Search of human proteins with 4826742

Search of human proteins with 4826742

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4826742 glutamine-fructose-6-phosphate transaminase 2 [Homo
sapiens]
         (682 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4826742 glutamine-fructose-6-phosphate transaminase 2 [Homo s...  1345   0.0  
gi|205277386 glucosamine-fructose-6-phosphate aminotransferase [...  1098   0.0  
gi|29570798 phosphoribosyl pyrophosphate amidotransferase propro...    62   2e-09
gi|110349721 titin isoform novex-3 [Homo sapiens]                      32   1.9  
gi|110349719 titin isoform N2-A [Homo sapiens]                         32   1.9  
gi|110349717 titin isoform novex-2 [Homo sapiens]                      32   1.9  
gi|110349713 titin isoform novex-1 [Homo sapiens]                      32   1.9  
gi|110349715 titin isoform N2-B [Homo sapiens]                         32   1.9  
gi|5453726 leucine rich repeat (in FLII) interacting protein 2 i...    32   2.5  
gi|195947369 junction-mediating and regulatory protein [Homo sap...    31   3.3  
gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]                31   3.3  
gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax ...    31   4.3  
gi|88703041 sorting nexin 6 isoform b [Homo sapiens]                   30   9.6  
gi|88703043 sorting nexin 6 isoform a [Homo sapiens]                   30   9.6  

>gi|4826742 glutamine-fructose-6-phosphate transaminase 2 [Homo
           sapiens]
          Length = 682

 Score = 1345 bits (3480), Expect = 0.0
 Identities = 682/682 (100%), Positives = 682/682 (100%)

Query: 1   MCGIFAYMNYRVPRTRKEIFETLIKGLQRLEYRGYDSAGVAIDGNNHEVKERHIQLVKKR 60
           MCGIFAYMNYRVPRTRKEIFETLIKGLQRLEYRGYDSAGVAIDGNNHEVKERHIQLVKKR
Sbjct: 1   MCGIFAYMNYRVPRTRKEIFETLIKGLQRLEYRGYDSAGVAIDGNNHEVKERHIQLVKKR 60

Query: 61  GKVKALDEELYKQDSMDLKVEFETHFGIAHTRWATHGVPSAVNSHPQRSDKGNEFVVIHN 120
           GKVKALDEELYKQDSMDLKVEFETHFGIAHTRWATHGVPSAVNSHPQRSDKGNEFVVIHN
Sbjct: 61  GKVKALDEELYKQDSMDLKVEFETHFGIAHTRWATHGVPSAVNSHPQRSDKGNEFVVIHN 120

Query: 121 GIITNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFSTLVERVIQQLEG 180
           GIITNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFSTLVERVIQQLEG
Sbjct: 121 GIITNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFSTLVERVIQQLEG 180

Query: 181 AFALVFKSVHYPGEAVATRRGSPLLIGVRSKYKLSTEQIPILYRTCTLENVKNICKTRMK 240
           AFALVFKSVHYPGEAVATRRGSPLLIGVRSKYKLSTEQIPILYRTCTLENVKNICKTRMK
Sbjct: 181 AFALVFKSVHYPGEAVATRRGSPLLIGVRSKYKLSTEQIPILYRTCTLENVKNICKTRMK 240

Query: 241 RLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAVADGKLSIHRVKRSAS 300
           RLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAVADGKLSIHRVKRSAS
Sbjct: 241 RLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAVADGKLSIHRVKRSAS 300

Query: 301 DDPSRAIQTLQMELQQIMKGNFSAFMQKEIFEQPESVFNTMRGRVNFETNTVLLGGLKDH 360
           DDPSRAIQTLQMELQQIMKGNFSAFMQKEIFEQPESVFNTMRGRVNFETNTVLLGGLKDH
Sbjct: 301 DDPSRAIQTLQMELQQIMKGNFSAFMQKEIFEQPESVFNTMRGRVNFETNTVLLGGLKDH 360

Query: 361 LKEIRRCRRLIVIGCGTSYHAAVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFF 420
           LKEIRRCRRLIVIGCGTSYHAAVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFF
Sbjct: 361 LKEIRRCRRLIVIGCGTSYHAAVATRQVLEELTELPVMVELASDFLDRNTPVFRDDVCFF 420

