Guide to the Human Genome
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Name: GPR44 Sequence: fasta or formatted (395aa) NCBI GI: 153791424
Description:

G protein-coupled receptor 44

Referenced in:

G-Protein-coupled Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            10.9         43           3
 C cysteine            2.8         11           1
 D aspartate           2.5         10           2
 E glutamate           2.0          8           2
 F phenylalanine       4.8         19           2
 G glycine             5.3         21           2
 H histidine           3.0         12           1
 I isoleucine          2.5         10           2
 K lysine              1.3          5           1
 L leucine            16.2         64           3
 M methionine          1.5          6           1
 N asparagine          3.3         13           1
 P proline             5.3         21           1
 Q glutamine           2.0          8           1
 R arginine            8.9         35           4
 S serine             10.1         40           2
 T threonine           4.8         19           2
 V valine              9.1         36           2
 W tryptophan          1.8          7           1
 Y tyrosine            1.8          7           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   G protein-coupled receptor 44 
CMKLR1                0.239   chemokine-like receptor 1 isoform a 
CMKLR1                0.239   chemokine-like receptor 1 isoform a 
CMKLR1                0.239   chemokine-like receptor 1 isoform a 
CMKLR1                0.239   chemokine-like receptor 1 isoform b 
FPR2                  0.220   formyl peptide receptor-like 1 
FPR2                  0.220   formyl peptide receptor-like 1 
FPR1                  0.211   formyl peptide receptor 1 
FPR3                  0.210   formyl peptide receptor-like 2 
GPR1                  0.194   G protein-coupled receptor 1 
GPR1                  0.194   G protein-coupled receptor 1 
C5AR1                 0.169   complement component 5 receptor 1 
C3AR1                 0.150   complement component 3a receptor 1 
GPR32                 0.150   G protein-coupled receptor 32 
LTB4R                 0.146   leukotriene B4 receptor 
LTB4R                 0.146   leukotriene B4 receptor 
GPR77                 0.145   G protein-coupled receptor 77 
AGTR2                 0.139   angiotensin II receptor, type 2 
LTB4R2                0.135   leukotriene B4 receptor 2 
APLNR                 0.132   apelin receptor 
SSTR2                 0.128   somatostatin receptor 2 
P2RY2                 0.127   purinergic receptor P2Y2 
P2RY2                 0.127   purinergic receptor P2Y2 
P2RY2                 0.127   purinergic receptor P2Y2 
OPRD1                 0.125   opioid receptor, delta 1 
AGTR1                 0.124   angiotensin II receptor, type 1 
AGTR1                 0.124   angiotensin II receptor, type 1 
AGTR1                 0.124   angiotensin II receptor, type 1 
AGTR1                 0.124   angiotensin II receptor, type 1 
AGTR1                 0.124   angiotensin II receptor, type 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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