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Search of human proteins with 4885073
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885073 activating transcription factor 1 [Homo sapiens]
(271 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885073 activating transcription factor 1 [Homo sapiens] 523 e-149
gi|4758054 cAMP responsive element binding protein 1 isoform A [... 313 8e-86
gi|19745184 cAMP responsive element binding protein 1 isoform B ... 311 3e-85
gi|34335222 cAMP responsive element modulator isoform u [Homo sa... 262 3e-70
gi|34335186 cAMP responsive element modulator isoform a [Homo sa... 249 2e-66
gi|34335214 cAMP responsive element modulator isoform o [Homo sa... 249 2e-66
gi|34335210 cAMP responsive element modulator isoform m [Homo sa... 247 7e-66
gi|34335226 cAMP responsive element modulator isoform s [Homo sa... 166 3e-41
gi|34335224 cAMP responsive element modulator isoform t [Homo sa... 156 2e-38
gi|34335228 cAMP responsive element modulator isoform v [Homo sa... 144 1e-34
gi|34335216 cAMP responsive element modulator isoform p [Homo sa... 144 1e-34
gi|34335212 cAMP responsive element modulator isoform n [Homo sa... 142 4e-34
gi|34335188 cAMP responsive element modulator isoform d [Homo sa... 130 1e-30
gi|34335196 cAMP responsive element modulator isoform h [Homo sa... 129 4e-30
gi|34335200 cAMP responsive element modulator isoform j [Homo sa... 128 5e-30
gi|34335194 cAMP responsive element modulator isoform g [Homo sa... 128 5e-30
gi|34335198 cAMP responsive element modulator isoform i [Homo sa... 122 4e-28
gi|34335220 cAMP responsive element modulator isoform r [Homo sa... 122 4e-28
gi|34335192 cAMP responsive element modulator isoform f [Homo sa... 117 8e-27
gi|34335202 cAMP responsive element modulator isoform k [Homo sa... 116 2e-26
gi|34335190 cAMP responsive element modulator isoform e [Homo sa... 115 3e-26
gi|34335204 cAMP responsive element modulator isoform l [Homo sa... 109 3e-24
gi|34335218 cAMP responsive element modulator isoform q [Homo sa... 109 3e-24
gi|34335206 cAMP responsive element modulator isoform b [Homo sa... 67 2e-11
gi|16418355 cAMP responsive element binding protein 3-like 1 [Ho... 63 3e-10
gi|56786157 activating transcription factor 6 [Homo sapiens] 58 8e-09
gi|56550067 cAMP responsive element binding protein 3-like 2 [Ho... 52 7e-07
gi|209954788 activating transcription factor 6 beta isoform b [H... 50 2e-06
gi|20631977 activating transcription factor 6 beta isoform a [Ho... 50 2e-06
gi|18702325 cAMP responsive element binding protein 3-like 4 [Ho... 49 5e-06
>gi|4885073 activating transcription factor 1 [Homo sapiens]
Length = 271
Score = 523 bits (1347), Expect = e-149
Identities = 271/271 (100%), Positives = 271/271 (100%)
Query: 1 MEDSHKSTTSETAPQPGSAVQGAHISHIAQQVSSLSESEESQDSSDSIGSSQKAHGILAR 60
MEDSHKSTTSETAPQPGSAVQGAHISHIAQQVSSLSESEESQDSSDSIGSSQKAHGILAR
Sbjct: 1 MEDSHKSTTSETAPQPGSAVQGAHISHIAQQVSSLSESEESQDSSDSIGSSQKAHGILAR 60
Query: 61 RPSYRKILKDLSSEDTRGRKGDGENSGVSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQL 120
RPSYRKILKDLSSEDTRGRKGDGENSGVSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQL
Sbjct: 61 RPSYRKILKDLSSEDTRGRKGDGENSGVSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQL 120
Query: 121 ASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQ 180
ASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQ
Sbjct: 121 ASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQ 180
Query: 181 IRTTPSATSLPQTVVMTSPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKC 240
IRTTPSATSLPQTVVMTSPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKC
Sbjct: 181 IRTTPSATSLPQTVVMTSPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKC 240
Query: 241 LENRVAVLENQNKTLIEELKTLKDLYSNKSV 271
LENRVAVLENQNKTLIEELKTLKDLYSNKSV
Sbjct: 241 LENRVAVLENQNKTLIEELKTLKDLYSNKSV 271
>gi|4758054 cAMP responsive element binding protein 1 isoform A
[Homo sapiens]
Length = 327
Score = 313 bits (803), Expect = 8e-86
Identities = 170/261 (65%), Positives = 202/261 (77%), Gaps = 9/261 (3%)
Query: 13 APQPGSAVQGAHISHIAQQVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLS 72
A QP S +Q + + Q+S+++ESE+SQ+S DS+ SQK IL+RRPSYRKIL DLS
Sbjct: 72 AAQP-SVIQSPQVQTV--QISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLS 128
Query: 73 SEDT---RGRKGDGENSGVSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQ 129
S+ R + E + A+T+++VPTPIYQTSSGQYIAI GA+QLA+ GTDGVQ
Sbjct: 129 SDAPGVPRIEEEKSEEETSAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQ 188
Query: 130 GLQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATS 189
GLQTLTMTN+ +TQ GTTILQYAQT+DGQQILVPSNQVVVQ ASGD+QTYQIRT P++T
Sbjct: 189 GLQTLTMTNAAATQPGTTILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTSTI 248
Query: 190 LPQTVVMTSPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLE 249
P V+ +SP T ++ KRE+RLMKNREAARECRRKKKEYVKCLENRVAVLE
Sbjct: 249 APGVVMASSPAL---PTQPAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLE 305
Query: 250 NQNKTLIEELKTLKDLYSNKS 270
NQNKTLIEELK LKDLY +KS
Sbjct: 306 NQNKTLIEELKALKDLYCHKS 326
>gi|19745184 cAMP responsive element binding protein 1 isoform B
[Homo sapiens]
Length = 341
Score = 311 bits (798), Expect = 3e-85
Identities = 165/243 (67%), Positives = 194/243 (79%), Gaps = 6/243 (2%)
Query: 31 QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDT---RGRKGDGENSG 87
Q+S+++ESE+SQ+S DS+ SQK IL+RRPSYRKIL DLSS+ R + E
Sbjct: 101 QISTIAESEDSQESVDSVTDSQKRREILSRRPSYRKILNDLSSDAPGVPRIEEEKSEEET 160
Query: 88 VSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTT 147
+ A+T+++VPTPIYQTSSGQYIAI GA+QLA+ GTDGVQGLQTLTMTN+ +TQ GTT
Sbjct: 161 SAPAITTVTVPTPIYQTSSGQYIAITQGGAIQLANNGTDGVQGLQTLTMTNAAATQPGTT 220
Query: 148 ILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMTSPVTLTSQTT 207
ILQYAQT+DGQQILVPSNQVVVQ ASGD+QTYQIRT P++T P V+ +SP T
Sbjct: 221 ILQYAQTTDGQQILVPSNQVVVQAASGDVQTYQIRTAPTSTIAPGVVMASSPAL---PTQ 277
Query: 208 KTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYS 267
++ KRE+RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELK LKDLY
Sbjct: 278 PAEEAARKREVRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYC 337
Query: 268 NKS 270
+KS
Sbjct: 338 HKS 340
>gi|34335222 cAMP responsive element modulator isoform u [Homo
sapiens]
Length = 299
Score = 262 bits (669), Expect = 3e-70
Identities = 150/245 (61%), Positives = 183/245 (74%), Gaps = 9/245 (3%)
Query: 31 QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---G 87
QV++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S G
Sbjct: 56 QVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 114
Query: 88 VSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTT 147
++ +M+VPT IYQTS+GQYIAIA G +Q+++PG+DGVQGLQ LTMTNSG+ G T
Sbjct: 115 TPPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGAT 174
Query: 148 ILQYA-QTSDG-QQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTS 204
I+QYA Q++DG QQ VP +QVVVQ A+GDM TYQIR +A LPQ VVM SP +L S
Sbjct: 175 IVQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHS 232
