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Search of human proteins with 4885069
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4885069 ras homolog gene family, member E [Homo sapiens]
(244 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4885069 ras homolog gene family, member E [Homo sapiens] 493 e-140
gi|4885581 Rho family GTPase 2 [Homo sapiens] 308 4e-84
gi|7657514 GTP-binding protein RHO6 [Homo sapiens] 301 4e-82
gi|10835049 ras homolog gene family, member A [Homo sapiens] 198 3e-51
gi|111494251 ras homolog gene family, member C precursor [Homo s... 197 7e-51
gi|111494248 ras homolog gene family, member C precursor [Homo s... 197 7e-51
gi|28395033 ras homolog gene family, member C precursor [Homo sa... 197 7e-51
gi|4757764 ras homolog gene family, member B [Homo sapiens] 192 2e-49
gi|7656900 ras homolog D [Homo sapiens] 171 4e-43
gi|9845511 ras-related C3 botulinum toxin substrate 1 isoform Ra... 170 9e-43
gi|38016957 ras homolog gene family, member F [Homo sapiens] 169 2e-42
gi|46249393 ras homolog gene family, member G [Homo sapiens] 166 1e-41
gi|4826962 ras-related C3 botulinum toxin substrate 3 (rho famil... 164 5e-41
gi|50263042 ras-like protein TC10 [Homo sapiens] 164 7e-41
gi|4506381 ras-related C3 botulinum toxin substrate 2 [Homo sapi... 162 3e-40
gi|9845509 ras-related C3 botulinum toxin substrate 1 isoform Ra... 159 3e-39
gi|16357472 cell division cycle 42 isoform 2 [Homo sapiens] 154 7e-38
gi|89903012 cell division cycle 42 isoform 1 [Homo sapiens] 152 3e-37
gi|4757952 cell division cycle 42 isoform 1 [Homo sapiens] 152 3e-37
gi|16903164 ras homolog gene family, member J [Homo sapiens] 148 5e-36
gi|11034843 ras homolog gene family, member U [Homo sapiens] 147 1e-35
gi|229577148 ras homolog gene family, member V [Homo sapiens] 130 8e-31
gi|4757770 ras homolog gene family, member H [Homo sapiens] 128 4e-30
gi|28629866 Rho-related BTB domain containing 1 [Homo sapiens] 87 1e-17
gi|237649109 Rho-related BTB domain containing 2 isoform 1 [Homo... 85 7e-17
gi|237649113 Rho-related BTB domain containing 2 isoform 3 [Homo... 84 9e-17
gi|237649111 Rho-related BTB domain containing 2 isoform 2 [Homo... 84 9e-17
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens] 79 4e-15
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 79 5e-15
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 78 8e-15
>gi|4885069 ras homolog gene family, member E [Homo sapiens]
Length = 244
Score = 493 bits (1269), Expect = e-140
Identities = 244/244 (100%), Positives = 244/244 (100%)
Query: 1 MKERRASQKLSSKSIMDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY 60
MKERRASQKLSSKSIMDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY
Sbjct: 1 MKERRASQKLSSKSIMDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY 60
Query: 61 TASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE 120
TASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE
Sbjct: 61 TASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE 120
Query: 121 IQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSAL 180
IQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSAL
Sbjct: 121 IQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSAL 180
Query: 181 QSENSVRDIFHVATLACVNKTNKNVKRNKSQRATKRISHMPSRPELSAVATDLRKDKAKS 240
QSENSVRDIFHVATLACVNKTNKNVKRNKSQRATKRISHMPSRPELSAVATDLRKDKAKS
Sbjct: 181 QSENSVRDIFHVATLACVNKTNKNVKRNKSQRATKRISHMPSRPELSAVATDLRKDKAKS 240
Query: 241 CTVM 244
CTVM
Sbjct: 241 CTVM 244
>gi|4885581 Rho family GTPase 2 [Homo sapiens]
Length = 227
