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Search of human proteins with 13376243
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|13376243 chromosome 10 open reading frame 119 [Homo sapiens]
(642 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|13376243 chromosome 10 open reading frame 119 [Homo sapiens] 1311 0.0
gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens] 32 1.8
gi|183396780 ubiquitin specific protease 20 [Homo sapiens] 32 2.4
gi|183397136 ubiquitin specific protease 20 [Homo sapiens] 32 2.4
gi|183397134 ubiquitin specific protease 20 [Homo sapiens] 32 2.4
gi|31077207 hepatocyte nuclear factor 4 alpha isoform a [Homo sa... 31 3.1
gi|31077205 hepatocyte nuclear factor 4 alpha isoform b [Homo sa... 31 3.1
gi|71725341 hepatocyte nuclear factor 4 alpha isoform e [Homo sa... 31 3.1
gi|71725339 hepatocyte nuclear factor 4 alpha isoform d [Homo sa... 31 3.1
gi|157412249 RUN and SH3 domain containing 1 isoform c [Homo sap... 31 3.1
gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo sap... 31 3.1
gi|42476123 RUN and SH3 domain containing 1 isoform d [Homo sapi... 31 3.1
gi|205277394 coenzyme A synthase isoform c [Homo sapiens] 31 3.1
gi|110227605 coenzyme A synthase isoform a [Homo sapiens] 31 3.1
gi|110227601 coenzyme A synthase isoform a [Homo sapiens] 31 3.1
gi|110227603 coenzyme A synthase isoform a [Homo sapiens] 31 3.1
gi|45439339 pyruvate dehyrogenase phosphatase catalytic subunit ... 30 5.3
gi|239985428 pyruvate dehyrogenase phosphatase catalytic subunit... 30 5.3
gi|239985426 pyruvate dehyrogenase phosphatase catalytic subunit... 30 5.3
gi|239985422 pyruvate dehyrogenase phosphatase catalytic subunit... 30 5.3
gi|239985420 pyruvate dehyrogenase phosphatase catalytic subunit... 30 5.3
gi|5032169 telomeric repeat binding factor 2 [Homo sapiens] 30 5.3
gi|5454048 semaphorin 3C [Homo sapiens] 30 5.3
gi|157168329 formin 1 [Homo sapiens] 30 6.9
gi|39930473 ligand dependent nuclear receptor corepressor [Homo ... 30 6.9
gi|31083174 interleukin 21 receptor precursor [Homo sapiens] 30 9.0
gi|40288197 GATA binding protein 6 [Homo sapiens] 30 9.0
gi|11141869 interleukin 21 receptor precursor [Homo sapiens] 30 9.0
gi|31083180 interleukin 21 receptor precursor [Homo sapiens] 30 9.0
>gi|13376243 chromosome 10 open reading frame 119 [Homo sapiens]
Length = 642
Score = 1311 bits (3392), Expect = 0.0
Identities = 642/642 (100%), Positives = 642/642 (100%)
Query: 1 MPCGEDWLSHPLGIVQGFFAQNGVNPDWEKKVIEYFKEKLKENNAPKWVPSLNEVPLHYL 60
MPCGEDWLSHPLGIVQGFFAQNGVNPDWEKKVIEYFKEKLKENNAPKWVPSLNEVPLHYL
Sbjct: 1 MPCGEDWLSHPLGIVQGFFAQNGVNPDWEKKVIEYFKEKLKENNAPKWVPSLNEVPLHYL 60
Query: 61 KPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKAHVLHFGKYRDVAECGPQQELDLNSPR 120
KPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKAHVLHFGKYRDVAECGPQQELDLNSPR
Sbjct: 61 KPNSFVKFRCMIQDMFDPEFYMGVYETVNQNTKAHVLHFGKYRDVAECGPQQELDLNSPR 120