Query: 205 QTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKD 264
++ KRE+RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELK LKD
Sbjct: 233 PQQLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKD 292
Query: 265 LYSNK 269
LY +K
Sbjct: 293 LYCHK 297
>gi|34335186 cAMP responsive element modulator isoform a [Homo
sapiens]
Length = 300
Score = 249 bits (636), Expect = 2e-66
Identities = 144/246 (58%), Positives = 182/246 (73%), Gaps = 9/246 (3%)
Query: 31 QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---G 87
QV++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S G
Sbjct: 56 QVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 114
Query: 88 VSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTT 147
++ +M+VPT IYQTS+GQYIAIA G +Q+++PG+DGVQGLQ LTMTNSG+ G T
Sbjct: 115 TPPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGAT 174
Query: 148 ILQYA-QTSDG-QQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTS 204
I+QYA Q++DG QQ VP +QVVVQ A+GDM TYQIR +A LPQ VVM SP +L S
Sbjct: 175 IVQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHS 232
Query: 205 QTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKD 264
++ KRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+TLKD
Sbjct: 233 PQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKD 292
Query: 265 LYSNKS 270
+ S K+
Sbjct: 293 ICSPKT 298
>gi|34335214 cAMP responsive element modulator isoform o [Homo
sapiens]
Length = 270
Score = 249 bits (636), Expect = 2e-66
Identities = 143/249 (57%), Positives = 184/249 (73%), Gaps = 9/249 (3%)
Query: 28 IAQQVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS- 86
+ ++V++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S
Sbjct: 23 VEEKVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSE 81
Query: 87 --GVSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQ 144
G ++ +M+VPT IYQTS+GQYIAIA G +Q+++PG+DGVQGLQ LTMTNSG+
Sbjct: 82 EEGTPPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPP 141
Query: 145 GTTILQYA-QTSDG-QQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVT 201
G TI+QYA Q++DG QQ VP +QVVVQ A+GDM TYQIR +A LPQ VVM SP +
Sbjct: 142 GATIVQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAA--LPQGVVMAASPGS 199
Query: 202 LTSQTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKT 261
L S ++ KRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+T
Sbjct: 200 LHSPQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELET 259
Query: 262 LKDLYSNKS 270
LKD+ S K+
Sbjct: 260 LKDICSPKT 268
>gi|34335210 cAMP responsive element modulator isoform m [Homo
sapiens]
Length = 245
Score = 247 bits (631), Expect = 7e-66
Identities = 143/245 (58%), Positives = 181/245 (73%), Gaps = 9/245 (3%)
Query: 32 VSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---GV 88
V++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S G
Sbjct: 2 VAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60
Query: 89 SAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTTI 148
++ +M+VPT IYQTS+GQYIAIA G +Q+++PG+DGVQGLQ LTMTNSG+ G TI
Sbjct: 61 PPSIATMAVPTSIYQTSTGQYIAIAQGGTIQISNPGSDGVQGLQALTMTNSGAPPPGATI 120
Query: 149 LQYA-QTSDG-QQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQ 205
+QYA Q++DG QQ VP +QVVVQ A+GDM TYQIR +A LPQ VVM SP +L S
Sbjct: 121 VQYAAQSADGTQQFFVPGSQVVVQAATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSP 178
Query: 206 TTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDL 265
++ KRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+TLKD+
Sbjct: 179 QQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDI 238