Score = 308 bits (788), Expect = 4e-84
Identities = 144/225 (64%), Positives = 185/225 (82%), Gaps = 1/225 (0%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Q+ +CKIVVVGD++CGKTALL VFAKD +P +YVPTVFENYTASFEID +RIEL++WDTS
Sbjct: 4 QSGRCKIVVVGDAECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRRIELNMWDTS 63
Query: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
GS YYDNVRPL+YPDSDAVLICFDISRPETLDSVLKKW+GE QEFCPN K++LVGCK D+
Sbjct: 64 GSSYYDNVRPLAYPDSDAVLICFDISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDM 123
Query: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 199
RTD++TL ELS R PV+++QG +AKQ+GA +Y+ECS+ SE SVRD+FHVAT+A +
Sbjct: 124 RTDLATLRELSKQRLIPVTHEQGTVLAKQVGAVSYVECSSRSSERSVRDVFHVATVASLG 183
Query: 200 KTNKNVKRNKSQRATKRISHMPSRPELSAVATDLRKDKAKSCTVM 244
+ ++ ++R S+R +R + + RP+ ++ KD+AKSC +M
Sbjct: 184 RGHRQLRRTDSRRGMQRSAQLSGRPDRGNEG-EIHKDRAKSCNLM 227
>gi|7657514 GTP-binding protein RHO6 [Homo sapiens]
Length = 232
Score = 301 bits (770), Expect = 4e-82
Identities = 142/244 (58%), Positives = 189/244 (77%), Gaps = 12/244 (4%)
Query: 1 MKERRASQKLSSKSIMDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY 60
MKERRA Q + ++ CK+V+VGD QCGKTA+L V AKDC+PE YVPTVFENY
Sbjct: 1 MKERRAPQPVVAR----------CKLVLVGDVQCGKTAMLQVLAKDCYPETYVPTVFENY 50
Query: 61 TASFEIDTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE 120
TA E + QR+ELSLWDTSGSPYYDNVRPL Y DSDAVL+CFDISRPET+DS LKKW+ E
Sbjct: 51 TACLETEEQRVELSLWDTSGSPYYDNVRPLCYSDSDAVLLCFDISRPETVDSALKKWRTE 110
Query: 121 IQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSAL 180
I ++CP+T++LL+GCK+DLRTD+STL+ELS+ +Q P+SY+QG +AKQ+GA Y+E SA
Sbjct: 111 ILDYCPSTRVLLIGCKTDLRTDLSTLMELSHQKQAPISYEQGCAIAKQLGAEIYLEGSAF 170
Query: 181 QSENSVRDIFHVATLACVNKTNKNVKRNKSQRATKRISHMPSRPELSAVATDLRKDKAKS 240
SE S+ IF A++ C+NK + +++ + +KR+ H+PSR EL +++ +K+KAKS
Sbjct: 171 TSEKSIHSIFRTASMLCLNKPSPLPQKSPVRSLSKRLLHLPSRSEL--ISSTFKKEKAKS 228
Query: 241 CTVM 244
C++M
Sbjct: 229 CSIM 232
>gi|10835049 ras homolog gene family, member A [Homo sapiens]
Length = 193
Score = 198 bits (504), Expect = 3e-51
Identities = 91/177 (51%), Positives = 131/177 (74%), Gaps = 1/177 (0%)
Query: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 81
++ K+V+VGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G
Sbjct: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63
Query: 82 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 141
YD +RPLSYPD+D +L+CF I P++L+++ +KW E++ FCPN ++LVG K DLR
Sbjct: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRN 123
Query: 142 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACV 198
D T EL+ +Q PV ++G +MA +IGA Y+ECSA ++++ VR++F +AT A +
Sbjct: 124 DEHTRRELAKMKQEPVKPEEGRDMANRIGAFGYMECSA-KTKDGVREVFEMATRAAL 179
>gi|111494251 ras homolog gene family, member C precursor [Homo
sapiens]
Length = 193
Score = 197 bits (501), Expect = 7e-51
Identities = 93/191 (48%), Positives = 135/191 (70%), Gaps = 6/191 (3%)
Query: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 81
++ K+V+VGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G
Sbjct: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQ 63
Query: 82 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 141
YD +RPLSYPD+D +L+CF I P++L+++ +KW E++ FCPN ++LVG K DLR
Sbjct: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQ 123
Query: 142 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKT 201
D T EL+ +Q PV ++G +MA +I A Y+ECSA +++ VR++F +AT +
Sbjct: 124 DEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSA-KTKEGVREVFEMAT-----RA 177
Query: 202 NKNVKRNKSQR 212
