Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 47679089
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|47679089 receptor accessory protein 3 [Homo sapiens]
(255 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|47679089 receptor accessory protein 3 [Homo sapiens] 514 e-146
gi|12597657 receptor accessory protein 1 [Homo sapiens] 259 1e-69
gi|20149695 receptor accessory protein 4 [Homo sapiens] 255 3e-68
gi|42476206 receptor accessory protein 2 [Homo sapiens] 245 2e-65
gi|115430112 receptor accessory protein 5 [Homo sapiens] 91 1e-18
gi|19923919 receptor accessory protein 6 [Homo sapiens] 73 3e-13
gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens] 33 0.32
gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens] 33 0.32
gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens] 33 0.32
gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens] 33 0.32
gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo... 32 0.54
gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo... 32 0.70
gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo ... 32 0.70
gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo ... 32 0.70
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 31 1.2
gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo ... 30 2.0
gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo ... 30 2.0
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 30 2.0
gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens] 30 2.0
gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens] 30 2.0
gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens] 30 2.0
gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens] 30 2.0
gi|82534351 microtubule-associated protein tau isoform 1 [Homo s... 29 3.5
gi|95147333 phospholipase C, beta 2 [Homo sapiens] 29 3.5
gi|22547204 hairless protein isoform a [Homo sapiens] 29 3.5
gi|22547207 hairless protein isoform b [Homo sapiens] 29 3.5
gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo sap... 29 3.5
gi|110431370 espin [Homo sapiens] 29 3.5
gi|4505085 melanoma antigen family B, 4 [Homo sapiens] 29 4.6
gi|23308697 signal recognition particle receptor [Homo sapiens] 29 4.6
>gi|47679089 receptor accessory protein 3 [Homo sapiens]
Length = 255
Score = 514 bits (1324), Expect = e-146
Identities = 255/255 (100%), Positives = 255/255 (100%)
Query: 1 MVSWMISRAVVLVFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVA 60
MVSWMISRAVVLVFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVA
Sbjct: 1 MVSWMISRAVVLVFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVA 60
Query: 61 WFPLYYELKIAFVIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVN 120
WFPLYYELKIAFVIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVN
Sbjct: 61 WFPLYYELKIAFVIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVN 120
Query: 121 FGRQGLNLAATAAVTAAVKSQGAITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKS 180
FGRQGLNLAATAAVTAAVKSQGAITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKS
Sbjct: 121 FGRQGLNLAATAAVTAAVKSQGAITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKS 180
Query: 181 KPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEMLTHKGLRRSQSMKSVKTTKGRKEVRY 240
KPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEMLTHKGLRRSQSMKSVKTTKGRKEVRY
Sbjct: 181 KPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEMLTHKGLRRSQSMKSVKTTKGRKEVRY 240