Query: 121 NTTLERQTFYCVPVPGESTWVKEAYVNANQARVSPSTSYTPSRHKRSYEDDDDMDLQPNK 180
NTTLERQTFYCVPVPGESTWVKEAYVNANQARVSPSTSYTPSRHKRSYEDDDDMDLQPNK
Sbjct: 121 NTTLERQTFYCVPVPGESTWVKEAYVNANQARVSPSTSYTPSRHKRSYEDDDDMDLQPNK 180
Query: 181 QKDQHAGARQAGSVGGLQWCGEPKRLETEASTGQQLNSLNLSSPFDLNFPLPGEKGPACL 240
QKDQHAGARQAGSVGGLQWCGEPKRLETEASTGQQLNSLNLSSPFDLNFPLPGEKGPACL
Sbjct: 181 QKDQHAGARQAGSVGGLQWCGEPKRLETEASTGQQLNSLNLSSPFDLNFPLPGEKGPACL 240
Query: 241 VKVYEDWDCFKVNDILELYGILSVDPVLSILNNDERDASALLDPMECTDTAEEQRVHSPP 300
VKVYEDWDCFKVNDILELYGILSVDPVLSILNNDERDASALLDPMECTDTAEEQRVHSPP
Sbjct: 241 VKVYEDWDCFKVNDILELYGILSVDPVLSILNNDERDASALLDPMECTDTAEEQRVHSPP 300
Query: 301 ASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRAELLGFLTHALL 360
ASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRAELLGFLTHALL
Sbjct: 301 ASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRAELLGFLTHALL 360
Query: 361 GDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRL 420
GDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRL
Sbjct: 361 GDSLAAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRL 420
Query: 421 QMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALS 480
QMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALS
Sbjct: 421 QMTIENMNHLKFIPHKDYTANRLVSGLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTALS 480
Query: 481 NLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNMEEYMNSLL 540
NLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNMEEYMNSLL
Sbjct: 481 NLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLLPADCQIHLQPQLIPPNMEEYMNSLL 540
Query: 541 SAVLPSVLNKFRIYLTLLRFLEYSISDEITKAVEDDFVEMRKNDPQSITADDLHQLLVVA 600
SAVLPSVLNKFRIYLTLLRFLEYSISDEITKAVEDDFVEMRKNDPQSITADDLHQLLVVA
Sbjct: 541 SAVLPSVLNKFRIYLTLLRFLEYSISDEITKAVEDDFVEMRKNDPQSITADDLHQLLVVA 600
Query: 601 RCLSLSAGQTTLSRERWLRAKQLESLRRTRLQQQKCVNGNEL 642
RCLSLSAGQTTLSRERWLRAKQLESLRRTRLQQQKCVNGNEL
Sbjct: 601 RCLSLSAGQTTLSRERWLRAKQLESLRRTRLQQQKCVNGNEL 642
>gi|239753784 PREDICTED: NK1 homeobox 1 [Homo sapiens]
Length = 814
Score = 32.0 bits (71), Expect = 1.8
Identities = 36/147 (24%), Positives = 51/147 (34%), Gaps = 14/147 (9%)
Query: 106 AECGPQQELDLNSPRNTTLERQTFYCV----------PVPGESTWVKEAYVNANQARVSP 155
A C P PR LER+ P G+ EA N S
Sbjct: 483 APCAPAPAASGRPPRAEELERRALAGAGGVGAAGAEPPNAGDPFKAGEAETNDTNGYSSG 542
Query: 156 STSYTPSRHKRSY---EDDDDMDLQPNKQKDQHAGARQAGSVG-GLQWCGEPKRLETEAS 211
++PS ++DDD D P + + A + G G G + G ET+AS
Sbjct: 543 GGGHSPSADSGDEVPDDEDDDEDEAPETEAARGAEEARGGGGGLGARGSGCQGAAETDAS 602
Query: 212 TGQQLNSLNLSSPFDLNFPLPGEKGPA 238
G ++ P + + PG G A
Sbjct: 603 PGATVDEAAAPGPRENSPVAPGPPGGA 629
>gi|183396780 ubiquitin specific protease 20 [Homo sapiens]
Length = 914
Score = 31.6 bits (70), Expect = 2.4
Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 18/183 (9%)
Query: 76 FDPEFYMGVYETVNQNTKAHVLHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVP 135
FD ++ V+ETV QN + +VL + K + A QQ + L + R +L R FY
Sbjct: 659 FDDQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLR--FYV---- 712