Query: 421 ISQSGETADTLLALRYCKDRGALTVGVTNTVGSSISRETDCGVHINAGPEIGVASTKAYT 480
           ISQSGETADTLLALRYCKDRGALTVGVTNTVGSSISRETDCGVHINAGPEIGVASTKAYT
Sbjct: 421 ISQSGETADTLLALRYCKDRGALTVGVTNTVGSSISRETDCGVHINAGPEIGVASTKAYT 480

Query: 481 SQFISLVMFGLMMSEDRISLQNRRQEIIRGLRSLPELIKEVLSLEEKIHDLALELYTQRS 540
           SQFISLVMFGLMMSEDRISLQNRRQEIIRGLRSLPELIKEVLSLEEKIHDLALELYTQRS
Sbjct: 481 SQFISLVMFGLMMSEDRISLQNRRQEIIRGLRSLPELIKEVLSLEEKIHDLALELYTQRS 540

Query: 541 LLVMGRGYNYATCLEGALKIKEITYMHSEGILAGELKHGPLALIDKQMPVIMVIMKDPCF 600
           LLVMGRGYNYATCLEGALKIKEITYMHSEGILAGELKHGPLALIDKQMPVIMVIMKDPCF
Sbjct: 541 LLVMGRGYNYATCLEGALKIKEITYMHSEGILAGELKHGPLALIDKQMPVIMVIMKDPCF 600

Query: 601 AKCQNALQQVTARQGRPIILCSKDDTESSKFAYKTIELPHTVDCLQGILSVIPLQLLSFH 660
           AKCQNALQQVTARQGRPIILCSKDDTESSKFAYKTIELPHTVDCLQGILSVIPLQLLSFH
Sbjct: 601 AKCQNALQQVTARQGRPIILCSKDDTESSKFAYKTIELPHTVDCLQGILSVIPLQLLSFH 660

Query: 661 LAVLRGYDVDFPRNLAKSVTVE 682
           LAVLRGYDVDFPRNLAKSVTVE
Sbjct: 661 LAVLRGYDVDFPRNLAKSVTVE 682


>gi|205277386 glucosamine-fructose-6-phosphate aminotransferase
           [Homo sapiens]
          Length = 681

 Score = 1098 bits (2841), Expect = 0.0
 Identities = 542/685 (79%), Positives = 619/685 (90%), Gaps = 7/685 (1%)

Query: 1   MCGIFAYMNYRVPRTRKEIFETLIKGLQRLEYRGYDSAGVAIDGNNHEVKERH---IQLV 57
           MCGIFAY+NY VPRTR+EI ETLIKGLQRLEYRGYDSAGV  DG N +  E +   IQL+
Sbjct: 1   MCGIFAYLNYHVPRTRREILETLIKGLQRLEYRGYDSAGVGFDGGNDKDWEANACKIQLI 60

Query: 58  KKRGKVKALDEELYKQDSMDLKVEFETHFGIAHTRWATHGVPSAVNSHPQRSDKGNEFVV 117
           KK+GKVKALDEE++KQ  MDL +EF+ H GIAHTRWATHG PS VNSHPQRSDK NEF+V
Sbjct: 61  KKKGKVKALDEEVHKQQDMDLDIEFDVHLGIAHTRWATHGEPSPVNSHPQRSDKNNEFIV 120

Query: 118 IHNGIITNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFSTLVERVIQQ 177
           IHNGIITNYKDL+KFLESKGY+FESETDTETIAKL+KY++DNRE++D +F+TLVERVIQQ
Sbjct: 121 IHNGIITNYKDLKKFLESKGYDFESETDTETIAKLVKYMYDNRESQDTSFTTLVERVIQQ 180

Query: 178 LEGAFALVFKSVHYPGEAVATRRGSPLLIGVRSKYKLSTEQIPILYRTCTLENVKNICKT 237
           LEGAFALVFKSVH+PG+AV TRRGSPLLIGVRS++KLST+ IPILYRT   ++ K  C  
Sbjct: 181 LEGAFALVFKSVHFPGQAVGTRRGSPLLIGVRSEHKLSTDHIPILYRTG--KDKKGSCN- 237

Query: 238 RMKRLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAVADGKLSIHRVKR 297
            + R+DS+ CL  V +KAVE++FASDASA+IEHTNRVIFLEDDD+AAV DG+LSIHR+KR
Sbjct: 238 -LSRVDSTTCLFPVEEKAVEYYFASDASAVIEHTNRVIFLEDDDVAAVVDGRLSIHRIKR 296