Query: 241 GSLKYKVKKRPQVYF 255
GSLKYKVKKRPQVYF
Sbjct: 241 GSLKYKVKKRPQVYF 255
>gi|12597657 receptor accessory protein 1 [Homo sapiens]
Length = 201
Score = 259 bits (663), Expect = 1e-69
Identities = 127/191 (66%), Positives = 153/191 (80%), Gaps = 3/191 (1%)
Query: 1 MVSWMISRAVVLVFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVA 60
MVSW+ISR VVL+FG LYPAYYSYKAVK+K++KEYV+WMMYWI+FAL+T ET D +
Sbjct: 1 MVSWIISRLVVLIFGTLYPAYYSYKAVKSKDIKEYVKWMMYWIIFALFTTAETFTDIFLC 60
Query: 61 WFPLYYELKIAFVIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVN 120
WFP YYELKIAFV WLLSPYTKG+SL+YRKF+HP LSSKE+EIDD +VQAK+R Y+ +V+
Sbjct: 61 WFPFYYELKIAFVAWLLSPYTKGSSLLYRKFVHPTLSSKEKEIDDCLVQAKDRSYDALVH 120
Query: 121 FGRQGLNLAATAAVTAAVKSQGAITERLRSFSMHDLTTIQGD---EPVGQRPYQPLPEAK 177
FG++GLN+AATAAV AA K QGA++ERLRSFSM DLTTI+GD P G P +
Sbjct: 121 FGKRGLNVAATAAVMAASKGQGALSERLRSFSMQDLTTIRGDGAPAPSGPPPPGSGRASG 180
Query: 178 KKSKPAPSESA 188
K +P S SA
Sbjct: 181 KHGQPKMSRSA 191
>gi|20149695 receptor accessory protein 4 [Homo sapiens]
Length = 257
Score = 255 bits (651), Expect = 3e-68
Identities = 141/258 (54%), Positives = 175/258 (67%), Gaps = 17/258 (6%)
Query: 1 MVSWMISRAVVLVFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVA 60
MVSWMI R VVLVFGML PAY SYKAVKTKN++EYVRWMMYWIVFAL+ E V D ++
Sbjct: 1 MVSWMICRLVVLVFGMLCPAYASYKAVKTKNIREYVRWMMYWIVFALFMAAEIVTDIFIS 60
Query: 61 WFPLYYELKIAFVIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVN 120
WFP YYE+K+AFV+WLLSPYTKGASL+YRKF+HP LS E+EID YIVQAKER YET+++
Sbjct: 61 WFPFYYEIKMAFVLWLLSPYTKGASLLYRKFVHPSLSRHEKEIDAYIVQAKERSYETVLS 120
Query: 121 FGRQGLNLAATAAVTAAVKSQGAITERLRSFSMHDLTTI-QGDEPVGQRPYQPLPEAKKK 179
FG++GLN+AA+AAV AA KSQGA+ RLRSFSM DL +I P P + +
Sbjct: 121 FGKRGLNIAASAAVQAATKSQGALAGRLRSFSMQDLRSISDAPAPAYHDPLYLEDQVSHR 180
Query: 180 SKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEML-------THKGLRRSQSMKSVKTT 232
P + G L+D D T++E +SD E + K L RSQS++ VK
Sbjct: 181 RPPIGYRAGG----LQDSD--TEDEC---WSDTEAVPRAPARPREKPLIRSQSLRVVKRK 231
Query: 233 KGRKEVRYGSLKYKVKKR 250
+E SLK + +K+
Sbjct: 232 PPVREGTSRSLKVRTRKK 249
>gi|42476206 receptor accessory protein 2 [Homo sapiens]
Length = 252
Score = 245 bits (626), Expect = 2e-65
Identities = 131/258 (50%), Positives = 175/258 (67%), Gaps = 22/258 (8%)
Query: 1 MVSWMISRAVVLVFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVA 60
MVSW+ISR VVL+FG LYPAY SYKAVKTKNVKEYV+WMMYWIVFA +T ET+ D ++
Sbjct: 1 MVSWIISRLVVLIFGTLYPAYSSYKAVKTKNVKEYVKWMMYWIVFAFFTTAETLTDIVLS 60
Query: 61 WFPLYYELKIAFVIWLLSPYTKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYETMVN 120
WFP Y+ELKIAFVIWLLSPYTKG+S++YRKF+HP LS+KE+EID+YI QA+++ YETM+
Sbjct: 61 WFPFYFELKIAFVIWLLSPYTKGSSVLYRKFVHPTLSNKEKEIDEYITQARDKSYETMMR 120
Query: 121 FGRQGLNLAATAAVTAAVKSQGAITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKS 180
G++GLNLAA AAVTAA K G ++E+LRSFSM DLT I+ ++ + PL +
Sbjct: 121 VGKRGLNLAANAAVTAAAK--GVLSEKLRSFSMQDLTLIRDEDAL------PLQRPDGRL 172
Query: 181 KPAPS------ESAG--YGIPLKDGDEKTDEEAEGPYSDNEMLTHKGLRRSQSMKSVKTT 232
+P+P E G + L+ D E S+++M G + + K +K
Sbjct: 173 RPSPGSLLDTIEDLGDDPALSLRSSTNPADSRTEA--SEDDM----GDKAPKRAKPIKKA 226
Query: 233 KGRKEVRYGSLKYKVKKR 250
+ + +LK + KK+
Sbjct: 227 PKAEPLASKTLKTRPKKK 244
>gi|115430112 receptor accessory protein 5 [Homo sapiens]
Length = 189
Score = 90.5 bits (223), Expect = 1e-18
Identities = 35/106 (33%), Positives = 66/106 (62%), Gaps = 1/106 (0%)