Query: 136 GESTWVKEAYVNANQARVSPSTSYTP----SRHKRSYEDDDDMDLQPNKQKDQHAGARQA 191
W+ + A ++ T HK Y DD + L N + +
Sbjct: 713 -SREWLNKFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGG 771
Query: 192 GSVGGLQWCGEPKRLETEASTGQQLNSLNLSSPFDLNFPLPGEKGPACL----VKVYEDW 247
+V L C + E + + + + LN E+ P + ++ + +W
Sbjct: 772 PAVNHLYVC---SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREW 828
Query: 248 DCF 250
+ F
Sbjct: 829 EAF 831
>gi|183397136 ubiquitin specific protease 20 [Homo sapiens]
Length = 914
Score = 31.6 bits (70), Expect = 2.4
Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 18/183 (9%)
Query: 76 FDPEFYMGVYETVNQNTKAHVLHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVP 135
FD ++ V+ETV QN + +VL + K + A QQ + L + R +L R FY
Sbjct: 659 FDDQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLR--FYV---- 712
Query: 136 GESTWVKEAYVNANQARVSPSTSYTP----SRHKRSYEDDDDMDLQPNKQKDQHAGARQA 191
W+ + A ++ T HK Y DD + L N + +
Sbjct: 713 -SREWLNKFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGG 771
Query: 192 GSVGGLQWCGEPKRLETEASTGQQLNSLNLSSPFDLNFPLPGEKGPACL----VKVYEDW 247
+V L C + E + + + + LN E+ P + ++ + +W
Sbjct: 772 PAVNHLYVC---SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREW 828
Query: 248 DCF 250
+ F
Sbjct: 829 EAF 831
>gi|183397134 ubiquitin specific protease 20 [Homo sapiens]
Length = 914
Score = 31.6 bits (70), Expect = 2.4
Identities = 40/183 (21%), Positives = 70/183 (38%), Gaps = 18/183 (9%)
Query: 76 FDPEFYMGVYETVNQNTKAHVLHFGKYRDVAECGPQQELDLNSPRNTTLERQTFYCVPVP 135
FD ++ V+ETV QN + +VL + K + A QQ + L + R +L R FY
Sbjct: 659 FDDQYVTEVHETVVQNAEGYVLFYRKSSEEAMRERQQVVSLAAMREPSLLR--FYV---- 712
Query: 136 GESTWVKEAYVNANQARVSPSTSYTP----SRHKRSYEDDDDMDLQPNKQKDQHAGARQA 191
W+ + A ++ T HK Y DD + L N + +
Sbjct: 713 -SREWLNKFNTFAEPGPITNQTFLCSHGGIPPHKYHYIDDLVVILPQNVWEHLYNRFGGG 771
Query: 192 GSVGGLQWCGEPKRLETEASTGQQLNSLNLSSPFDLNFPLPGEKGPACL----VKVYEDW 247
+V L C + E + + + + LN E+ P + ++ + +W
Sbjct: 772 PAVNHLYVC---SICQVEIEALAKRRRIEIDTFIKLNKAFQAEESPGVIYCISMQWFREW 828
Query: 248 DCF 250
+ F
Sbjct: 829 EAF 831
>gi|31077207 hepatocyte nuclear factor 4 alpha isoform a [Homo
sapiens]
Length = 464
Score = 31.2 bits (69), Expect = 3.1
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 25/200 (12%)
Query: 365 AAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTI 424
A E+L+L +DVL LG + CP + + RI+ LV LQ+
Sbjct: 224 AGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDD 283
Query: 425 ENMNHLKFIPHKDYTANRLVS-GLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTAL---- 479
+LK I D A L G ++ + V E + Q D+ G L
Sbjct: 284 NEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPT 343
Query: 480 SNLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLL--------PADCQIHLQPQLIPPN 531
ITWQ ++ Q++F I +F ++ +LL P+D H L P
Sbjct: 344 LQSITWQMIE------QIQF---IKLFGMAKIDNLLQEMLLGGSPSDAP-HAHHPLHPHL 393
Query: 532 MEEYM--NSLLSAVLPSVLN 549
M+E+M N +++ +P+ L+