Query: 298 SASDDPSRAIQTLQMELQQIMKGNFSAFMQKEIFEQPESVFNTMRGRVNFETNTVLLGGL 357
           +A D P RA+QTLQMELQQIMKGNFS+FMQKEIFEQPESV NTMRGRVNF+  TV LGGL
Sbjct: 297 TAGDHPGRAVQTLQMELQQIMKGNFSSFMQKEIFEQPESVVNTMRGRVNFDDYTVNLGGL 356

Query: 358 KDHLKEIRRCRRLIVIGCGTSYHAAVATRQVLEELTELPVMVELASDFLDRNTPVFRDDV 417
           KDH+KEI+RCRRLI+I CGTSYHA VATRQVLEELTELPVMVELASDFLDRNTPVFRDDV
Sbjct: 357 KDHIKEIQRCRRLILIACGTSYHAGVATRQVLEELTELPVMVELASDFLDRNTPVFRDDV 416

Query: 418 CFFISQSGETADTLLALRYCKDRGALTVGVTNTVGSSISRETDCGVHINAGPEIGVASTK 477
           CFF+SQSGETADTL+ LRYCK+RGALTVG+TNTVGSSISRETDCGVHINAGPEIGVASTK
Sbjct: 417 CFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVHINAGPEIGVASTK 476

Query: 478 AYTSQFISLVMFGLMMSEDRISLQNRRQEIIRGLRSLPELIKEVLSLEEKIHDLALELYT 537
           AYTSQF+SLVMF LMM +DRIS+Q RR+EI+ GL+ LP+LIKEVLS++++I  LA ELY 
Sbjct: 477 AYTSQFVSLVMFALMMCDDRISMQERRKEIMLGLKRLPDLIKEVLSMDDEIQKLATELYH 536

Query: 538 QRSLLVMGRGYNYATCLEGALKIKEITYMHSEGILAGELKHGPLALIDKQMPVIMVIMKD 597
           Q+S+L+MGRGY+YATCLEGALKIKEITYMHSEGILAGELKHGPLAL+DK MPVIM+IM+D
Sbjct: 537 QKSVLIMGRGYHYATCLEGALKIKEITYMHSEGILAGELKHGPLALVDKLMPVIMIIMRD 596

Query: 598 PCFAKCQNALQQVTARQGRPIILCSKDDTESSKFAYKTIELPHTVDCLQGILSVIPLQLL 657
             +AKCQNALQQV ARQGRP+++C K+DTE+ K   +TI++PH+VDCLQGILSVIPLQLL
Sbjct: 597 HTYAKCQNALQQVVARQGRPVVICDKEDTETIKNTKRTIKVPHSVDCLQGILSVIPLQLL 656

Query: 658 SFHLAVLRGYDVDFPRNLAKSVTVE 682
           +FHLAVLRGYDVDFPRNLAKSVTVE
Sbjct: 657 AFHLAVLRGYDVDFPRNLAKSVTVE 681


>gi|29570798 phosphoribosyl pyrophosphate amidotransferase
           proprotein [Homo sapiens]
          Length = 517

 Score = 61.6 bits (148), Expect = 2e-09
 Identities = 47/186 (25%), Positives = 88/186 (47%), Gaps = 12/186 (6%)

Query: 2   CGIFAYMNYRVPRTRKEIFETLIKGLQRLEYRGYDSAGVAI-DGNNHEVKERHIQLVKKR 60
           CG+F  +      T+ ++   +  GL  L++RG +SAG+   DG++    + H       
Sbjct: 12  CGVFGCIASGEWPTQLDVPHVITLGLVGLQHRGQESAGIVTSDGSSVPTFKSH------- 64

Query: 61  GKVKALDEELYKQDSMDLKVEFETHFGIAHTRWATHGVPSAVNSHPQRSDK-GNEFVVIH 119
            K   L   ++ +D+  LK  + ++ GI HTR+AT G     N  P   +    +  V H
Sbjct: 65  -KGMGLVNHVFTEDN--LKKLYVSNLGIGHTRYATTGKCELENCQPFVVETLHGKIAVAH 121

Query: 120 NGIITNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFSTLVERVIQQLE 179
           NG + N   LRK L   G    + +D+E I +L+ Y     + +   +   ++ ++++  
Sbjct: 122 NGELVNAARLRKKLLRHGIGLSTSSDSEMITQLLAYTPPQEQDDTPDWVARIKNLMKEAP 181