V++NK +R
Sbjct: 178 GLQVRKNKRRR 188
>gi|111494248 ras homolog gene family, member C precursor [Homo
sapiens]
Length = 193
Score = 197 bits (501), Expect = 7e-51
Identities = 93/191 (48%), Positives = 135/191 (70%), Gaps = 6/191 (3%)
Query: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 81
++ K+V+VGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G
Sbjct: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQ 63
Query: 82 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 141
YD +RPLSYPD+D +L+CF I P++L+++ +KW E++ FCPN ++LVG K DLR
Sbjct: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQ 123
Query: 142 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKT 201
D T EL+ +Q PV ++G +MA +I A Y+ECSA +++ VR++F +AT +
Sbjct: 124 DEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSA-KTKEGVREVFEMAT-----RA 177
Query: 202 NKNVKRNKSQR 212
V++NK +R
Sbjct: 178 GLQVRKNKRRR 188
>gi|28395033 ras homolog gene family, member C precursor [Homo
sapiens]
Length = 193
Score = 197 bits (501), Expect = 7e-51
Identities = 93/191 (48%), Positives = 135/191 (70%), Gaps = 6/191 (3%)
Query: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 81
++ K+V+VGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G
Sbjct: 4 IRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQ 63
Query: 82 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 141
YD +RPLSYPD+D +L+CF I P++L+++ +KW E++ FCPN ++LVG K DLR
Sbjct: 64 EDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQ 123
Query: 142 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKT 201
D T EL+ +Q PV ++G +MA +I A Y+ECSA +++ VR++F +AT +
Sbjct: 124 DEHTRRELAKMKQEPVRSEEGRDMANRISAFGYLECSA-KTKEGVREVFEMAT-----RA 177
Query: 202 NKNVKRNKSQR 212
V++NK +R
Sbjct: 178 GLQVRKNKRRR 188
>gi|4757764 ras homolog gene family, member B [Homo sapiens]
Length = 196
Score = 192 bits (489), Expect = 2e-49
Identities = 90/179 (50%), Positives = 126/179 (70%), Gaps = 1/179 (0%)
Query: 22 VKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGS 81
++ K+VVVGD CGKT LL VF+KD FPE YVPTVFENY A E+D +++EL+LWDT+G
Sbjct: 4 IRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQ 63
Query: 82 PYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRT 141
YD +RPLSYPD+D +L+CF + P++L+++ +KW E++ FCPN ++LV K DLR+
Sbjct: 64 EDYDRLRPLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRS 123
Query: 142 DVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 200
D EL+ +Q PV D G MA +I A Y+ECSA +++ VR++F AT A + K
Sbjct: 124 DEHVRTELARMKQEPVRTDDGRAMAVRIQAYDYLECSA-KTKEGVREVFETATRAALQK 181
>gi|7656900 ras homolog D [Homo sapiens]
Length = 210
Score = 171 bits (434), Expect = 4e-43
Identities = 77/187 (41%), Positives = 117/187 (62%), Gaps = 1/187 (0%)
Query: 25 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 84
K+V+VGD CGKT+LL VFA FPE+Y PTVFE Y + ++ + + L +WDT+G Y
Sbjct: 19 KVVLVGDGGCGKTSLLMVFADGAFPESYTPTVFERYMVNLQVKGKPVHLHIWDTAGQDDY 78
Query: 85 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 144
D +RPL YPD+ +L+CFD++ P + D++ +W E+ FC +++VGCK+DLR D S
Sbjct: 79 DRLRPLFYPDASVLLLCFDVTSPNSFDNIFNRWYPEVNHFCKKVPIIVVGCKTDLRKDKS 138
Query: 145 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKN 204
+ +L + PV+Y +G MA+ +GA Y+ECSA +N V +F A ++ +N
Sbjct: 139 LVNKLRRNGLEPVTYHRGQEMARSVGAVAYLECSARLHDN-VHAVFQEAAEVALSSRGRN 197
Query: 205 VKRNKSQ 211
R +Q
Sbjct: 198 FWRRITQ 204
>gi|9845511 ras-related C3 botulinum toxin substrate 1 isoform Rac1
[Homo sapiens]
Length = 192
Score = 170 bits (431), Expect = 9e-43