Sbjct: 394 MQEHMGTNVIVANTMPTHLS 413
>gi|31077205 hepatocyte nuclear factor 4 alpha isoform b [Homo
sapiens]
Length = 474
Score = 31.2 bits (69), Expect = 3.1
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 25/200 (12%)
Query: 365 AAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTI 424
A E+L+L +DVL LG + CP + + RI+ LV LQ+
Sbjct: 224 AGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDD 283
Query: 425 ENMNHLKFIPHKDYTANRLVS-GLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTAL---- 479
+LK I D A L G ++ + V E + Q D+ G L
Sbjct: 284 NEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPT 343
Query: 480 SNLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLL--------PADCQIHLQPQLIPPN 531
ITWQ ++ Q++F I +F ++ +LL P+D H L P
Sbjct: 344 LQSITWQMIE------QIQF---IKLFGMAKIDNLLQEMLLGGSPSDAP-HAHHPLHPHL 393
Query: 532 MEEYM--NSLLSAVLPSVLN 549
M+E+M N +++ +P+ L+
Sbjct: 394 MQEHMGTNVIVANTMPTHLS 413
>gi|71725341 hepatocyte nuclear factor 4 alpha isoform e [Homo
sapiens]
Length = 442
Score = 31.2 bits (69), Expect = 3.1
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 25/200 (12%)
Query: 365 AAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTI 424
A E+L+L +DVL LG + CP + + RI+ LV LQ+
Sbjct: 202 AGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDD 261
Query: 425 ENMNHLKFIPHKDYTANRLVS-GLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTAL---- 479
+LK I D A L G ++ + V E + Q D+ G L
Sbjct: 262 NEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPT 321
Query: 480 SNLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLL--------PADCQIHLQPQLIPPN 531
ITWQ ++ Q++F I +F ++ +LL P+D H L P
Sbjct: 322 LQSITWQMIE------QIQF---IKLFGMAKIDNLLQEMLLGGSPSDAP-HAHHPLHPHL 371
Query: 532 MEEYM--NSLLSAVLPSVLN 549
M+E+M N +++ +P+ L+
Sbjct: 372 MQEHMGTNVIVANTMPTHLS 391
>gi|71725339 hepatocyte nuclear factor 4 alpha isoform d [Homo
sapiens]
Length = 452
Score = 31.2 bits (69), Expect = 3.1
Identities = 51/200 (25%), Positives = 82/200 (41%), Gaps = 25/200 (12%)
Query: 365 AAEYLILHLISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTI 424
A E+L+L +DVL LG + CP + + RI+ LV LQ+
Sbjct: 202 AGEHLLLGATKRSMVFKDVLLLGNDYIVPRHCPELAEMSRVSIRILDELVLPFQELQIDD 261
Query: 425 ENMNHLKFIPHKDYTANRLVS-GLLQLPSNTSLVIDETLLEQGQLDTPGVHNVTAL---- 479
+LK I D A L G ++ + V E + Q D+ G L
Sbjct: 262 NEYAYLKAIIFFDPDAKGLSDPGKIKRLRSQVQVSLEDYINDRQYDSRGRFGELLLLLPT 321
Query: 480 SNLITWQKVDYDFSYHQMEFPCNINVFITSEGRSLL--------PADCQIHLQPQLIPPN 531
ITWQ ++ Q++F I +F ++ +LL P+D H L P
Sbjct: 322 LQSITWQMIE------QIQF---IKLFGMAKIDNLLQEMLLGGSPSDAP-HAHHPLHPHL 371
Query: 532 MEEYM--NSLLSAVLPSVLN 549
M+E+M N +++ +P+ L+
Sbjct: 372 MQEHMGTNVIVANTMPTHLS 391
>gi|157412249 RUN and SH3 domain containing 1 isoform c [Homo
sapiens]
Length = 492
Score = 31.2 bits (69), Expect = 3.1
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 373 LISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTIENMNHLKF 432
