Search of human proteins with 13375862

Search of human proteins with 13375862

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|13375862 SAP30-like isoform 1 [Homo sapiens]
         (183 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|13375862 SAP30-like isoform 1 [Homo sapiens]                       374   e-104
gi|197099936 SAP30-like isoform 2 [Homo sapiens]                      267   4e-72
gi|197099958 SAP30-like isoform 3 [Homo sapiens]                      255   1e-68
gi|4506783 Sin3A-associated protein, 30kDa [Homo sapiens]             248   2e-66
gi|54633315 deoxynucleotidyltransferase, terminal, interacting p...    33   0.18 
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]      31   0.68 
gi|27436957 membrane associated guanylate kinase, WW and PDZ dom...    30   1.2  
gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]    30   1.5  
gi|31543535 R3H domain containing 1 [Homo sapiens]                     29   2.0  
gi|20149640 dual oxidase 1 precursor [Homo sapiens]                    28   3.4  
gi|28872751 dual oxidase 1 precursor [Homo sapiens]                    28   3.4  
gi|132566532 dual oxidase 2 precursor [Homo sapiens]                   28   4.4  
gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]      28   4.4  
gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform...    28   5.7  
gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform...    28   5.7  
gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Hom...    28   5.7  
gi|8923243 palmdelphin [Homo sapiens]                                  27   7.5  
gi|4557603 gamma-aminobutyric acid A receptor, alpha 3 precursor...    27   9.8  
gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]         27   9.8  
gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]         27   9.8  
gi|91825557 kinesin light chain 3 [Homo sapiens]                       27   9.8  

>gi|13375862 SAP30-like isoform 1 [Homo sapiens]
          Length = 183

 Score =  374 bits (961), Expect = e-104
 Identities = 183/183 (100%), Positives = 183/183 (100%)

Query: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
           MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL
Sbjct: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60

Query: 61  KLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTDIPEVDLFQLQVNTLR 120
           KLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTDIPEVDLFQLQVNTLR
Sbjct: 61  KLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTDIPEVDLFQLQVNTLR 120

Query: 121 RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 180
           RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK
Sbjct: 121 RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 180

Query: 181 QLE 183
           QLE
Sbjct: 181 QLE 183


>gi|197099936 SAP30-like isoform 2 [Homo sapiens]
          Length = 142

 Score =  267 bits (682), Expect = 4e-72
 Identities = 142/183 (77%), Positives = 142/183 (77%), Gaps = 41/183 (22%)

Query: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
           MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL
Sbjct: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60

Query: 61  KLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTDIPEVDLFQLQVNTLR 120
           KLDIDKSV                                         DLFQLQVNTLR
Sbjct: 61  KLDIDKSV-----------------------------------------DLFQLQVNTLR 79

Query: 121 RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 180
           RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK
Sbjct: 80  RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 139

Query: 181 QLE 183
           QLE
Sbjct: 140 QLE 142


>gi|197099958 SAP30-like isoform 3 [Homo sapiens]
          Length = 137

 Score =  255 bits (652), Expect = 1e-68
 Identities = 137/183 (74%), Positives = 137/183 (74%), Gaps = 46/183 (25%)

Query: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60
           MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL
Sbjct: 1   MNGFSTEEDSREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKL 60

Query: 61  KLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTDIPEVDLFQLQVNTLR 120
           KLDIDKS                                              LQVNTLR
Sbjct: 61  KLDIDKS----------------------------------------------LQVNTLR 74

Query: 121 RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 180
           RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK
Sbjct: 75  RYKRHYKLQTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGGK 134

Query: 181 QLE 183
           QLE
Sbjct: 135 QLE 137


>gi|4506783 Sin3A-associated protein, 30kDa [Homo sapiens]
          Length = 220

 Score =  248 bits (633), Expect = 2e-66
 Identities = 123/171 (71%), Positives = 139/171 (81%), Gaps = 4/171 (2%)

Query: 10  SREGPPAAPAAAAPGYGQSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDKSVR 69
           S  GPP A   A PG GQ CCL EDGERC R AGNASFSKR+QKSISQKK+K+++DKS R
Sbjct: 51  SAAGPPGA---AGPGPGQLCCLREDGERCGRAAGNASFSKRIQKSISQKKVKIELDKSAR 107

Query: 70  HLYICDFHKNFIQSVRNKRKRKTS-DDGGDSPEHDTDIPEVDLFQLQVNTLRRYKRHYKL 128
           HLYICD+HKN IQSVRN+RKRK S DDGGDSP  D D PEVDL+QLQVNTLRRYKRH+KL
Sbjct: 108 HLYICDYHKNLIQSVRNRRKRKGSDDDGGDSPVQDIDTPEVDLYQLQVNTLRRYKRHFKL 167

Query: 129 QTRPGFNKAQLAETVSRHFRNIPVNEKETLAYFIYMVKSNKSRLDQKSEGG 179
            TRPG NKAQL E V  HFR+IPVNEK+TL YFIY VK++K++ D K + G
Sbjct: 168 PTRPGLNKAQLVEIVGCHFRSIPVNEKDTLTYFIYSVKNDKNKSDLKVDSG 218