Identities = 82/177 (46%), Positives = 115/177 (64%), Gaps = 3/177 (1%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Q +KC VVVGD GKT LL + + FP Y+PTVF+NY+A+ +D + + L LWDT+
Sbjct: 2 QAIKC--VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA 59
Query: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
G YD +RPLSYP +D LICF + P + ++V KW E++ CPNT ++LVG K DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPNTPIILVGTKLDL 119
Query: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 196
R D T+ +L + TP++Y QG MAK+IGA Y+ECSAL ++ ++ +F A A
Sbjct: 120 RDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSAL-TQRGLKTVFDEAIRA 175
>gi|38016957 ras homolog gene family, member F [Homo sapiens]
Length = 211
Score = 169 bits (429), Expect = 2e-42
Identities = 85/188 (45%), Positives = 122/188 (64%), Gaps = 2/188 (1%)
Query: 25 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 84
KIV+VGD CGKT+LL V+++ FPE+Y P+VFE YTAS + ++ + L+L+DT+G Y
Sbjct: 21 KIVIVGDGGCGKTSLLMVYSQGSFPEHYAPSVFEKYTASVTVGSKEVTLNLYDTAGQEDY 80
Query: 85 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 144
D +RPLSY ++ VLIC+D+ P + D+VL KW E+ FC M+L+GCK+DLR D
Sbjct: 81 DRLRPLSYQNTHLVLICYDVMNPTSYDNVLIKWFPEVTHFCRGIPMVLIGCKTDLRKDKE 140
Query: 145 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKN 204
L +L + P++Y QG + +QI AA Y+ECSA EN V D+F A ++ K
Sbjct: 141 QLRKLRAAQLEPITYMQGLSACEQIRAALYLECSAKFREN-VEDVFREAAKVALSAL-KK 198
Query: 205 VKRNKSQR 212
+R K +R
Sbjct: 199 AQRQKKRR 206
>gi|46249393 ras homolog gene family, member G [Homo sapiens]
Length = 191
Score = 166 bits (421), Expect = 1e-41
Identities = 84/191 (43%), Positives = 120/191 (62%), Gaps = 5/191 (2%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Q++KC VVVGD GKT LL + + FP+ Y+PTVF+NY+A +D + + L+LWDT+
Sbjct: 2 QSIKC--VVVGDGAVGKTCLLICYTTNAFPKEYIPTVFDNYSAQSAVDGRTVNLNLWDTA 59
Query: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
G YD +R LSYP ++ +ICF I+ P + ++V KW E+ CP+ +LLVG K DL
Sbjct: 60 GQEEYDRLRTLSYPQTNVFVICFSIASPPSYENVRHKWHPEVCHHCPDVPILLVGTKKDL 119
Query: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 199
R TL L Q P++ QG +AKQI A Y+ECSALQ ++ V+++F A A +N
Sbjct: 120 RAQPDTLRRLKEQGQAPITPQQGQALAKQIHAVRYLECSALQ-QDGVKEVFAEAVRAVLN 178
Query: 200 KTNKNVKRNKS 210
T +KR +S
Sbjct: 179 PT--PIKRGRS 187
>gi|4826962 ras-related C3 botulinum toxin substrate 3 (rho family,
small GTP binding protein Rac3) [Homo sapiens]
Length = 192
Score = 164 bits (416), Expect = 5e-41
Identities = 79/177 (44%), Positives = 114/177 (64%), Gaps = 3/177 (1%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Q +KC VVVGD GKT LL + + FP Y+PTVF+NY+A+ +D + + L LWDT+
Sbjct: 2 QAIKC--VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA 59
Query: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
G YD +RPLSYP +D LICF + P + ++V KW E++ CP+T +LLVG K DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLICFSLVSPASFENVRAKWYPEVRHHCPHTPILLVGTKLDL 119
Query: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 196
R D T+ L + + P++Y QG MA++IG+ Y+ECSAL ++ ++ +F A A
Sbjct: 120 RDDKDTIERLRDKKLAPITYPQGLAMAREIGSVKYLECSAL-TQRGLKTVFDEAIRA 175
>gi|50263042 ras-like protein TC10 [Homo sapiens]
Length = 205
Score = 164 bits (415), Expect = 7e-41
Identities = 79/188 (42%), Positives = 116/188 (61%), Gaps = 1/188 (0%)
Query: 25 KIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSGSPYY 84
K VVVGD GKT LL +A D FPE YVPTVF++Y S + ++ L L+DT+G Y
Sbjct: 11 KCVVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVSVTVGGKQYLLGLYDTAGQEDY 70
Query: 85 DNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLRTDVS 144