L+S +Y LP G F++ GCP ST L ++Q L +F L + E+ +HL
Sbjct: 212 LLSLLY-----LPTGFFSLARGGCPSLST---ELLLLLQPLSVLTFHLDLLFEHHHHLPL 263
Query: 433 IP 434
P
Sbjct: 264 GP 265
>gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo
sapiens]
Length = 902
Score = 31.2 bits (69), Expect = 3.1
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 373 LISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTIENMNHLKF 432
L+S +Y LP G F++ GCP ST L ++Q L +F L + E+ +HL
Sbjct: 622 LLSLLY-----LPTGFFSLARGGCPSLST---ELLLLLQPLSVLTFHLDLLFEHHHHLPL 673
Query: 433 IP 434
P
Sbjct: 674 GP 675
>gi|42476123 RUN and SH3 domain containing 1 isoform d [Homo
sapiens]
Length = 433
Score = 31.2 bits (69), Expect = 3.1
Identities = 21/62 (33%), Positives = 31/62 (50%), Gaps = 8/62 (12%)
Query: 373 LISTVYTRRDVLPLGKFTVNLSGCPRNSTFTEHLYRIIQHLVPASFRLQMTIENMNHLKF 432
L+S +Y LP G F++ GCP ST L ++Q L +F L + E+ +HL
Sbjct: 153 LLSLLY-----LPTGFFSLARGGCPSLST---ELLLLLQPLSVLTFHLDLLFEHHHHLPL 204
Query: 433 IP 434
P
Sbjct: 205 GP 206
>gi|205277394 coenzyme A synthase isoform c [Homo sapiens]
Length = 593
Score = 31.2 bits (69), Expect = 3.1
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 298 SPPASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRA--ELLGFL 355
+P ASL PR+ IL + +N L L S + SPV+A E+L F+
Sbjct: 42 TPLASLAPRLASILTSAARLVNHTLYVHLQPGMS----LEGPAQPQSSPVQATFEVLDFI 97
Query: 356 THALLGDSLAAEYLILHLISTVYTRRDVLP 385
TH G + + L++ + T+ LP
Sbjct: 98 THLYAGADVHRHLDVRILLTNIRTKSTFLP 127
>gi|110227605 coenzyme A synthase isoform a [Homo sapiens]
Length = 564
Score = 31.2 bits (69), Expect = 3.1
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 298 SPPASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRA--ELLGFL 355
+P ASL PR+ IL + +N L L S + SPV+A E+L F+
Sbjct: 13 TPLASLAPRLASILTSAARLVNHTLYVHLQPGMS----LEGPAQPQSSPVQATFEVLDFI 68
Query: 356 THALLGDSLAAEYLILHLISTVYTRRDVLP 385
TH G + + L++ + T+ LP
Sbjct: 69 THLYAGADVHRHLDVRILLTNIRTKSTFLP 98
>gi|110227601 coenzyme A synthase isoform a [Homo sapiens]
Length = 564
Score = 31.2 bits (69), Expect = 3.1
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 298 SPPASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRA--ELLGFL 355
+P ASL PR+ IL + +N L L S + SPV+A E+L F+
Sbjct: 13 TPLASLAPRLASILTSAARLVNHTLYVHLQPGMS----LEGPAQPQSSPVQATFEVLDFI 68
Query: 356 THALLGDSLAAEYLILHLISTVYTRRDVLP 385
TH G + + L++ + T+ LP
Sbjct: 69 THLYAGADVHRHLDVRILLTNIRTKSTFLP 98
>gi|110227603 coenzyme A synthase isoform a [Homo sapiens]
Length = 564
Score = 31.2 bits (69), Expect = 3.1
Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 6/90 (6%)
Query: 298 SPPASLVPRIHVILAQKLQHINPLLPACLNKEESKTCKFVSSFMSELSPVRA--ELLGFL 355
+P ASL PR+ IL + +N L L S + SPV+A E+L F+
Sbjct: 13 TPLASLAPRLASILTSAARLVNHTLYVHLQPGMS----LEGPAQPQSSPVQATFEVLDFI 68
Query: 356 THALLGDSLAAEYLILHLISTVYTRRDVLP 385
TH G + + L++ + T+ LP
Sbjct: 69 THLYAGADVHRHLDVRILLTNIRTKSTFLP 98
>gi|45439339 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 3 precursor [Homo sapiens]