Query: 180 GAFALV 185
            A++L+
Sbjct: 182 TAYSLL 187


>gi|110349721 titin isoform novex-3 [Homo sapiens]
          Length = 5604

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 419 FFISQSGETADTLLALRYCKDRGALTVGVTNTVGSSIS 456
           F ISQ G+    L+A  Y +D G  +V  TN+VG + S
Sbjct: 150 FQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATS 187


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 419 FFISQSGETADTLLALRYCKDRGALTVGVTNTVGSSIS 456
           F ISQ G+    L+A  Y +D G  +V  TN+VG + S
Sbjct: 150 FQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATS 187


>gi|110349717 titin isoform novex-2 [Homo sapiens]
          Length = 27118

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 419 FFISQSGETADTLLALRYCKDRGALTVGVTNTVGSSIS 456
           F ISQ G+    L+A  Y +D G  +V  TN+VG + S
Sbjct: 150 FQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATS 187


>gi|110349713 titin isoform novex-1 [Homo sapiens]
          Length = 27051

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 419 FFISQSGETADTLLALRYCKDRGALTVGVTNTVGSSIS 456
           F ISQ G+    L+A  Y +D G  +V  TN+VG + S
Sbjct: 150 FQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATS 187


>gi|110349715 titin isoform N2-B [Homo sapiens]
          Length = 26926

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 419 FFISQSGETADTLLALRYCKDRGALTVGVTNTVGSSIS 456
           F ISQ G+    L+A  Y +D G  +V  TN+VG + S
Sbjct: 150 FQISQEGDLYSLLIAEAYPEDSGTYSVNATNSVGRATS 187


>gi|5453726 leucine rich repeat (in FLII) interacting protein 2
           isoform 1 [Homo sapiens]
          Length = 721

 Score = 31.6 bits (70), Expect = 2.5
 Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 10/95 (10%)

Query: 500 LQNRRQEIIRGLRSLPELIKEVLSLEEKIHDLALELY-TQRSLL-------VMGRGYNYA 551
           LQ++ +E+  GLR   ELI+E   +++KI  +  E++  Q +LL        + +   Y 
Sbjct: 438 LQHKMEELKEGLRQRDELIEEKQRMQQKIDTMTKEVFDLQETLLWKDKKIGALEKQKEYI 497

Query: 552 TCLEGAL-KIKEITYMHSEGILAGELKHGPLALID 585
            CL      ++E      E +  GE KHG + + D
Sbjct: 498 ACLRNERDMLREELADLQETVKTGE-KHGLVIIPD 531


>gi|195947369 junction-mediating and regulatory protein [Homo
           sapiens]
          Length = 988

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 30/128 (23%), Positives = 55/128 (42%), Gaps = 6/128 (4%)

Query: 492 MMSEDRISLQNRR---QEIIRGLRSLPELIKEVLSLEEKIHDLALELYTQRSLLVMGRGY 548
           MM    I L+ R+   +E ++ LR   E I  +  LE   +DL L+LY  +  ++     
Sbjct: 491 MMRAKEICLEQRKHALKEEMQSLRGGTEAIARLDQLEADYYDLQLQLYEVQFEILKCEEL 550

Query: 549 NYATCLEGALKIKEITYMHSEGILAGELKHGPLALIDKQMPVIMVIMKDPCFAKCQNALQ 608
                LE    IK +     + ++  +      A+++K+       ++     K Q   +
Sbjct: 551 LLTAQLE---SIKRLISEKRDEVVYYDTYESMEAMLEKEEMAASAYLQREELQKLQQKAR 607

Query: 609 QVTARQGR 616
           Q+ AR+GR
Sbjct: 608 QLEARRGR 615


>gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]
          Length = 1437

 Score = 31.2 bits (69), Expect = 3.3
 Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 5/81 (6%)

Query: 234  ICKTRMKRLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVI-FLEDDDIAAVADGKLSI 292
            IC  R   L+     H +GD  V FF + D   +  H  RV  ++E D   + A+G+ SI
Sbjct: 978  ICNPRSVPLNIQGLKHDLGDFPVFFFGSHDYYWV--HQGRVFPYVEGD--KSFAEGQTSI 1033

