Search of human proteins with 50263048

Search of human proteins with 50263048

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|50263048 glycoprotein M6B isoform 1 [Homo sapiens]
         (328 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|50263048 glycoprotein M6B isoform 1 [Homo sapiens]                 676   0.0  
gi|50263050 glycoprotein M6B isoform 2 [Homo sapiens]                 592   e-169
gi|24307895 glycoprotein M6B isoform 3 [Homo sapiens]                 485   e-137
gi|50263053 glycoprotein M6B isoform 4 [Homo sapiens]                 467   e-132
gi|42476105 glycoprotein M6A isoform 3 [Homo sapiens]                 315   3e-86
gi|42476108 glycoprotein M6A isoform 2 [Homo sapiens]                 315   3e-86
gi|14149619 glycoprotein M6A isoform 1 [Homo sapiens]                 315   3e-86
gi|41349501 proteolipid protein 1 isoform 2 [Homo sapiens]            281   7e-76
gi|41349499 proteolipid protein 1 isoform 1 [Homo sapiens]            263   2e-70
gi|192449447 proteolipid protein 1 isoform 1 [Homo sapiens]           263   2e-70
gi|52317100 olfactory receptor, family 5, subfamily A, member 1 ...    33   0.27 
gi|118442843 olfactory receptor, family 2, subfamily C, member 1...    30   2.3  
gi|37675280 ajuba isoform 2 [Homo sapiens]                             30   2.9  
gi|14249622 ajuba isoform 1 [Homo sapiens]                             30   2.9  
gi|111378393 sodium channel, voltage-gated, type VII, alpha [Hom...    29   5.0  
gi|222144233 fibroblast growth factor receptor 2 isoform 4 precu...    29   6.6  
gi|7657683 solute carrier family 7, (cationic amino acid transpo...    29   6.6  
gi|7657307 LIM domains containing 1 [Homo sapiens]                     29   6.6  
gi|4758284 ephrin receptor EphB1 precursor [Homo sapiens]              28   8.6  

>gi|50263048 glycoprotein M6B isoform 1 [Homo sapiens]
          Length = 328

 Score =  676 bits (1744), Expect = 0.0
 Identities = 328/328 (100%), Positives = 328/328 (100%)

Query: 1   MKPAMETAAEENTEQSQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSP 60
           MKPAMETAAEENTEQSQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSP
Sbjct: 1   MKPAMETAAEENTEQSQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSP 60

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120
           GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL
Sbjct: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120

Query: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 180
           SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT
Sbjct: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 180

Query: 181 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 240
           YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF
Sbjct: 181 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 240

Query: 241 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQ 300
           PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQ
Sbjct: 241 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASKMQ 300

Query: 301 AYQDIKAKEEQELQDIQSRSKEQLNSYT 328
           AYQDIKAKEEQELQDIQSRSKEQLNSYT
Sbjct: 301 AYQDIKAKEEQELQDIQSRSKEQLNSYT 328


>gi|50263050 glycoprotein M6B isoform 2 [Homo sapiens]
          Length = 305

 Score =  592 bits (1525), Expect = e-169
 Identities = 285/298 (95%), Positives = 291/298 (97%)

Query: 1   MKPAMETAAEENTEQSQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSP 60
           MKPAMETAAEENTEQSQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSP
Sbjct: 1   MKPAMETAAEENTEQSQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSP 60

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120
           GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL
Sbjct: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120

Query: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 180
           SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT
Sbjct: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 180

Query: 181 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 240
           YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF
Sbjct: 181 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 240

Query: 241 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASK 298
           PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIAL+ ++M  + N+A LK  S+
Sbjct: 241 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSR 298


>gi|24307895 glycoprotein M6B isoform 3 [Homo sapiens]
          Length = 265

 Score =  485 bits (1249), Expect = e-137
 Identities = 245/298 (82%), Positives = 251/298 (84%), Gaps = 40/298 (13%)

Query: 1   MKPAMETAAEENTEQSQERKVNSRAEMEIGRYHWMYPGSKNHQYHPVPTLGDRASPLSSP 60
           MKPAMETAAEENTEQSQERK                                        
Sbjct: 1   MKPAMETAAEENTEQSQERK---------------------------------------- 20