>gi|54633315 deoxynucleotidyltransferase, terminal, interacting
           protein 2 [Homo sapiens]
          Length = 756

 Score = 32.7 bits (73), Expect = 0.18
 Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 18/103 (17%)

Query: 48  SKRVQKSISQKKLKLDIDKSVRHLYICDFHKNF-----------IQSVRNKRKRKTSDDG 96
           +KR    I +KK    + K+V      DF KN            +Q  R K ++KT+ DG
Sbjct: 588 NKRTLTQIKEKKKNELLQKAV---ITPDFEKNHCVPPYSESKYQLQKKRRKERQKTAGDG 644

Query: 97  G---DSPEHDTDIPEVDLFQLQVNTLRRYKRHYKLQTRPGFNK 136
                +PE   ++   DL  L++      KR YK   R GF K
Sbjct: 645 WFGMKAPEMTNELKN-DLKALKMRASMDPKRFYKKNDRDGFPK 686


>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
          Length = 1178

 Score = 30.8 bits (68), Expect = 0.68
 Identities = 17/40 (42%), Positives = 21/40 (52%)

Query: 27  QSCCLIEDGERCVRPAGNASFSKRVQKSISQKKLKLDIDK 66
           QSC  I+  E CV  A   S  KR   SI++KK K   +K
Sbjct: 545 QSCTTIQHPEHCVTSADQHSAEKRSLSSINKKKGKPQTEK 584


>gi|27436957 membrane associated guanylate kinase, WW and PDZ domain
            containing 2 [Homo sapiens]
          Length = 1455

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query: 11   REGPPAAPAAAAPGYGQSCCLIEDGERCVR 40
            REGP AAPA A PG G S  L  +G    R
Sbjct: 1380 REGPGAAPAFAGPGGGGSGALEAEGRAGAR 1409


>gi|71274144 AT hook, DNA binding motif, containing 1 [Homo sapiens]
          Length = 1603

 Score = 29.6 bits (65), Expect = 1.5
 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 2/22 (9%)

Query: 13   GPPAAPAAAAPGYGQSCCLIED 34
            GPP  PAAAA GYG  C L+ D
Sbjct: 1526 GPPRGPAAAAAGYG--CPLLSD 1545


>gi|31543535 R3H domain containing 1 [Homo sapiens]
          Length = 1099

 Score = 29.3 bits (64), Expect = 2.0
 Identities = 36/132 (27%), Positives = 47/132 (35%), Gaps = 45/132 (34%)

Query: 31  LIEDGERCV-------RPAGNASFSKRVQKSISQKKLKLDIDKSVRHLYICD-------- 75
           L+E  E C+       RP    SF +  ++S S  KLKL     VR L +C+        
Sbjct: 42  LVEKNEHCIENNIDLQRPL--QSFGQTGKRSKSSSKLKL-----VRSLAVCEESPPPPAP 94

Query: 76  -----------------FHKNFIQSVRNKRKRKTSDD------GGDSPEHDTDIPEVDLF 112
                            F K    S     K K SD         DS +  TD   +DL 
Sbjct: 95  EISQENQEKIQIQLTQSFEKEEKPSKDEAEKEKASDKLPRKMLSRDSSQEYTDSTGIDLH 154

Query: 113 QLQVNTLRRYKR 124
           +  VNTL+   R
Sbjct: 155 EFLVNTLKNNPR 166


>gi|20149640 dual oxidase 1 precursor [Homo sapiens]
          Length = 1551

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 135 NKAQLAETVSRHFRNIPVNEKETLAY--FIYMVKSNKSRL 172
           +KAQLAE V   FR     +KE L +  F +M++ + S L
Sbjct: 892 SKAQLAEVVESMFRESGFQDKEELTWEDFHFMLRDHNSEL 931


>gi|28872751 dual oxidase 1 precursor [Homo sapiens]
          Length = 1551

 Score = 28.5 bits (62), Expect = 3.4
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 135 NKAQLAETVSRHFRNIPVNEKETLAY--FIYMVKSNKSRL 172
           +KAQLAE V   FR     +KE L +  F +M++ + S L
Sbjct: 892 SKAQLAEVVESMFRESGFQDKEELTWEDFHFMLRDHNSEL 931


>gi|132566532 dual oxidase 2 precursor [Homo sapiens]
          Length = 1548

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 2/40 (5%)

Query: 135 NKAQLAETVSRHFRNIPVNEKETLAY--FIYMVKSNKSRL 172
           +KAQLAE V   FR     +KE L +  F +M++ + S L
Sbjct: 896 SKAQLAEVVESMFRESGFQDKEELTWEDFHFMLRDHDSEL 935


>gi|148886752 immunoglobulin superfamily, member 9B [Homo sapiens]
          Length = 1349

 Score = 28.1 bits (61), Expect = 4.4
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)

