMSQDPGSQDNSPPEDRNQRVVNVEDNHNLFRLSFPRKLWTIVEEDTF 96
Query: 94 KSISWDENGTCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQLNLYGFSK 145
KS+SW+++G ++I+++LF++E+L+ K RIF+TD++ SF+RQLNLYGF K
Sbjct: 97 KSVSWNDDGDAVIIDKDLFQREVLQRKGAERIFKTDSLTSFIRQLNLYGFCK 148
>gi|239746964 PREDICTED: similar to heat shock transcription factor
family, X linked 1 [Homo sapiens]
Length = 333
Score = 98.6 bits (244), Expect = 3e-21
Identities = 49/112 (43%), Positives = 74/112 (66%), Gaps = 4/112 (3%)
Query: 38 DLRSMIEEHAFQVLSQ--GSLLESP--SYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQF 93
D +++ H Q +SQ GS SP V + + + L+FPRKLW IVE D F
Sbjct: 37 DSSEVLDRHEDQAMSQDPGSQDNSPPEDRNQRVVNVEDNHNLFRLSFPRKLWTIVEEDTF 96
Query: 94 KSISWDENGTCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQLNLYGFSK 145
KS+SW+++G ++I+++LF++E+L+ K RIF+TD++ SF+RQLNLYGF K
Sbjct: 97 KSVSWNDDGDAVIIDKDLFQREVLQRKGAERIFKTDSLTSFIRQLNLYGFCK 148
>gi|122937277 heat shock transcription factor family member 5 [Homo
sapiens]
Length = 596
Score = 67.8 bits (164), Expect = 6e-12
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 12/80 (15%)
Query: 79 NFPRKLWKIVESDQFKSISWDENGTCIVINEELFKKEILETKAP------------YRIF 126
NFP KLW++V S +++SI WD G ++I++ LF+ E+L P +F
Sbjct: 13 NFPAKLWRLVNSPRYRSIRWDGRGEGLLIDQPLFEAELLSPPGPGGGGGTAGAGAEPELF 72
Query: 127 QTDAIKSFVRQLNLYGFSKI 146
+T + SF+RQLNLYGF K+
Sbjct: 73 KTTSFTSFIRQLNLYGFRKV 92
>gi|207113147 heat shock transcription factor 2 isoform b [Homo
sapiens]
Length = 518
Score = 51.2 bits (121), Expect = 6e-07
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 80 FPRKLWKIVESDQFKS-ISWDENG-TCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQ 137
F KLW +VE I+W +NG + +V++E+ F KEIL + F+ + + SFVRQ
Sbjct: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP-----KYFKHNNMASFVRQ 64
Query: 138 LNLYGFSKI 146
LN+YGF K+
Sbjct: 65 LNMYGFRKV 73
>gi|4758568 heat shock transcription factor 2 isoform a [Homo
sapiens]
Length = 536
Score = 51.2 bits (121), Expect = 6e-07
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 7/69 (10%)
Query: 80 FPRKLWKIVESDQFKS-ISWDENG-TCIVINEELFKKEILETKAPYRIFQTDAIKSFVRQ 137
F KLW +VE I+W +NG + +V++E+ F KEIL + F+ + + SFVRQ
Sbjct: 10 FLSKLWTLVEETHTNEFITWSQNGQSFLVLDEQRFAKEILP-----KYFKHNNMASFVRQ 64
Query: 138 LNLYGFSKI 146
LN+YGF K+
Sbjct: 65 LNMYGFRKV 73
>gi|5031767 heat shock transcription factor 1 [Homo sapiens]
Length = 529
Score = 42.0 bits (97), Expect = 4e-04
Identities = 26/69 (37%), Positives = 38/69 (55%), Gaps = 7/69 (10%)
Query: 80 FPRKLWKIV-ESDQFKSISWDENGTCI-VINEELFKKEILETKAPYRIFQTDAIKSFVRQ 137
F KLW +V + D I W +G V ++ F KE+L + F+ + + SFVRQ
Sbjct: 18 FLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLP-----KYFKHNNMASFVRQ 72
Query: 138 LNLYGFSKI 146
LN+YGF K+
Sbjct: 73 LNMYGFRKV 81
>gi|100913209 heat shock transcription factor 4 isoform b [Homo
sapiens]
Length = 492
Score = 41.6 bits (96), Expect = 5e-04
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 80 FPRKLWKIV-ESDQFKSISWDENGTCIVINEEL-FKKEILETKAPYRIFQTDAIKSFVRQ 137