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120
           GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL
Sbjct: 21  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 80

Query: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 180
           SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT
Sbjct: 81  SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 140

Query: 181 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 240
           YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF
Sbjct: 141 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 200

Query: 241 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASK 298
           PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIAL+ ++M  + N+A LK  S+
Sbjct: 201 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSR 258


>gi|50263053 glycoprotein M6B isoform 4 [Homo sapiens]
          Length = 246

 Score =  467 bits (1201), Expect = e-132
 Identities = 225/238 (94%), Positives = 231/238 (97%)

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120
           GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL
Sbjct: 2   GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 61

Query: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 180
           SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT
Sbjct: 62  SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 121

Query: 181 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 240
           YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF
Sbjct: 122 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 181

Query: 241 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLKDASK 298
           PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIAL+ ++M  + N+A LK  S+
Sbjct: 182 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALLIYMMATTYNYAVLKFKSR 239


>gi|42476105 glycoprotein M6A isoform 3 [Homo sapiens]
          Length = 267

 Score =  315 bits (808), Expect = 3e-86
 Identities = 155/276 (56%), Positives = 209/276 (75%), Gaps = 18/276 (6%)

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHF--STNASDHA 118
           GCFECCIKCLGG+PYASL+ATIL ++GVALFCGCGH AL+GTV IL+ +F  +  A D  
Sbjct: 2   GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 61

Query: 119 LLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVF 178
            +  +I + +YVIYGIA+ FF+YGI+L+ EGF+TT A+K+L+G+FK T CGRC+S  F+ 
Sbjct: 62  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 121

Query: 179 LTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVE--QICVDIRQYGIIP 236
           LTY+  +AWLGV  F+++PV+M++N+W+ C          TT VE   +C+D+RQ+GI+ 
Sbjct: 122 LTYLFMLAWLGVTAFTSLPVYMYFNLWTIC--------RNTTLVEGANLCLDLRQFGIVT 173

Query: 237 WNAFPGKICGSALEN---ICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYL 293
                 KIC +  EN   +C + E  M++HLFIVA AGAGA VIA++H+LM+LS+NWAY+
Sbjct: 174 IGE-EKKIC-TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYV 231

Query: 294 KDASKMQAYQDIKAKEEQELQDIQS-RSKEQLNSYT 328
           KDA +MQ Y+DIK+KEEQEL DI S RSKE+LN+YT
Sbjct: 232 KDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT 267


>gi|42476108 glycoprotein M6A isoform 2 [Homo sapiens]
          Length = 278

 Score =  315 bits (808), Expect = 3e-86
 Identities = 155/276 (56%), Positives = 209/276 (75%), Gaps = 18/276 (6%)

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHF--STNASDHA 118
           GCFECCIKCLGG+PYASL+ATIL ++GVALFCGCGH AL+GTV IL+ +F  +  A D  
Sbjct: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72

Query: 119 LLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVF 178
            +  +I + +YVIYGIA+ FF+YGI+L+ EGF+TT A+K+L+G+FK T CGRC+S  F+ 
Sbjct: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 132

Query: 179 LTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVE--QICVDIRQYGIIP 236
           LTY+  +AWLGV  F+++PV+M++N+W+ C          TT VE   +C+D+RQ+GI+ 
Sbjct: 133 LTYLFMLAWLGVTAFTSLPVYMYFNLWTIC--------RNTTLVEGANLCLDLRQFGIVT 184

Query: 237 WNAFPGKICGSALEN---ICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYL 293
                 KIC +  EN   +C + E  M++HLFIVA AGAGA VIA++H+LM+LS+NWAY+
Sbjct: 185 IGE-EKKIC-TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYV 242

Query: 294 KDASKMQAYQDIKAKEEQELQDIQS-RSKEQLNSYT 328
           KDA +MQ Y+DIK+KEEQEL DI S RSKE+LN+YT
Sbjct: 243 KDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT 278