Length = 537
Score = 30.4 bits (67), Expect = 5.3
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 12 LGIVQGFFAQNGVNPDW----EKKVIEYFKEKLKENNAPKWVPSLNEVPLHYLKPNSFVK 67
LG++ F A V W +K+VIE ++L +N K++P P +
Sbjct: 344 LGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTY 403
Query: 68 FRCMIQDMFDPEFYMGVYETVNQNTKAHVLHFGKY 102
R QD F G++ET+++ ++ G+Y
Sbjct: 404 HRLRPQDKFLVLATDGLWETMHRQDVVRIV--GEY 436
>gi|239985428 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 3 precursor [Homo sapiens]
Length = 537
Score = 30.4 bits (67), Expect = 5.3
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 12 LGIVQGFFAQNGVNPDW----EKKVIEYFKEKLKENNAPKWVPSLNEVPLHYLKPNSFVK 67
LG++ F A V W +K+VIE ++L +N K++P P +
Sbjct: 344 LGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTY 403
Query: 68 FRCMIQDMFDPEFYMGVYETVNQNTKAHVLHFGKY 102
R QD F G++ET+++ ++ G+Y
Sbjct: 404 HRLRPQDKFLVLATDGLWETMHRQDVVRIV--GEY 436
>gi|239985426 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 2 [Homo sapiens]
Length = 562
Score = 30.4 bits (67), Expect = 5.3
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 12 LGIVQGFFAQNGVNPDW----EKKVIEYFKEKLKENNAPKWVPSLNEVPLHYLKPNSFVK 67
LG++ F A V W +K+VIE ++L +N K++P P +
Sbjct: 369 LGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTY 428
Query: 68 FRCMIQDMFDPEFYMGVYETVNQNTKAHVLHFGKY 102
R QD F G++ET+++ ++ G+Y
Sbjct: 429 HRLRPQDKFLVLATDGLWETMHRQDVVRIV--GEY 461
>gi|239985422 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 2 [Homo sapiens]
Length = 562
Score = 30.4 bits (67), Expect = 5.3
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 12 LGIVQGFFAQNGVNPDW----EKKVIEYFKEKLKENNAPKWVPSLNEVPLHYLKPNSFVK 67
LG++ F A V W +K+VIE ++L +N K++P P +
Sbjct: 369 LGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTY 428
Query: 68 FRCMIQDMFDPEFYMGVYETVNQNTKAHVLHFGKY 102
R QD F G++ET+++ ++ G+Y
Sbjct: 429 HRLRPQDKFLVLATDGLWETMHRQDVVRIV--GEY 461
>gi|239985420 pyruvate dehyrogenase phosphatase catalytic subunit 1
isoform 1 [Homo sapiens]
Length = 596
Score = 30.4 bits (67), Expect = 5.3
Identities = 24/95 (25%), Positives = 42/95 (44%), Gaps = 6/95 (6%)
Query: 12 LGIVQGFFAQNGVNPDW----EKKVIEYFKEKLKENNAPKWVPSLNEVPLHYLKPNSFVK 67
LG++ F A V W +K+VIE ++L +N K++P P +
Sbjct: 403 LGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYHTPPYLTAEPEVTY 462
Query: 68 FRCMIQDMFDPEFYMGVYETVNQNTKAHVLHFGKY 102
R QD F G++ET+++ ++ G+Y
Sbjct: 463 HRLRPQDKFLVLATDGLWETMHRQDVVRIV--GEY 495
>gi|5032169 telomeric repeat binding factor 2 [Homo sapiens]
Length = 500
Score = 30.4 bits (67), Expect = 5.3
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 16/73 (21%)
Query: 181 QKDQHAGARQAGSVGGLQWCGEPKRL------------ETEASTG----QQLNSLNLSSP 224
+KD++ + A GG + + KR+ TE S G Q+ S S P
Sbjct: 332 RKDENESSAPADGEGGSELQPKNKRMTISRLVLEEDSQSTEPSAGLNSSQEAASAPPSKP 391
Query: 225 FDLNFPLPGEKGP 237
LN PLPGEK P
Sbjct: 392 TVLNQPLPGEKNP 404
>gi|5454048 semaphorin 3C [Homo sapiens]
Length = 751