Query: 266 YSNKS 270
S K+
Sbjct: 239 CSPKT 243
>gi|34335226 cAMP responsive element modulator isoform s [Homo
sapiens]
Length = 248
Score = 166 bits (419), Expect = 3e-41
Identities = 113/243 (46%), Positives = 140/243 (57%), Gaps = 56/243 (23%)
Query: 31 QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---G 87
QV++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S G
Sbjct: 56 QVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 114
Query: 88 VSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTT 147
++ +M+VPT IYQTS+GQ
Sbjct: 115 TPPSIATMAVPTSIYQTSTGQ--------------------------------------- 135
Query: 148 ILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQT 206
Y + ++ L PS+ A+GDM TYQIR +A LPQ VVM SP +L S
Sbjct: 136 ---YNEETE----LAPSHMAA---ATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQ 183
Query: 207 TKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLY 266
++ KRE+RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELK LKDLY
Sbjct: 184 QLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLY 243
Query: 267 SNK 269
+K
Sbjct: 244 CHK 246
>gi|34335224 cAMP responsive element modulator isoform t [Homo
sapiens]
Length = 236
Score = 156 bits (395), Expect = 2e-38
Identities = 110/243 (45%), Positives = 132/243 (54%), Gaps = 68/243 (27%)
Query: 31 QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---G 87
QV++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S G
Sbjct: 56 QVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 114
Query: 88 VSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTT 147
++ +M+VPT IY
Sbjct: 115 TPPSIATMAVPTSIY--------------------------------------------- 129
Query: 148 ILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQT 206
QTS GQ TA+GDM TYQIR +A LPQ VVM SP +L S
Sbjct: 130 -----QTSTGQY-----------TATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQ 171
Query: 207 TKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLY 266
++ KRE+RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELK LKDLY
Sbjct: 172 QLAEEATRKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLY 231
Query: 267 SNK 269
+K
Sbjct: 232 CHK 234
>gi|34335228 cAMP responsive element modulator isoform v [Homo
sapiens]
Length = 221
Score = 144 bits (362), Expect = 1e-34
Identities = 104/244 (42%), Positives = 131/244 (53%), Gaps = 68/244 (27%)
Query: 31 QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---G 87
QV++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S G
Sbjct: 40 QVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 98
Query: 88 VSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTT 147
++ +M+VPT IY
Sbjct: 99 TPPSIATMAVPTSIY--------------------------------------------- 113
Query: 148 ILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQT 206
QTS GQ TA+GDM TYQIR +A LPQ VVM SP +L S
Sbjct: 114 -----QTSTGQY-----------TATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQ 155
Query: 207 TKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLY 266
++ KRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+TLKD+
Sbjct: 156 QLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDIC 215
Query: 267 SNKS 270
S K+
Sbjct: 216 SPKT 219
>gi|34335216 cAMP responsive element modulator isoform p [Homo
sapiens]
Length = 207
Score = 144 bits (362), Expect = 1e-34
Identities = 103/247 (41%), Positives = 133/247 (53%), Gaps = 68/247 (27%)
Query: 28 IAQQVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS- 86
+ ++V++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S