>gi|14149619 glycoprotein M6A isoform 1 [Homo sapiens]
          Length = 278

 Score =  315 bits (808), Expect = 3e-86
 Identities = 155/276 (56%), Positives = 209/276 (75%), Gaps = 18/276 (6%)

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHF--STNASDHA 118
           GCFECCIKCLGG+PYASL+ATIL ++GVALFCGCGH AL+GTV IL+ +F  +  A D  
Sbjct: 13  GCFECCIKCLGGIPYASLIATILLYAGVALFCGCGHEALSGTVNILQTYFEMARTAGDTL 72

Query: 119 LLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVF 178
            +  +I + +YVIYGIA+ FF+YGI+L+ EGF+TT A+K+L+G+FK T CGRC+S  F+ 
Sbjct: 73  DVFTMIDIFKYVIYGIAAAFFVYGILLMVEGFFTTGAIKDLYGDFKITTCGRCVSAWFIM 132

Query: 179 LTYVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVE--QICVDIRQYGIIP 236
           LTY+  +AWLGV  F+++PV+M++N+W+ C          TT VE   +C+D+RQ+GI+ 
Sbjct: 133 LTYLFMLAWLGVTAFTSLPVYMYFNLWTIC--------RNTTLVEGANLCLDLRQFGIVT 184

Query: 237 WNAFPGKICGSALEN---ICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYL 293
                 KIC +  EN   +C + E  M++HLFIVA AGAGA VIA++H+LM+LS+NWAY+
Sbjct: 185 IGE-EKKIC-TVSENFLRMCESTELNMTFHLFIVALAGAGAAVIAMVHYLMVLSANWAYV 242

Query: 294 KDASKMQAYQDIKAKEEQELQDIQS-RSKEQLNSYT 328
           KDA +MQ Y+DIK+KEEQEL DI S RSKE+LN+YT
Sbjct: 243 KDACRMQKYEDIKSKEEQELHDIHSTRSKERLNAYT 278


>gi|41349501 proteolipid protein 1 isoform 2 [Homo sapiens]
          Length = 242

 Score =  281 bits (718), Expect = 7e-76
 Identities = 130/234 (55%), Positives = 169/234 (72%), Gaps = 1/234 (0%)

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120
           G  ECC +CL G P+ASLVAT LCF GVALFCGCGH AL GT  ++E +FS N  D+  L
Sbjct: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEYL 61

Query: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLT 180
             VI   QYVIYG ASFFFLYG +LLAEGFYTT AV+++ G++KTT CG+ +S  FV +T
Sbjct: 62  INVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATFVGIT 121

Query: 181 YVLGVAWLGVFGFSAVPVFMFYNIWSTCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAF 240
           Y L V WL VF  SAVPV++++N W+TC+ I  P +  +  +  +C D R YG++PWNAF
Sbjct: 122 YALTVVWLLVFACSAVPVYIYFNTWTTCQSIAFP-SKTSASIGSLCADARMYGVLPWNAF 180

Query: 241 PGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMILSSNWAYLK 294
           PGK+CGS L +IC T EF M++HLFI A  GA AT+++L+ F++  + N+A LK
Sbjct: 181 PGKVCGSNLLSICKTAEFQMTFHLFIAAFVGAAATLVSLLTFMIAATYNFAVLK 234


>gi|41349499 proteolipid protein 1 isoform 1 [Homo sapiens]
          Length = 277

 Score =  263 bits (672), Expect = 2e-70
 Identities = 130/269 (48%), Positives = 168/269 (62%), Gaps = 36/269 (13%)

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120
           G  ECC +CL G P+ASLVAT LCF GVALFCGCGH AL GT  ++E +FS N  D+  L
Sbjct: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEYL 61

Query: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGM----- 175
             VI   QYVIYG ASFFFLYG +LLAEGFYTT AV+++ G++KTT CG+ +S       
Sbjct: 62  INVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATVTGGQ 121

Query: 176 ------------------------------FVFLTYVLGVAWLGVFGFSAVPVFMFYNIW 205
                                         FV +TY L V WL VF  SAVPV++++N W
Sbjct: 122 KGRGSRGQHQAHSLERVCHCLGKWLGHPDKFVGITYALTVVWLLVFACSAVPVYIYFNTW 181