Score = 30.4 bits (67), Expect = 5.3
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Query: 7 WLSHPLGIVQGFFAQNGVNPDWEKKVIEYFKEKLKENN 44
WLS P+ V +G +P+ + KV +FKEKL +NN
Sbjct: 217 WLSEPM-FVDAHVIPDGTDPN-DAKVYFFFKEKLTDNN 252
>gi|157168329 formin 1 [Homo sapiens]
Length = 1196
Score = 30.0 bits (66), Expect = 6.9
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 273 NDERDASALLDPMECTDTAEEQRVHSPPASLVP 305
ND +D A L PME + +++ + PPAS+ P
Sbjct: 622 NDHKDIHAALQPMEGMASNQQKALPPPPASIPP 654
>gi|39930473 ligand dependent nuclear receptor corepressor [Homo
sapiens]
Length = 433
Score = 30.0 bits (66), Expect = 6.9
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 9/64 (14%)
Query: 448 LQLPSNTSLVIDETLLEQGQLDTPGVHNVTALSN----LI-----TWQKVDYDFSYHQME 498
L++P SL I E LL + QL T + L N LI +W K Y+F+ +M+
Sbjct: 149 LKVPLARSLQISEELLSRNQLSTAASLGPSGLQNHGQHLILSREASWAKPHYEFNLSRMK 208
Query: 499 FPCN 502
F N
Sbjct: 209 FRGN 212
>gi|31083174 interleukin 21 receptor precursor [Homo sapiens]
Length = 538
Score = 29.6 bits (65), Expect = 9.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 12/55 (21%)
Query: 195 GGLQWCGEPKRLETEASTGQQLNSLNL------------SSPFDLNFPLPGEKGP 237
GGL W G +E+ G L L++ SSP + +F PG++GP
Sbjct: 461 GGLPWGGRSPGGVSESEAGSPLAGLDMDTFDSGFVGSDCSSPVECDFTSPGDEGP 515
>gi|40288197 GATA binding protein 6 [Homo sapiens]
Length = 595
Score = 29.6 bits (65), Expect = 9.0
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Query: 195 GGLQWCGEPKRLETEASTGQQLNSLNLSS----PFDLNF--PLPGEKGPACLVKVYED 246
GG CG P+ L+TEA+ G SL LSS PF PG GP + +ED
Sbjct: 55 GGASNCGTPQ-LDTEAAAGPPARSLLLSSYASHPFGAPHGPSAPGVAGPGGNLSSWED 111
>gi|11141869 interleukin 21 receptor precursor [Homo sapiens]
Length = 538
Score = 29.6 bits (65), Expect = 9.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 12/55 (21%)
Query: 195 GGLQWCGEPKRLETEASTGQQLNSLNL------------SSPFDLNFPLPGEKGP 237
GGL W G +E+ G L L++ SSP + +F PG++GP
Sbjct: 461 GGLPWGGRSPGGVSESEAGSPLAGLDMDTFDSGFVGSDCSSPVECDFTSPGDEGP 515
>gi|31083180 interleukin 21 receptor precursor [Homo sapiens]
Length = 538
Score = 29.6 bits (65), Expect = 9.0
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 12/55 (21%)
Query: 195 GGLQWCGEPKRLETEASTGQQLNSLNL------------SSPFDLNFPLPGEKGP 237
GGL W G +E+ G L L++ SSP + +F PG++GP
Sbjct: 461 GGLPWGGRSPGGVSESEAGSPLAGLDMDTFDSGFVGSDCSSPVECDFTSPGDEGP 515
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.135 0.407
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,621,962
Number of Sequences: 37866
Number of extensions: 1184396
Number of successful extensions: 2881
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 2871
Number of HSP's gapped (non-prelim): 31
length of query: 642
length of database: 18,247,518
effective HSP length: 109
effective length of query: 533
effective length of database: 14,120,124
effective search space: 7526026092
effective search space used: 7526026092
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.