D +RPLSYP +D LICF + P + +V ++W E++E+ PN LL+G + DLR D
Sbjct: 71 DRLRPLSYPMTDVFLICFSVVNPASFQNVKEEWVPELKEYAPNVPFLLIGTQIDLRDDPK 130
Query: 145 TLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNKTNKN 204
TL L++ ++ P+ +QG +AK+IGA Y+ECSAL ++ ++ +F A +A +
Sbjct: 131 TLARLNDMKEKPICVEQGQKLAKEIGACCYVECSAL-TQKGLKTVFDEAIIAILTPKKHT 189
Query: 205 VKRNKSQR 212
VK+ R
Sbjct: 190 VKKRIGSR 197
>gi|4506381 ras-related C3 botulinum toxin substrate 2 [Homo
sapiens]
Length = 192
Score = 162 bits (409), Expect = 3e-40
Identities = 77/177 (43%), Positives = 114/177 (64%), Gaps = 3/177 (1%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Q +KC VVVGD GKT LL + + FP Y+PTVF+NY+A+ +D++ + L LWDT+
Sbjct: 2 QAIKC--VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDSKPVNLGLWDTA 59
Query: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
G YD +RPLSYP +D LICF + P + ++V KW E++ CP+T ++LVG K DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLICFSLVSPASYENVRAKWFPEVRHHCPSTPIILVGTKLDL 119
Query: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 196
R D T+ +L + P++Y QG +AK+I + Y+ECSAL ++ ++ +F A A
Sbjct: 120 RDDKDTIEKLKEKKLAPITYPQGLALAKEIDSVKYLECSAL-TQRGLKTVFDEAIRA 175
>gi|9845509 ras-related C3 botulinum toxin substrate 1 isoform Rac1b
[Homo sapiens]
Length = 211
Score = 159 bits (401), Expect = 3e-39
Identities = 82/196 (41%), Positives = 115/196 (58%), Gaps = 22/196 (11%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Q +KC VVVGD GKT LL + + FP Y+PTVF+NY+A+ +D + + L LWDT+
Sbjct: 2 QAIKC--VVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLGLWDTA 59
Query: 80 GSPYYDNVRPLSYPDS-------------------DAVLICFDISRPETLDSVLKKWKGE 120
G YD +RPLSYP + D LICF + P + ++V KW E
Sbjct: 60 GQEDYDRLRPLSYPQTVGETYGKDITSRGKDKPIADVFLICFSLVSPASFENVRAKWYPE 119
Query: 121 IQEFCPNTKMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSAL 180
++ CPNT ++LVG K DLR D T+ +L + TP++Y QG MAK+IGA Y+ECSAL
Sbjct: 120 VRHHCPNTPIILVGTKLDLRDDKDTIEKLKEKKLTPITYPQGLAMAKEIGAVKYLECSAL 179
Query: 181 QSENSVRDIFHVATLA 196
++ ++ +F A A
Sbjct: 180 -TQRGLKTVFDEAIRA 194
>gi|16357472 cell division cycle 42 isoform 2 [Homo sapiens]
Length = 191
Score = 154 bits (389), Expect = 7e-38
Identities = 77/188 (40%), Positives = 113/188 (60%), Gaps = 3/188 (1%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Q +KC VVVGD GKT LL + + FP YVPTVF+NY + I + L L+DT+
Sbjct: 2 QTIKC--VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59
Query: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
G YD +RPLSYP +D L+CF + P + ++V +KW EI CP T LLVG + DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 119
Query: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVN 199
R D ST+ +L+ ++Q P++ + +A+ + A Y+ECSAL ++ ++++F A LA +
Sbjct: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSAL-TQRGLKNVFDEAILAALE 178
Query: 200 KTNKNVKR 207
KR
Sbjct: 179 PPETQPKR 186
>gi|89903012 cell division cycle 42 isoform 1 [Homo sapiens]
Length = 191
Score = 152 bits (384), Expect = 3e-37
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Q +KC VVVGD GKT LL + + FP YVPTVF+NY + I + L L+DT+
Sbjct: 2 QTIKC--VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59
Query: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
G YD +RPLSYP +D L+CF + P + ++V +KW EI CP T LLVG + DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 119
Query: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACV 198
R D ST+ +L+ ++Q P++ + +A+ + A Y+ECSAL ++ ++++F A LA +
Sbjct: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSAL-TQKGLKNVFDEAILAAL 177
>gi|4757952 cell division cycle 42 isoform 1 [Homo sapiens]