Query: 13 VFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVAWFPLYYELKIAF 72
+ G YPAY S KA+++ N ++ +W+ YW+V+ ++++ E +D ++WFP YY LK F
Sbjct: 61 LIGFGYPAYISIKAIESPNKEDDTQWLTYWVVYGVFSIAEFFSDIFLSWFPFYYMLKCGF 120
Query: 73 VIWLLSPY-TKGASLIYRKFLHPLLSSKEREIDDYIVQAKERGYET 117
++W ++P + GA L+Y++ + P E ++D + K++ ET
Sbjct: 121 LLWCMAPSPSNGAELLYKRIIRPFFLKHESQMDSVVKDLKDKAKET 166
>gi|19923919 receptor accessory protein 6 [Homo sapiens]
Length = 184
Score = 72.8 bits (177), Expect = 3e-13
Identities = 31/93 (33%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 13 VFGMLYPAYYSYKAVKTKNVKEYVRWMMYWIVFALYTVIETVADQTVAWFPLYYELKIAF 72
+ G +YPAY S KA+++ + + W+ YW+V+AL+ + E +D ++WFP YY K AF
Sbjct: 60 LIGFVYPAYASIKAIESPSKDDDTVWLTYWVVYALFGLAEFFSDLLLSWFPFYYVGKCAF 119
Query: 73 VIWLLSPYT-KGASLIYRKFLHPLLSSKEREID 104
+++ ++P GA ++Y++ + PL +D
Sbjct: 120 LLFCMAPRPWNGALMLYQRVVRPLFLRHHGAVD 152
>gi|192807336 arsenate resistance protein 2 isoform e [Homo sapiens]
Length = 871
Score = 32.7 bits (73), Expect = 0.32
Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 14/163 (8%)
Query: 88 YRKFLHPLLSSKEREIDDYIVQAKERGYETMVNFGRQGLNLAATAAVTAAVKSQGAITER 147
+R HP K R+ +Q + R + +++ G L A VK A +
Sbjct: 197 FRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDIDKADAIVKMLDAAVIK 256
Query: 148 LRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAE- 206
+ + +DL ++ +E Q A K +P+ E G L DG+ KT+++ E
Sbjct: 257 MEGGTENDLRILEQEEEEEQ--------AGKPGEPSKKEEGRAGAGLGDGERKTNDKDEK 308
Query: 207 ---GPYSDNEMLTHKGLRRSQ--SMKSVKTTKGRKEVRYGSLK 244
G ++N+ ++S+ K K KE + S K
Sbjct: 309 KEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKK 351
>gi|192807334 arsenate resistance protein 2 isoform d [Homo sapiens]
Length = 872
Score = 32.7 bits (73), Expect = 0.32
Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 14/163 (8%)
Query: 88 YRKFLHPLLSSKEREIDDYIVQAKERGYETMVNFGRQGLNLAATAAVTAAVKSQGAITER 147
+R HP K R+ +Q + R + +++ G L A VK A +
Sbjct: 197 FRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDIDKADAIVKMLDAAVIK 256
Query: 148 LRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAE- 206
+ + +DL ++ +E Q A K +P+ E G L DG+ KT+++ E
Sbjct: 257 MEGGTENDLRILEQEEEEEQ--------AGKPGEPSKKEEGRAGAGLGDGERKTNDKDEK 308
Query: 207 ---GPYSDNEMLTHKGLRRSQ--SMKSVKTTKGRKEVRYGSLK 244
G ++N+ ++S+ K K KE + S K
Sbjct: 309 KEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKK 351
>gi|192807332 arsenate resistance protein 2 isoform c [Homo sapiens]
Length = 875
Score = 32.7 bits (73), Expect = 0.32
Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 14/163 (8%)
Query: 88 YRKFLHPLLSSKEREIDDYIVQAKERGYETMVNFGRQGLNLAATAAVTAAVKSQGAITER 147
+R HP K R+ +Q + R + +++ G L A VK A +
Sbjct: 197 FRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDIDKADAIVKMLDAAVIK 256
Query: 148 LRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAE- 206
+ + +DL ++ +E Q A K +P+ E G L DG+ KT+++ E
Sbjct: 257 MEGGTENDLRILEQEEEEEQ--------AGKPGEPSKKEEGRAGAGLGDGERKTNDKDEK 308
Query: 207 ---GPYSDNEMLTHKGLRRSQ--SMKSVKTTKGRKEVRYGSLK 244
G ++N+ ++S+ K K KE + S K
Sbjct: 309 KEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKK 351
>gi|58331218 arsenate resistance protein 2 isoform a [Homo sapiens]
Length = 876
Score = 32.7 bits (73), Expect = 0.32
Identities = 37/163 (22%), Positives = 65/163 (39%), Gaps = 14/163 (8%)
Query: 88 YRKFLHPLLSSKEREIDDYIVQAKERGYETMVNFGRQGLNLAATAAVTAAVKSQGAITER 147