Query: 206 STCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLF 265
           +TC+ I  P     + +  +C D R YG++PWNAFPGK+CGS L +IC T EF M++HLF
Sbjct: 182 TTCQSIAFPSKTSAS-IGSLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFHLF 240

Query: 266 IVACAGAGATVIALIHFLMILSSNWAYLK 294
           I A  GA AT+++L+ F++  + N+A LK
Sbjct: 241 IAAFVGAAATLVSLLTFMIAATYNFAVLK 269


>gi|192449447 proteolipid protein 1 isoform 1 [Homo sapiens]
          Length = 277

 Score =  263 bits (672), Expect = 2e-70
 Identities = 130/269 (48%), Positives = 168/269 (62%), Gaps = 36/269 (13%)

Query: 61  GCFECCIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAILEQHFSTNASDHALL 120
           G  ECC +CL G P+ASLVAT LCF GVALFCGCGH AL GT  ++E +FS N  D+  L
Sbjct: 2   GLLECCARCLVGAPFASLVATGLCFFGVALFCGCGHEALTGTEKLIETYFSKNYQDYEYL 61

Query: 121 SEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGM----- 175
             VI   QYVIYG ASFFFLYG +LLAEGFYTT AV+++ G++KTT CG+ +S       
Sbjct: 62  INVIHAFQYVIYGTASFFFLYGALLLAEGFYTTGAVRQIFGDYKTTICGKGLSATVTGGQ 121

Query: 176 ------------------------------FVFLTYVLGVAWLGVFGFSAVPVFMFYNIW 205
                                         FV +TY L V WL VF  SAVPV++++N W
Sbjct: 122 KGRGSRGQHQAHSLERVCHCLGKWLGHPDKFVGITYALTVVWLLVFACSAVPVYIYFNTW 181

Query: 206 STCEVIKSPQTNGTTGVEQICVDIRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLF 265
           +TC+ I  P     + +  +C D R YG++PWNAFPGK+CGS L +IC T EF M++HLF
Sbjct: 182 TTCQSIAFPSKTSAS-IGSLCADARMYGVLPWNAFPGKVCGSNLLSICKTAEFQMTFHLF 240

Query: 266 IVACAGAGATVIALIHFLMILSSNWAYLK 294
           I A  GA AT+++L+ F++  + N+A LK
Sbjct: 241 IAAFVGAAATLVSLLTFMIAATYNFAVLK 269


>gi|52317100 olfactory receptor, family 5, subfamily A, member 1
           [Homo sapiens]
          Length = 315

 Score = 33.5 bits (75), Expect = 0.27
 Identities = 33/141 (23%), Positives = 60/141 (42%), Gaps = 12/141 (8%)

Query: 52  DRASPLSSPGCFEC------CIKCLGGVPYASLVATILCFSGVALFCGCGHVALAGTVAI 105
           DR + +SSP  +        C + + G      +++++  S +     CG   +      
Sbjct: 124 DRYAAISSPLLYPTIMTQGLCTRMVVGAYVGGFLSSLIQASSIFRLHFCGPNIINHFFCD 183

Query: 106 LEQHFSTNASDHALLSEVIQLMQYVIYGIASFFFLYGIILLAEGFYTTSAVKELHGEFKT 165
           L    + + SD   LS+V+  +  V  G  SF  L    L++ G+  ++ +K    E + 
Sbjct: 184 LPPVLALSCSD-TFLSQVVNFLVVVTVGGTSFLQL----LISYGYIVSAVLKIPSAEGRW 238

Query: 166 TACGRCISGMFVFLTYVLGVA 186
            AC  C S + V +T + G A
Sbjct: 239 KACNTCASHLMV-VTLLFGTA 258


>gi|118442843 olfactory receptor, family 2, subfamily C, member 1
           [Homo sapiens]
          Length = 312

 Score = 30.4 bits (67), Expect = 2.3
 Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 10/79 (12%)