Query: 293  HRVKRSASDDPSRAIQTLQME 313
            ++  + A ++ ++  Q L+ +
Sbjct: 1034 NKTFKKALEEAAKRFQELKAQ 1054


>gi|5174573 myeloid/lymphoid or mixed-lineage leukemia trithorax
           homolog 2 [Homo sapiens]
          Length = 1210

 Score = 30.8 bits (68), Expect = 4.3
 Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 24/199 (12%)

Query: 65  ALDEELYKQDSMDLKV-EFETHFGIAHTRWATHGVPSAVNSHPQRSDKGNEFVVIHNGII 123
           A    LY  D   L++ E E     AH           +   P ++ KG+E       ++
Sbjct: 2   AAQSSLYNDDRNLLRIREKERRNQEAHQEKEAFPEKIPLFGEPYKTAKGDELSSRIQNML 61

Query: 124 TNYKDLRKFLESKGYEFESETDTETIAKLIKYVFDNRETEDITFSTLVERVIQQLEGAFA 183
            NY+++++FL +K +    +     + K  KY     +   I  S+              
Sbjct: 62  GNYEEVKEFLSTKSHTHRLDASENRLGK-PKYPLIPDKGSSIPSSSF------------- 107

Query: 184 LVFKSVHYPGEAVATRRGSPLLIG-VRSKYKLS---TEQIPILY-RTCTLENVKNICKTR 238
               SVH+  +++ T    PL +G +    K++   TE +P L+ ++C   + +++ + R
Sbjct: 108 --HTSVHH--QSIHTPASGPLSVGNISHNPKMAQPRTEPMPSLHAKSCGPPDSQHLTQDR 163

Query: 239 MKRLDSSACLHAVGDKAVE 257
           + +    +  H  GD+  +
Sbjct: 164 LGQEGFGSSHHKKGDRRAD 182


>gi|88703041 sorting nexin 6 isoform b [Homo sapiens]
          Length = 418

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 16/144 (11%)

Query: 229 ENVKNICKTRMKRLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAVADG 288
           E +++  K  +K  D    +   G K V+ FF  + + ++E+ NRV      D +A +D 
Sbjct: 194 EKLEDFFKNMVKSADG---VIVSGVKDVDDFFEHERTFLLEYHNRV-----KDASAKSDR 245

Query: 289 KLSIHRVKRSASDDPSRAIQTLQMELQQIMKGNFSAFMQ-KEIFEQPESVFNTMRGRVNF 347
               H   +SA+DD +R   +L     Q        F++  E+F++   +      RV+ 
Sbjct: 246 MTRSH---KSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKI----EARVSA 298

Query: 348 ETNTVLLGGLKDHLKEIRRCRRLI 371
           + +  L   LK +L+E +  + L+
Sbjct: 299 DEDLKLSDLLKYYLRESQAAKDLL 322


>gi|88703043 sorting nexin 6 isoform a [Homo sapiens]
          Length = 290

 Score = 29.6 bits (65), Expect = 9.6
 Identities = 35/144 (24%), Positives = 66/144 (45%), Gaps = 16/144 (11%)

Query: 229 ENVKNICKTRMKRLDSSACLHAVGDKAVEFFFASDASAIIEHTNRVIFLEDDDIAAVADG 288
           E +++  K  +K  D    +   G K V+ FF  + + ++E+ NRV      D +A +D 
Sbjct: 66  EKLEDFFKNMVKSADG---VIVSGVKDVDDFFEHERTFLLEYHNRV-----KDASAKSDR 117

Query: 289 KLSIHRVKRSASDDPSRAIQTLQMELQQIMKGNFSAFMQ-KEIFEQPESVFNTMRGRVNF 347
               H   +SA+DD +R   +L     Q        F++  E+F++   +      RV+ 
Sbjct: 118 MTRSH---KSAADDYNRIGSSLYALGTQDSTDICKFFLKVSELFDKTRKI----EARVSA 170

Query: 348 ETNTVLLGGLKDHLKEIRRCRRLI 371
           + +  L   LK +L+E +  + L+
Sbjct: 171 DEDLKLSDLLKYYLRESQAAKDLL 194


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.136    0.389 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,781,099
Number of Sequences: 37866
Number of extensions: 935896
Number of successful extensions: 2202
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2170
Number of HSP's gapped (non-prelim): 34
length of query: 682
length of database: 18,247,518
effective HSP length: 109
effective length of query: 573
effective length of database: 14,120,124
effective search space: 8090831052
effective search space used: 8090831052
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.