F KLW +V + I W +GT +++++ F KE+L + F+ + SFVRQ
Sbjct: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP-----QYFKHSNMASFVRQ 74
Query: 138 LNLYGFSKI 146
LN+YGF K+
Sbjct: 75 LNMYGFRKV 83
>gi|100913211 heat shock transcription factor 4 isoform a [Homo
sapiens]
Length = 462
Score = 41.6 bits (96), Expect = 5e-04
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 80 FPRKLWKIV-ESDQFKSISWDENGTCIVINEEL-FKKEILETKAPYRIFQTDAIKSFVRQ 137
F KLW +V + I W +GT +++++ F KE+L + F+ + SFVRQ
Sbjct: 20 FLGKLWALVGDPGTDHLIRWSPSGTSFLVSDQSRFAKEVLP-----QYFKHSNMASFVRQ 74
Query: 138 LNLYGFSKI 146
LN+YGF K+
Sbjct: 75 LNMYGFRKV 83
>gi|117500790 FERM domain containing 3 [Homo sapiens]
Length = 597
Score = 27.7 bits (60), Expect = 7.0
Identities = 26/103 (25%), Positives = 49/103 (47%), Gaps = 8/103 (7%)
Query: 13 PKDELTASEASTRSPLC---EHTFPGDSDLRSMIEEHAFQVLSQGSLLESPSYTVCVSEP 69
PK+E ++ + SP+ E+ P + + EE L+ L+ +PS ++ +
Sbjct: 403 PKEENISAPLISSSPVKAAREYEDPPSEEEDKIKEEP----LTISELVYNPSASLLPTPV 458
Query: 70 DKDDDFLSLNFPRKL-WKIVESDQFKSISWDENGTCIVINEEL 111
D D+ + + P +L + ++D F+ + DEN I EEL
Sbjct: 459 DDDEIDMLFDCPSRLELEREDTDSFEDLEADENAFLIAEEEEL 501
>gi|4757798 APG5 autophagy 5-like [Homo sapiens]
Length = 275
Score = 27.3 bits (59), Expect = 9.1
Identities = 24/102 (23%), Positives = 44/102 (43%), Gaps = 20/102 (19%)
Query: 40 RSMIEEHAFQVLSQGSLLESPSYTVCVSEPDKDDDFLSLNFPRKLWKIVESDQFKSISWD 99
+ IE H + + L+ S + +E K D ++LW +++D+F W
Sbjct: 118 KDAIEAHFMSCMKEADALKHKSQVI--NEMQKKDH-------KQLWMGLQNDRFDQF-W- 166
Query: 100 ENGTCIVINEELFKKEILETK---APYRIFQTDAIKSFVRQL 138
IN +L + E P+RI+QT + F+++L
Sbjct: 167 ------AINRKLMEYPAEENGFRYIPFRIYQTTTERPFIQKL 202
>gi|120444924 ATP/GTP binding protein-like 1 [Homo sapiens]
Length = 1066
Score = 27.3 bits (59), Expect = 9.1
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 158 TFLSEEKESSVLSKIRFTKMKLSRSSTYENRYLCCN 193
+FL E+ +S + + +M +SRS T E+ Y CN
Sbjct: 912 SFLVEKSRASTARVVVWREMGVSRSYTMESSYCGCN 947
>gi|153945728 microtubule-associated protein 1B [Homo sapiens]
Length = 2468
Score = 27.3 bits (59), Expect = 9.1
Identities = 21/93 (22%), Positives = 43/93 (46%), Gaps = 5/93 (5%)
Query: 10 DVSPKDELTASEASTRSPLCEHTFPGDSDLRSMIEEHAFQVLSQGSLLESPSYTVCVSEP 69
D SP D +S + P+ E ++ D+DL +I + S +PS ++ P
Sbjct: 1688 DYSPSDMQDSSLSHKIPPMEEPSYTQDNDLSELISVSQVEASPSTSSAHTPSQ---IASP 1744
Query: 70 DKDDDFLSLNFPR--KLWKIVESDQFKSISWDE 100
++D + PR L+ + S++ +S+ ++
Sbjct: 1745 LQEDTLSDVAPPRDMSLYASLTSEKVQSLEGEK 1777
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.368
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,285,004
Number of Sequences: 37866
Number of extensions: 297749
Number of successful extensions: 721
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 704
Number of HSP's gapped (non-prelim): 19
length of query: 203
length of database: 18,247,518
effective HSP length: 97
effective length of query: 106
effective length of database: 14,574,516
effective search space: 1544898696
effective search space used: 1544898696
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.