Query: 137 FFFLYGIILLAEGFYTTSAVK---ELHGEFKTTACGRCISGMFVFLTYVLGVAWLGVFGF 193
           +FFL  +  L   F T+S  +    L G  KT + G CI+ ++VFL       WLG    
Sbjct: 60  YFFLSNLSSLDLAFATSSVPQMLINLWGPGKTISYGGCITQLYVFL-------WLGATEC 112

Query: 194 SAVPVFMFYNIWSTCEVIK 212
             + V  F    + C  ++
Sbjct: 113 ILLVVMAFDRYVAVCRPLR 131


>gi|37675280 ajuba isoform 2 [Homo sapiens]
          Length = 121

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)

Query: 60 PGCFEC--CIKCLGGVPY 75
          PGCF C  C KCL G+P+
Sbjct: 7  PGCFRCIVCNKCLDGIPF 24


>gi|14249622 ajuba isoform 1 [Homo sapiens]
          Length = 538

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)

Query: 60  PGCFEC--CIKCLGGVPY 75
           PGCF C  C KCL G+P+
Sbjct: 424 PGCFRCIVCNKCLDGIPF 441


>gi|111378393 sodium channel, voltage-gated, type VII, alpha [Homo
            sapiens]
          Length = 1682

 Score = 29.3 bits (64), Expect = 5.0
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 168  CGRCISGMFVFLTYVLGVAWLGVFGFSAVPVFMFYNIWS 206
            CG    G+F F++Y+L ++WL +     V V  F NI S
Sbjct: 1466 CGNPSVGIFYFVSYIL-ISWLIIVNMYIVVVMEFLNIAS 1503


>gi|222144233 fibroblast growth factor receptor 2 isoform 4
           precursor [Homo sapiens]
          Length = 709

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 38  GSKNHQYH-PVPTLGDRASPLSSPGCFECCIKCLGGVPYASLVATIL 83
           GS NH YH  V   G      +SP   E  I C+G    A +V T++
Sbjct: 238 GSINHTYHLDVVAPGREKEITASPDYLEIAIYCIGVFLIACMVVTVI 284


>gi|7657683 solute carrier family 7, (cationic amino acid
           transporter, y+ system) member 11 [Homo sapiens]
          Length = 501

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 16/45 (35%), Positives = 20/45 (44%)

Query: 139 FLYGIILLAEGFYTTSAVKELHGEFKTTACGRCISGMFVFLTYVL 183
           F YG+   A  FY     +E+    KT     CIS   V + YVL
Sbjct: 239 FYYGMYAYAGWFYLNFVTEEVENPEKTIPLAICISMAIVTIGYVL 283


>gi|7657307 LIM domains containing 1 [Homo sapiens]
          Length = 676

 Score = 28.9 bits (63), Expect = 6.6
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 2/18 (11%)

Query: 60  PGCFEC--CIKCLGGVPY 75
           PGCF C  C +CL GVP+
Sbjct: 558 PGCFRCVICNECLDGVPF 575


>gi|4758284 ephrin receptor EphB1 precursor [Homo sapiens]
          Length = 984

 Score = 28.5 bits (62), Expect = 8.6
 Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 3/79 (3%)

Query: 227 VDIRQYGIIPWNAFPGKICGSALENICNTNEFYMSYHLFIVACAGAGATVIALIHFLMIL 286
           V +R   +  +  F GK+C   L +    +E      L   + A     V++L+   ++ 
Sbjct: 504 VQVRARTVAGYGKFSGKMCFQTLTDDDYKSELREQLPLIAGSAAAGVVFVVSLVAISIVC 563

Query: 287 SSNWAYLKDA---SKMQAY 302
           S   AY K+A    K+Q Y
Sbjct: 564 SRKRAYSKEAVYSDKLQHY 582


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.324    0.136    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,375,503
Number of Sequences: 37866
Number of extensions: 543791
Number of successful extensions: 1893
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1864
Number of HSP's gapped (non-prelim): 22
length of query: 328
length of database: 18,247,518
effective HSP length: 103
effective length of query: 225
effective length of database: 14,347,320
effective search space: 3228147000
effective search space used: 3228147000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.