Sbjct: 23 VEEKVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSE 81
Query: 87 --GVSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQ 144
G ++ +M+VPT IY
Sbjct: 82 EEGTPPSIATMAVPTSIY------------------------------------------ 99
Query: 145 GTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLT 203
QTS GQ TA+GDM TYQIR +A LPQ VVM SP +L
Sbjct: 100 --------QTSTGQY-----------TATGDMPTYQIRAPTAA--LPQGVVMAASPGSLH 138
Query: 204 SQTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLK 263
S ++ KRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+TLK
Sbjct: 139 SPQQLAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLK 198
Query: 264 DLYSNKS 270
D+ S K+
Sbjct: 199 DICSPKT 205
>gi|34335212 cAMP responsive element modulator isoform n [Homo
sapiens]
Length = 182
Score = 142 bits (357), Expect = 4e-34
Identities = 103/243 (42%), Positives = 130/243 (53%), Gaps = 68/243 (27%)
Query: 32 VSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---GV 88
V++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S G
Sbjct: 2 VAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEGT 60
Query: 89 SAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTTI 148
++ +M+VPT IY
Sbjct: 61 PPSIATMAVPTSIY---------------------------------------------- 74
Query: 149 LQYAQTSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTT 207
QTS GQ TA+GDM TYQIR +A LPQ VVM SP +L S
Sbjct: 75 ----QTSTGQY-----------TATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQ 117
Query: 208 KTDDPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYS 267
++ KRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+TLKD+ S
Sbjct: 118 LAEEATRKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICS 177
Query: 268 NKS 270
K+
Sbjct: 178 PKT 180
>gi|34335188 cAMP responsive element modulator isoform d [Homo
sapiens]
Length = 120
Score = 130 bits (327), Expect = 1e-30
Identities = 75/116 (64%), Positives = 85/116 (73%), Gaps = 6/116 (5%)
Query: 155 SDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQ 213
+D + L PS+ A+GDM TYQIR +A LPQ VVM SP +L S ++
Sbjct: 8 TDEETELAPSHMAA---ATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEAT 62
Query: 214 LKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNK 269
KRE+RLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELK LKDLY +K
Sbjct: 63 RKRELRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 118
>gi|34335196 cAMP responsive element modulator isoform h [Homo
sapiens]
Length = 112
Score = 129 bits (323), Expect = 4e-30
Identities = 71/102 (69%), Positives = 79/102 (77%), Gaps = 3/102 (2%)
Query: 169 VQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAA 227
+ A+GDM TYQIR +A LPQ VVM SP +L S ++ KRE+RLMKNREAA
Sbjct: 11 LSAATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA 68
Query: 228 RECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNK 269
RECRRKKKEYVKCLENRVAVLENQNKTLIEELK LKDLY +K
Sbjct: 69 RECRRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 110
>gi|34335200 cAMP responsive element modulator isoform j [Homo
sapiens]
Length = 102
Score = 128 bits (322), Expect = 5e-30
Identities = 71/99 (71%), Positives = 78/99 (78%), Gaps = 3/99 (3%)
Query: 172 ASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAAREC 230
A+GDM TYQIR +A LPQ VVM SP +L S ++ KRE+RLMKNREAAREC
Sbjct: 4 ATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAREC 61
Query: 231 RRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNK 269
RRKKKEYVKCLENRVAVLENQNKTLIEELK LKDLY +K
Sbjct: 62 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 100