Query: 3    GFSTEEDSREGPPAAPAAAAPG-----YGQSCCLIEDGERCVRP 41
            GF+T       PP  PA A PG     +GQ+      GE  +RP
Sbjct: 1274 GFTTLATGYPSPPPGPAPAGPGDSLDVFGQTPSPRRTGEELLRP 1317


>gi|45446740 ATP-binding cassette, sub-family A, member 2 isoform a
            [Homo sapiens]
          Length = 2436

 Score = 27.7 bits (60), Expect = 5.7
 Identities = 11/41 (26%), Positives = 26/41 (63%)

Query: 53   KSISQKKLKLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTS 93
            KS++Q++++ ++DK +  L + +   + +Q++    KRK S
Sbjct: 1093 KSMAQEEIRREMDKMIEDLELSNKRHSLVQTLSGGMKRKLS 1133


>gi|47078218 ATP-binding cassette, sub-family A, member 2 isoform b
            [Homo sapiens]
          Length = 2466

 Score = 27.7 bits (60), Expect = 5.7
 Identities = 11/41 (26%), Positives = 26/41 (63%)

Query: 53   KSISQKKLKLDIDKSVRHLYICDFHKNFIQSVRNKRKRKTS 93
            KS++Q++++ ++DK +  L + +   + +Q++    KRK S
Sbjct: 1123 KSMAQEEIRREMDKMIEDLELSNKRHSLVQTLSGGMKRKLS 1163


>gi|21361458 Rho guanine nucleotide exchange factor (GEF) 17 [Homo
           sapiens]
          Length = 2063

 Score = 27.7 bits (60), Expect = 5.7
 Identities = 10/21 (47%), Positives = 13/21 (61%)

Query: 5   STEEDSREGPPAAPAAAAPGY 25
           S+ E+  EGPP  P A +P Y
Sbjct: 249 SSSEEEEEGPPQLPGAQSPAY 269


>gi|8923243 palmdelphin [Homo sapiens]
          Length = 551

 Score = 27.3 bits (59), Expect = 7.5
 Identities = 16/86 (18%), Positives = 42/86 (48%), Gaps = 4/86 (4%)

Query: 49  KRVQKSISQKKLKLDIDKSVRHLYI---CDFHKNFIQSVRNKRKRKTSDDGGDSPEHDTD 105
           +++Q+ ISQK+LK++ DK ++H ++       K  +  + + ++++         +H   
Sbjct: 18  RKIQEEISQKRLKIEEDK-LKHQHLKKKALREKWLLDGISSGKEQEEMKKQNQQDQHQIQ 76

Query: 106 IPEVDLFQLQVNTLRRYKRHYKLQTR 131
           + E  + +L+       K   ++ T+
Sbjct: 77  VLEQSILRLEKEIQDLEKAELQISTK 102


>gi|4557603 gamma-aminobutyric acid A receptor, alpha 3 precursor
           [Homo sapiens]
          Length = 492

 Score = 26.9 bits (58), Expect = 9.8
 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 2/46 (4%)

Query: 94  DDGGDSPEHDTDIPE--VDLFQLQVNTLRRYKRHYKLQTRPGFNKA 137
           D GG SP+H  DIP+   D   +    L R    Y  + RPG   A
Sbjct: 44  DIGGLSPKHAPDIPDDSTDNITIFTRILDRLLDGYDNRLRPGLGDA 89


>gi|22538387 A-kinase anchor protein 9 isoform 2 [Homo sapiens]
          Length = 3907

 Score = 26.9 bits (58), Expect = 9.8
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 83  SVRNKRKRKTSDDGGD-SPEHDTDIPEVDLFQLQVNTLRR 121
           S + K+KRKTS    D S  HD +I +    ++ +N+ +R
Sbjct: 33  SKKQKKKRKTSSSKHDVSAHHDLNIDQSQCNEMYINSSQR 72


>gi|22538393 A-kinase anchor protein 9 isoform 3 [Homo sapiens]
          Length = 3899

 Score = 26.9 bits (58), Expect = 9.8
 Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 1/40 (2%)

Query: 83  SVRNKRKRKTSDDGGD-SPEHDTDIPEVDLFQLQVNTLRR 121
           S + K+KRKTS    D S  HD +I +    ++ +N+ +R
Sbjct: 33  SKKQKKKRKTSSSKHDVSAHHDLNIDQSQCNEMYINSSQR 72


>gi|91825557 kinesin light chain 3 [Homo sapiens]
          Length = 504

 Score = 26.9 bits (58), Expect = 9.8
 Identities = 12/19 (63%), Positives = 15/19 (78%)

Query: 4   FSTEEDSREGPPAAPAAAA 22
           F +EE+ R+GP AA AAAA
Sbjct: 178 FPSEEEERKGPEAAGAAAA 196


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.384 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,537,839
Number of Sequences: 37866
Number of extensions: 329681
Number of successful extensions: 1241
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1224
Number of HSP's gapped (non-prelim): 25
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.