Guide to the Human Genome
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Name: GPR20 Sequence: fasta or formatted (358aa) NCBI GI: 89257346
Description:

G protein-coupled receptor 20

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.3         37           2
 C cysteine            4.5         16           2
 D aspartate           1.7          6           1
 E glutamate           2.2          8           2
 F phenylalanine       5.3         19           1
 G glycine             7.8         28           1
 H histidine           4.2         15           2
 I isoleucine          3.4         12           2
 K lysine              0.6          2           1
 L leucine            13.7         49           3
 M methionine          2.2          8           1
 N asparagine          2.0          7           1
 P proline             5.9         21           1
 Q glutamine           2.2          8           1
 R arginine            7.3         26           2
 S serine              6.7         24           2
 T threonine           6.1         22           2
 V valine             10.9         39           2
 W tryptophan          0.8          3           1
 Y tyrosine            2.2          8           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 20 
LPAR5                 0.143   lysophosphatidic acid receptor 5 
LPAR5                 0.143   lysophosphatidic acid receptor 5 
LPAR4                 0.138   lysophosphatidic acid receptor 4 
F2RL1                 0.137   coagulation factor II (thrombin) receptor-like 1 pre...
LPAR6                 0.137   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.137   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.137   G-protein coupled purinergic receptor P2Y5 
P2RY8                 0.136   G-protein coupled purinergic receptor P2Y8 
P2RY4                 0.131   pyrimidinergic receptor P2Y4 
GPR17                 0.130   G protein-coupled receptor 17 isoform b 
GPR17                 0.130   G protein-coupled receptor 17 isoform b 
GPR17                 0.130   G protein-coupled receptor 17 isoform a 
GPR17                 0.130   G protein-coupled receptor 17 isoform a 
P2RY2                 0.128   purinergic receptor P2Y2 
P2RY2                 0.128   purinergic receptor P2Y2 
P2RY2                 0.128   purinergic receptor P2Y2 
GPR183                0.127   EBV-induced G protein-coupled receptor 2 
GPR35                 0.126   G protein-coupled receptor 35 
AGTR2                 0.126   angiotensin II receptor, type 2 
F2R                   0.124   coagulation factor II receptor precursor 
OPRK1                 0.123   opioid receptor, kappa 1 
SSTR4                 0.121   somatostatin receptor 4 
OXER1                 0.121   G-protein coupled receptor TG1019 
OPRM1                 0.118   opioid receptor, mu 1 isoform MOR-1H 
OPRM1                 0.118   opioid receptor, mu 1 isoform MOR-1 
OPRM1                 0.118   opioid receptor, mu 1 isoform MOR-1B5 
OPRM1                 0.118   opioid receptor, mu 1 isoform MOR-1B2 
OPRM1                 0.118   opioid receptor, mu 1 isoform MOR-1B3 
OPRM1                 0.118   opioid receptor, mu 1 isoform MOR-1B1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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