>gi|34335194 cAMP responsive element modulator isoform g [Homo
sapiens]
Length = 108
Score = 128 bits (322), Expect = 5e-30
Identities = 71/99 (71%), Positives = 78/99 (78%), Gaps = 3/99 (3%)
Query: 172 ASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAAREC 230
A+GDM TYQIR +A LPQ VVM SP +L S ++ KRE+RLMKNREAAREC
Sbjct: 10 ATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAREC 67
Query: 231 RRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNK 269
RRKKKEYVKCLENRVAVLENQNKTLIEELK LKDLY +K
Sbjct: 68 RRKKKEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 106
>gi|34335198 cAMP responsive element modulator isoform i [Homo
sapiens]
Length = 95
Score = 122 bits (305), Expect = 4e-28
Identities = 68/95 (71%), Positives = 74/95 (77%), Gaps = 3/95 (3%)
Query: 176 MQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKK 234
M TYQIR +A LPQ VVM SP +L S ++ KRE+RLMKNREAARECRRKK
Sbjct: 1 MPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKK 58
Query: 235 KEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNK 269
KEYVKCLENRVAVLENQNKTLIEELK LKDLY +K
Sbjct: 59 KEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 93
>gi|34335220 cAMP responsive element modulator isoform r [Homo
sapiens]
Length = 95
Score = 122 bits (305), Expect = 4e-28
Identities = 68/95 (71%), Positives = 74/95 (77%), Gaps = 3/95 (3%)
Query: 176 MQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKK 234
M TYQIR +A LPQ VVM SP +L S ++ KRE+RLMKNREAARECRRKK
Sbjct: 1 MPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAARECRRKK 58
Query: 235 KEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNK 269
KEYVKCLENRVAVLENQNKTLIEELK LKDLY +K
Sbjct: 59 KEYVKCLENRVAVLENQNKTLIEELKALKDLYCHK 93
>gi|34335192 cAMP responsive element modulator isoform f [Homo
sapiens]
Length = 121
Score = 117 bits (294), Expect = 8e-27
Identities = 69/117 (58%), Positives = 84/117 (71%), Gaps = 6/117 (5%)
Query: 155 SDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQ 213
+D + L PS+ A+GDM TYQIR +A LPQ VVM SP +L S ++
Sbjct: 8 TDEETELAPSHMAA---ATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEAT 62
Query: 214 LKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNKS 270
KRE+RLMKNREAA+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+TLKD+ S K+
Sbjct: 63 RKRELRLMKNREAAKECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT 119
>gi|34335202 cAMP responsive element modulator isoform k [Homo
sapiens]
Length = 113
Score = 116 bits (290), Expect = 2e-26
Identities = 65/103 (63%), Positives = 78/103 (75%), Gaps = 3/103 (2%)
Query: 169 VQTASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAA 227
+ A+GDM TYQIR +A LPQ VVM SP +L S ++ KRE+RLMKNREAA
Sbjct: 11 LSAATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAA 68
Query: 228 RECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNKS 270
+ECRR+KKEYVKCLE+RVAVLE QNK LIEEL+TLKD+ S K+
Sbjct: 69 KECRRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT 111
>gi|34335190 cAMP responsive element modulator isoform e [Homo
sapiens]
Length = 109
Score = 115 bits (289), Expect = 3e-26
Identities = 65/100 (65%), Positives = 77/100 (77%), Gaps = 3/100 (3%)
Query: 172 ASGDMQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAAREC 230
A+GDM TYQIR +A LPQ VVM SP +L S ++ KRE+RLMKNREAA+EC
Sbjct: 10 ATGDMPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKEC 67
Query: 231 RRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNKS 270
RR+KKEYVKCLE+RVAVLE QNK LIEEL+TLKD+ S K+