Length = 191
Score = 152 bits (384), Expect = 3e-37
Identities = 75/179 (41%), Positives = 111/179 (62%), Gaps = 3/179 (1%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
Q +KC VVVGD GKT LL + + FP YVPTVF+NY + I + L L+DT+
Sbjct: 2 QTIKC--VVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTA 59
Query: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
G YD +RPLSYP +D L+CF + P + ++V +KW EI CP T LLVG + DL
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCPKTPFLLVGTQIDL 119
Query: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACV 198
R D ST+ +L+ ++Q P++ + +A+ + A Y+ECSAL ++ ++++F A LA +
Sbjct: 120 RDDPSTIEKLAKNKQKPITPETAEKLARDLKAVKYVECSAL-TQKGLKNVFDEAILAAL 177
>gi|16903164 ras homolog gene family, member J [Homo sapiens]
Length = 214
Score = 148 bits (373), Expect = 5e-36
Identities = 74/187 (39%), Positives = 114/187 (60%), Gaps = 3/187 (1%)
Query: 17 DPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLW 76
D + +KC VVVGD GKT LL +A D FPE YVPTVF++Y + + ++ L L+
Sbjct: 17 DEKKMLKC--VVVGDGAVGKTCLLMSYANDAFPEEYVPTVFDHYAVTVTVGGKQHLLGLY 74
Query: 77 DTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCK 136
DT+G Y+ +RPLSYP++D LICF + P + +V ++W E+++ P+ +L+G +
Sbjct: 75 DTAGQEDYNQLRPLSYPNTDVFLICFSVVNPASYHNVQEEWVPELKDCMPHVPYVLIGTQ 134
Query: 137 SDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 196
DLR D TL L ++ P++Y+ G +AK IGA Y+ECSAL ++ ++ +F A L
Sbjct: 135 IDLRDDPKTLARLLYMKEKPLTYEHGVKLAKAIGAQCYLECSAL-TQKGLKAVFDEAILT 193
Query: 197 CVNKTNK 203
+ K
Sbjct: 194 IFHPKKK 200
>gi|11034843 ras homolog gene family, member U [Homo sapiens]
Length = 258
Score = 147 bits (370), Expect = 1e-35
Identities = 75/198 (37%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
Query: 20 QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTS 79
+ VKC V+VGD GKT+L+ + + +P Y+PT F+N++A +D + + L L DT+
Sbjct: 48 RGVKC--VLVGDGAVGKTSLVVSYTTNGYPTEYIPTAFDNFSAVVSVDGRPVRLQLCDTA 105
Query: 80 GSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDL 139
G +D +RPL Y ++D L+CF + P + +V +KW EI+ CP ++LVG +SDL
Sbjct: 106 GQDEFDKLRPLCYTNTDIFLLCFSVVSPSSFQNVSEKWVPEIRCHCPKAPIILVGTQSDL 165
Query: 140 RTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACV- 198
R DV L+EL ++ PV + A++I AA+YIECSAL +N ++++F A +A +
Sbjct: 166 REDVKVLIELDKCKEKPVPEEAAKLCAEEIKAASYIECSALTQKN-LKEVFDAAIVAGIQ 224
Query: 199 -NKTNKNVKRNKSQRATK 215
+ T + K++KS+ K
Sbjct: 225 YSDTQQQPKKSKSRTPDK 242
>gi|229577148 ras homolog gene family, member V [Homo sapiens]
Length = 236
Score = 130 bits (328), Expect = 8e-31
Identities = 64/182 (35%), Positives = 107/182 (58%), Gaps = 4/182 (2%)
Query: 18 PNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWD 77
P +KC V+VGD GK++L+ + + +P Y PT + ++ +D + + LWD
Sbjct: 28 PELGIKC--VLVGDGAVGKSSLIVSYTCNGYPARYRPTALDTFSVQVLVDGAPVRIELWD 85
Query: 78 TSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKS 137
T+G +D +R L YPD+D L CF + +P + ++ +KW EI+ P +LLVG ++
Sbjct: 86 TAGQEDFDRLRSLCYPDTDVFLACFSVVQPSSFQNITEKWLPEIRTHNPQAPVLLVGTQA 145
Query: 138 DLRTDVSTLVEL-SNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLA 196
DLR DV+ L++L R+ PV Q +A++I A Y+ECSAL +N ++++F A L+
Sbjct: 146 DLRDDVNVLIQLDQGGREGPVPQPQAQGLAEKIRACCYLECSALTQKN-LKEVFDSAILS 204
Query: 197 CV 198
+
Sbjct: 205 AI 206
>gi|4757770 ras homolog gene family, member H [Homo sapiens]
Length = 191
Score = 128 bits (322), Expect = 4e-30
Identities = 70/187 (37%), Positives = 109/187 (58%), Gaps = 10/187 (5%)
Query: 21 NVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTASFEIDTQRIELSLWDTSG 80
