Guide to the Human Genome
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Name: GPR17 Sequence: fasta or formatted (339aa) NCBI GI: 238814307
Description:

G protein-coupled receptor 17 isoform b

Referenced in:

G-Protein-coupled Receptors
Oligodendrocytes and Myelin

Other entries for this name:
alt prot [367aa] G protein-coupled receptor 17 isoform a
alt mRNA [339aa] G protein-coupled receptor 17 isoform b
alt prot [367aa] G protein-coupled receptor 17 isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.0         34           1
 C cysteine            3.5         12           1
 D aspartate           1.5          5           1
 E glutamate           3.2         11           1
 F phenylalanine       6.5         22           2
 G glycine             4.1         14           1
 H histidine           3.8         13           2
 I isoleucine          4.7         16           2
 K lysine              3.5         12           1
 L leucine            15.6         53           2
 M methionine          2.1          7           1
 N asparagine          3.8         13           1
 P proline             4.7         16           3
 Q glutamine           2.1          7           1
 R arginine            5.3         18           2
 S serine              6.5         22           2
 T threonine           5.9         20           2
 V valine              8.6         29           3
 W tryptophan          0.9          3           1
 Y tyrosine            3.5         12           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 17 isoform b 
GPR17                 1.000   G protein-coupled receptor 17 isoform b 
GPR17                 1.000   G protein-coupled receptor 17 isoform a 
GPR17                 1.000   G protein-coupled receptor 17 isoform a 
P2RY4                 0.259   pyrimidinergic receptor P2Y4 
CYSLTR2               0.239   cysteinyl leukotriene receptor 2 
P2RY2                 0.230   purinergic receptor P2Y2 
P2RY2                 0.230   purinergic receptor P2Y2 
P2RY2                 0.230   purinergic receptor P2Y2 
P2RY1                 0.226   purinergic receptor P2Y1 
LPAR6                 0.224   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.224   G-protein coupled purinergic receptor P2Y5 
LPAR6                 0.224   G-protein coupled purinergic receptor P2Y5 
LPAR4                 0.223   lysophosphatidic acid receptor 4 
GPR183                0.223   EBV-induced G protein-coupled receptor 2 
CYSLTR1               0.221   cysteinyl leukotriene receptor 1 
F2R                   0.220   coagulation factor II receptor precursor 
APLNR                 0.215   apelin receptor 
GPR34                 0.212   G protein-coupled receptor 34 
GPR34                 0.212   G protein-coupled receptor 34 
P2RY10                0.209   G-protein coupled purinergic receptor P2Y10 
P2RY10                0.209   G-protein coupled purinergic receptor P2Y10 
F2RL1                 0.207   coagulation factor II (thrombin) receptor-like 1 pre...
GPR174                0.203   putative purinergic receptor FKSG79 
OXGR1                 0.195   oxoglutarate (alpha-ketoglutarate) receptor 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
AGTR1                 0.194   angiotensin II receptor, type 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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