Sbjct: 68 RRRKKEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT 107
>gi|34335204 cAMP responsive element modulator isoform l [Homo
sapiens]
Length = 96
Score = 109 bits (272), Expect = 3e-24
Identities = 62/96 (64%), Positives = 73/96 (76%), Gaps = 3/96 (3%)
Query: 176 MQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKK 234
M TYQIR +A LPQ VVM SP +L S ++ KRE+RLMKNREAA+ECRR+K
Sbjct: 1 MPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRK 58
Query: 235 KEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNKS 270
KEYVKCLE+RVAVLE QNK LIEEL+TLKD+ S K+
Sbjct: 59 KEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT 94
>gi|34335218 cAMP responsive element modulator isoform q [Homo
sapiens]
Length = 96
Score = 109 bits (272), Expect = 3e-24
Identities = 62/96 (64%), Positives = 73/96 (76%), Gaps = 3/96 (3%)
Query: 176 MQTYQIRTTPSATSLPQTVVMT-SPVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKK 234
M TYQIR +A LPQ VVM SP +L S ++ KRE+RLMKNREAA+ECRR+K
Sbjct: 1 MPTYQIRAPTAA--LPQGVVMAASPGSLHSPQQLAEEATRKRELRLMKNREAAKECRRRK 58
Query: 235 KEYVKCLENRVAVLENQNKTLIEELKTLKDLYSNKS 270
KEYVKCLE+RVAVLE QNK LIEEL+TLKD+ S K+
Sbjct: 59 KEYVKCLESRVAVLEVQNKKLIEELETLKDICSPKT 94
>gi|34335206 cAMP responsive element modulator isoform b [Homo
sapiens]
Length = 137
Score = 66.6 bits (161), Expect = 2e-11
Identities = 39/82 (47%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Query: 31 QVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSSEDTRGRKGDGENS---G 87
QV++++E++ES +S I S K IL+RRPSYRKIL +LSS+ K + E S G
Sbjct: 40 QVAAIAETDESAESEGVI-DSHKRREILSRRPSYRKILNELSSDVPGVPKIEEERSEEEG 98
Query: 88 VSAAVTSMSVPTPIYQTSSGQY 109
++ +M+VPT IYQTS+GQY
Sbjct: 99 TPPSIATMAVPTSIYQTSTGQY 120
>gi|16418355 cAMP responsive element binding protein 3-like 1 [Homo
sapiens]
Length = 519
Score = 62.8 bits (151), Expect = 3e-10
Identities = 66/214 (30%), Positives = 98/214 (45%), Gaps = 35/214 (16%)
Query: 90 AAVTSMSVPTPIYQTSSGQYIAI---APNGALQLASPGTDGVQGLQTLTMTNSGSTQQGT 146
AA +M+ TP+ S + I AP QL + ++ Q L +T Q
Sbjct: 148 AAAAAMAT-TPLLGLSPLSRLPIPHQAPGEMTQLPVIKAEPLEVNQFLKVTPEDLVQMPP 206
Query: 147 TI-LQYAQTSDGQQI---LVPSNQV-VVQTASGDMQTYQIRTTP---SATSLPQTVVMTS 198
T + SDG Q L PS+ V + +S + T + T P TS P +
Sbjct: 207 TPPSSHGSDSDGSQSPRSLPPSSPVRPMARSSTAISTSPLLTAPHKLQGTSGPLLLTEEE 266
Query: 199 PVTLTSQ---------TTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLE------- 242
TL ++ TK ++ LKR R +KN+ +A+E RRKKKEYV+CLE
Sbjct: 267 KRTLIAEGYPIPTKLPLTKAEEKALKRVRRKIKNKISAQESRRKKKEYVECLEKKVETFT 326
Query: 243 -------NRVAVLENQNKTLIEELKTLKDLYSNK 269
+V LEN N+TL+++L+ L+ L +NK
Sbjct: 327 SENNELWKKVETLENANRTLLQQLQKLQTLVTNK 360
>gi|56786157 activating transcription factor 6 [Homo sapiens]
Length = 670
Score = 58.2 bits (139), Expect = 8e-09
Identities = 77/277 (27%), Positives = 115/277 (41%), Gaps = 37/277 (13%)
Query: 14 PQPGSAVQGAHISHIAQQVSSLSESEESQDSSDSIGSSQKAHGILARRPSYRKILKDLSS 73
PQP S ++ + V S S ++ + D SSQ + L Y + LSS
Sbjct: 90 PQPLSPASSSYSVSSPRSVDSYSSTQHVPEELDLSSSSQMSPLSL-----YGENSNSLSS 144
Query: 74 EDTRGRKGDGENSGVSAAVTSMSVPTPIYQTSSGQYIAIAPNGALQLASPGTDGVQG--- 130
+ K D +G + P Q +S +I P L A+P T
Sbjct: 145 AEPL--KEDKPVTGPRNKTENGLTPKKKIQVNSKP--SIQPKPLLLPAAPKTQTNSSVPA 200
Query: 131 ----LQTLTMTNSGSTQQGTTILQYAQTSDGQQILVPSNQVVVQTASGDMQTYQ--IRTT 184
+QT+ + QQ LQ A T GQ +L+ VV A G + + Q +
Sbjct: 201 KTIIIQTVPTLMPLAKQQPIISLQPAPTK-GQTVLLSQPTVVQLQAPGVLPSAQPVLAVA 259
Query: 185 PSATSLPQTVV-----------------MTSPVTL-TSQTTKTDDPQLKREIRLMKNREA 226
T LP VV +T PV T + +D L+R+ R++KNRE+