++KC V+VGDS GKT+LL F + FPE Y PTV+EN +D +I L LWDT+G
Sbjct: 4 SIKC--VLVGDSAVGKTSLLVRFTSETFPEAYKPTVYENTGVDVFMDGIQISLGLWDTAG 61
Query: 81 SPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLR 140
+ + ++RPLSY +D VL+C+ ++ + ++ KW GEI+ P T +L+V ++D R
Sbjct: 62 NDAFRSIRPLSYQQADVVLMCYSVANHNSFLNLKNKWIGEIRSNLPCTPVLVVATQTDQR 121
Query: 141 TDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACVNK 200
E+ HR + V+ +G +A+ + A Y+ECSAL S V+ +F A VN+
Sbjct: 122 -------EMGPHRASCVNAMEGKKLAQDVRAKGYLECSAL-SNRGVQQVFECAVRTAVNQ 173
Query: 201 TNKNVKR 207
+ +R
Sbjct: 174 ARRRNRR 180
>gi|28629866 Rho-related BTB domain containing 1 [Homo sapiens]
Length = 696
Score = 87.0 bits (214), Expect = 1e-17
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 31/232 (13%)
Query: 18 PN-QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENY------VPTVF--ENYTASFEI-- 66
PN + +KC VVVGD+ GKT L+ A + Y VPTV+ + Y E+
Sbjct: 10 PNVETIKC--VVVGDNAVGKTRLICARACNTTLTQYQLLATHVPTVWAIDQYRVCQEVLE 67
Query: 67 ------DTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE 120
D + L LWDT G + D R +Y SD V++CF I+ P +L+ V W E
Sbjct: 68 RSRDVVDEVSVSLRLWDTFGDHHKD--RRFAYGRSDVVVLCFSIANPNSLNHVKSMWYPE 125
Query: 121 IQEFCPNTKMLLVGCKSDLR-TDVSTLVELSNHRQTPVSY------DQGANMAKQIGAAT 173
I+ FCP T ++LVGC+ DLR D+ + P+ ++G +AK++G
Sbjct: 126 IKHFCPRTPVILVGCQLDLRYADLEAVNRARRPLARPIKRGDILPPEKGREVAKELG-LP 184
Query: 174 YIECSALQSENSVRDIF-HVATLACVNKTNKNVKRNKSQRATKRISHMPSRP 224
Y E S + ++D+F + A +++ + ++ ++ K + P P
Sbjct: 185 YYETSVF-DQFGIKDVFDNAIRAALISRRHLQFWKSHLKKVQKPLLQAPFLP 235
>gi|237649109 Rho-related BTB domain containing 2 isoform 1 [Homo
sapiens]
Length = 749
Score = 84.7 bits (208), Expect = 7e-17
Identities = 73/225 (32%), Positives = 108/225 (48%), Gaps = 40/225 (17%)
Query: 8 QKLSSKS---IMD-------PN-QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENY---- 52
QK SS S +MD PN + +KC VVVGD+ GKT L+ A + Y
Sbjct: 12 QKTSSDSMSRLMDSDMDYERPNVETIKC--VVVGDNAVGKTRLICARACNATLTQYQLLA 69
Query: 53 --VPTVF--ENYTASFEI--------DTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLI 100
VPTV+ + Y E+ D + L LWDT G + D R +Y SD V++
Sbjct: 70 THVPTVWAIDQYRVCQEVLERSRDVVDDVSVSLRLWDTFGDHHKD--RRFAYGRSDVVVL 127
Query: 101 CFDISRPETLDSVLKKWKGEIQEFCPNTKMLLVGCKSDLR-TDVSTLVELSNHRQTPVS- 158
CF I+ P +L V W EI+ FCP ++LVGC+ DLR D+ + P+
Sbjct: 128 CFSIANPNSLHHVKTMWYPEIKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKP 187
Query: 159 -----YDQGANMAKQIGAATYIECSALQSENSVRDIFHVATLACV 198
++G +AK++G Y E S + ++ ++D+F A A +
Sbjct: 188 NEILPPEKGREVAKELG-IPYYETSVV-AQFGIKDVFDNAIRAAL 230
>gi|237649113 Rho-related BTB domain containing 2 isoform 3 [Homo
sapiens]
Length = 727
Score = 84.3 bits (207), Expect = 9e-17
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 30/205 (14%)
Query: 18 PN-QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENY------VPTVF--ENYTASFEI-- 66
PN + +KC VVVGD+ GKT L+ A + Y VPTV+ + Y E+
Sbjct: 10 PNVETIKC--VVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLE 67
Query: 67 ------DTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE 120
D + L LWDT G + D R +Y SD V++CF I+ P +L V W E
Sbjct: 68 RSRDVVDDVSVSLRLWDTFGDHHKD--RRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPE 125
Query: 121 IQEFCPNTKMLLVGCKSDLR-TDVSTLVELSNHRQTPVS------YDQGANMAKQIGAAT 173
I+ FCP ++LVGC+ DLR D+ + P+ ++G +AK++G
Sbjct: 126 IKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELG-IP 184
Query: 174 YIECSALQSENSVRDIFHVATLACV 198
Y E S + ++ ++D+F A A +
Sbjct: 185 YYETSVV-AQFGIKDVFDNAIRAAL 208
>gi|237649111 Rho-related BTB domain containing 2 isoform 2 [Homo