Sbjct: 260 GGVTQLPNHVVNVVPAPSANSPVNGKLSVTKPVLQSTMRNVGSDIAVLRRQQRMIKNRES 319
Query: 227 ARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLK 263
A + R+KKKEY+ LE R+ ++N+ L +E TLK
Sbjct: 320 ACQSRKKKKEYMLGLEARLKAALSENEQLKKENGTLK 356
>gi|56550067 cAMP responsive element binding protein 3-like 2 [Homo
sapiens]
Length = 520
Score = 51.6 bits (122), Expect = 7e-07
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 14/85 (16%)
Query: 199 PVTLTSQTTKTDDPQLKREIRLMKNREAARECRRKKKEYVKCLE--------------NR 244
P+ +K+++ LK+ R +KN+ +A+E RRKKKEY+ LE +
Sbjct: 280 PIPTKLPLSKSEEKALKKIRRKIKNKISAQESRRKKKEYMDSLEKKVESCSTENLELRKK 339
Query: 245 VAVLENQNKTLIEELKTLKDLYSNK 269
V VLEN N+TL+++L+ L+ L K
Sbjct: 340 VEVLENTNRTLLQQLQKLQTLVMGK 364
>gi|209954788 activating transcription factor 6 beta isoform b [Homo
sapiens]
Length = 700
Score = 50.1 bits (118), Expect = 2e-06
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 10/170 (5%)
Query: 97 VPTP---IYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQ 153
VP P Q S G + + AL P + T S + TT+L
Sbjct: 210 VPAPSLGAVQISMGPSLDGSSGKALPTRKPPLQPKPVVLTTVPMPSRAVPPSTTVLL--- 266
Query: 154 TSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMTSPVTLTSQTTKTDDPQ 213
Q ++ P V G ++ PS + ++ +P+ S + D
Sbjct: 267 ----QSLVQPPPVSPVVLIQGAIRVQPEGPAPSLPRPERKSIVPAPMPGNSCPPEVDAKL 322
Query: 214 LKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLK 263
LKR+ R++KNRE+A + RRKKKEY++ LE R+ + N+ L E L+
Sbjct: 323 LKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALR 372
>gi|20631977 activating transcription factor 6 beta isoform a [Homo
sapiens]
Length = 703
Score = 50.1 bits (118), Expect = 2e-06
Identities = 46/170 (27%), Positives = 72/170 (42%), Gaps = 10/170 (5%)
Query: 97 VPTP---IYQTSSGQYIAIAPNGALQLASPGTDGVQGLQTLTMTNSGSTQQGTTILQYAQ 153
VP P Q S G + + AL P + T S + TT+L
Sbjct: 213 VPAPSLGAVQISMGPSLDGSSGKALPTRKPPLQPKPVVLTTVPMPSRAVPPSTTVLL--- 269
Query: 154 TSDGQQILVPSNQVVVQTASGDMQTYQIRTTPSATSLPQTVVMTSPVTLTSQTTKTDDPQ 213
Q ++ P V G ++ PS + ++ +P+ S + D
Sbjct: 270 ----QSLVQPPPVSPVVLIQGAIRVQPEGPAPSLPRPERKSIVPAPMPGNSCPPEVDAKL 325
Query: 214 LKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLK 263
LKR+ R++KNRE+A + RRKKKEY++ LE R+ + N+ L E L+
Sbjct: 326 LKRQQRMIKNRESACQSRRKKKEYLQGLEARLQAVLADNQQLRRENAALR 375
>gi|18702325 cAMP responsive element binding protein 3-like 4 [Homo
sapiens]
Length = 395
Score = 48.9 bits (115), Expect = 5e-06
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 12/95 (12%)
Query: 181 IRTTPSATSLP-QTVVMTSP---------VTLTSQT--TKTDDPQLKREIRLMKNREAAR 228
+ P T LP QT+ +T V+L S TK ++ LK+ R ++N+++A+
Sbjct: 173 VAPVPCTTLLPCQTLFLTDEEKRLLGQEGVSLPSHLPLTKAEERVLKKVRRKIRNKQSAQ 232
Query: 229 ECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLK 263
+ RR+KKEY+ LE+RVA QN+ L ++++ L+
Sbjct: 233 DSRRRKKEYIDGLESRVAACSAQNQELQKKVQELE 267
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.305 0.120 0.315
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,737,172
Number of Sequences: 37866
Number of extensions: 414264
Number of successful extensions: 2443
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 89
Number of HSP's successfully gapped in prelim test: 128
Number of HSP's that attempted gapping in prelim test: 2148
Number of HSP's gapped (non-prelim): 372
length of query: 271
length of database: 18,247,518
effective HSP length: 101
effective length of query: 170
effective length of database: 14,423,052
effective search space: 2451918840
effective search space used: 2451918840
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.