sapiens]
Length = 734
Score = 84.3 bits (207), Expect = 9e-17
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 30/205 (14%)
Query: 18 PN-QNVKCKIVVVGDSQCGKTALLHVFAKDCFPENY------VPTVF--ENYTASFEI-- 66
PN + +KC VVVGD+ GKT L+ A + Y VPTV+ + Y E+
Sbjct: 17 PNVETIKC--VVVGDNAVGKTRLICARACNATLTQYQLLATHVPTVWAIDQYRVCQEVLE 74
Query: 67 ------DTQRIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGE 120
D + L LWDT G + D R +Y SD V++CF I+ P +L V W E
Sbjct: 75 RSRDVVDDVSVSLRLWDTFGDHHKD--RRFAYGRSDVVVLCFSIANPNSLHHVKTMWYPE 132
Query: 121 IQEFCPNTKMLLVGCKSDLR-TDVSTLVELSNHRQTPVS------YDQGANMAKQIGAAT 173
I+ FCP ++LVGC+ DLR D+ + P+ ++G +AK++G
Sbjct: 133 IKHFCPRAPVILVGCQLDLRYADLEAVNRARRPLARPIKPNEILPPEKGREVAKELG-IP 191
Query: 174 YIECSALQSENSVRDIFHVATLACV 198
Y E S + ++ ++D+F A A +
Sbjct: 192 YYETSVV-AQFGIKDVFDNAIRAAL 215
>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 79.0 bits (193), Expect = 4e-15
Identities = 48/182 (26%), Positives = 93/182 (51%), Gaps = 16/182 (8%)
Query: 11 SSKSIMDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENYTA-SFEIDTQ 69
SS D N + KI+++GDS GKT ++ F + E T+ ++T S +ID +
Sbjct: 5 SSARAADENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGK 64
Query: 70 RIELSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEF-CPNT 128
++++ +WDT+G + + Y + A +I +D++R T +S+ W EI+++ N
Sbjct: 65 KVKMQVWDTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESI-PHWIHEIEKYGAANV 123
Query: 129 KMLLVGCKSDLRTDVSTLVELSNHRQTPVSYDQGANMAKQIGAATYIECSALQSENSVRD 188
++L+G K DL + V ++ +A++ G +E SA +S+N + +
Sbjct: 124 VIMLIGNKCDL------------WEKRHVLFEDACTLAEKYGLLAVLETSAKESKN-IEE 170
Query: 189 IF 190
+F
Sbjct: 171 VF 172
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 78.6 bits (192), Expect = 5e-15
Identities = 46/149 (30%), Positives = 82/149 (55%), Gaps = 7/149 (4%)
Query: 14 SIMDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIE 72
S M+P + K++++GDS GK+ LL FA D + E+Y+ T+ ++ + E+D + I+
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 73 LSLWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-PNTKML 131
L +WDT+G + + Y + +++ +D++ E+ ++V K+W EI + N L
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KQWLQEIDRYASENVNKL 120
Query: 132 LVGCKSDLRT----DVSTLVELSNHRQTP 156
LVG K DL T D +T E ++ P
Sbjct: 121 LVGNKCDLTTKKVVDYTTAKEFADSLGIP 149
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 77.8 bits (190), Expect = 8e-15
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 16 MDPNQNVKCKIVVVGDSQCGKTALLHVFAKDCFPENYVPTVFENY-TASFEIDTQRIELS 74
M+P + K++++GDS GK+ LL FA D + E+Y+ T+ ++ + E+D + I+L
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 75 LWDTSGSPYYDNVRPLSYPDSDAVLICFDISRPETLDSVLKKWKGEIQEFC-PNTKMLLV 133
+WDT+G + + Y + +++ +D++ E+ +V K+W EI + N LLV
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANV-KQWLQEIDRYASENVNKLLV 119
Query: 134 GCKSDLRT 141
G KSDL T
Sbjct: 120 GNKSDLTT 127
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.129 0.376
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,433,427
Number of Sequences: 37866
Number of extensions: 330371
Number of successful extensions: 1125
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 171
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 829
Number of HSP's gapped (non-prelim): 214
length of query: 244
length of database: 18,247,518
effective HSP length: 99
effective length of query: 145
effective length of database: 14,498,784
effective search space: 2102323680
effective search space used: 2102323680
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.