+R HP K R+ +Q + R + +++ G L A VK A +
Sbjct: 197 FRSKYHPDEVGKRRQEARGALQNRLRVFLSLMETGWFDNLLLDIDKADAIVKMLDAAVIK 256
Query: 148 LRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAE- 206
+ + +DL ++ +E Q A K +P+ E G L DG+ KT+++ E
Sbjct: 257 MEGGTENDLRILEQEEEEEQ--------AGKPGEPSKKEEGRAGAGLGDGERKTNDKDEK 308
Query: 207 ---GPYSDNEMLTHKGLRRSQ--SMKSVKTTKGRKEVRYGSLK 244
G ++N+ ++S+ K K KE + S K
Sbjct: 309 KEDGKQAENDSSNDDKTKKSEGDGDKEEKKEDSEKEAKKSSKK 351
>gi|4502739 cyclin-dependent kinase 5, regulatory subunit 2 [Homo
sapiens]
Length = 367
Score = 32.0 bits (71), Expect = 0.54
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 166 GQRPYQPLPEAKKKSKPAPSES-AGYGIPLKDGDEKTDEEAEGPYSDNEMLTHKGLRRSQ 224
G+RP LPE KKK+ PA E+ GYG P K + + P LT K L +
Sbjct: 15 GRRP-GGLPEEKKKAPPAGDEALGGYGAPPVGKGGKGESRLKRPSVLISALTWKRLVAA- 72
Query: 225 SMKSVKTTKGRKEV 238
S K KG K+V
Sbjct: 73 ---SAKKKKGSKKV 83
>gi|114155127 regulator of G-protein signalling 3 isoform 6 [Homo
sapiens]
Length = 1198
Score = 31.6 bits (70), Expect = 0.70
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 143 AITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTD 202
A+TE + S DL GD P RP +PE + S + A G GDE+
Sbjct: 828 ALTED--TMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQKAGAEQGC---SGDEEDA 882
Query: 203 EEAE 206
EEAE
Sbjct: 883 EEAE 886
>gi|10864075 regulator of G-protein signalling 3 isoform 2 [Homo
sapiens]
Length = 519
Score = 31.6 bits (70), Expect = 0.70
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 143 AITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTD 202
A+TE + S DL GD P RP +PE + S + A G GDE+
Sbjct: 149 ALTED--TMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQKAGAEQGC---SGDEEDA 203
Query: 203 EEAE 206
EEAE
Sbjct: 204 EEAE 207
>gi|62865651 regulator of G-protein signalling 3 isoform 1 [Homo
sapiens]
Length = 917
Score = 31.6 bits (70), Expect = 0.70
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 5/64 (7%)
Query: 143 AITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTD 202
A+TE + S DL GD P RP +PE + S + A G GDE+
Sbjct: 547 ALTED--TMSSGDLLAATGDPPAAPRPAFVIPEVRLDSTYSQKAGAEQGC---SGDEEDA 601
Query: 203 EEAE 206
EEAE
Sbjct: 602 EEAE 605
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 30.8 bits (68), Expect = 1.2
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 11/79 (13%)
Query: 172 PLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEMLTHKGLRRSQSMKSVKT 231
P + KK+ K S+ D D +D ++ SD+E T + K+
Sbjct: 179 PKSKVKKEEKKRHKSSSSSSSSSSDSDSSSDSQSSSDSSDSESATEE-----------KS 227
Query: 232 TKGRKEVRYGSLKYKVKKR 250
K +K+ R S K+K +K+
Sbjct: 228 KKRKKKHRKNSRKHKKEKK 246
>gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo
sapiens]
Length = 297
Score = 30.0 bits (66), Expect = 2.0
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 16/86 (18%)
Query: 163 EPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEMLTHKGLRR 222
+P QR +PL ++K+ PAPS G + L D K+ A P + E
Sbjct: 26 DPEEQRELEPLIRTRRKNIPAPSRFQGLSL-LPSCDSKS--SASKPQMEEE--------- 73
Query: 223 SQSMKSVKTTKGRKEVRYGSLKYKVK 248
+S++ +G +V GSL+ + K
Sbjct: 74 ----RSLQVEEGSLQVEEGSLQVEEK 95
>gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo
sapiens]
Length = 487
Score = 30.0 bits (66), Expect = 2.0
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 16/86 (18%)
Query: 163 EPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDNEMLTHKGLRR 222
+P QR +PL ++K+ PAPS G + L D K+ A P + E
Sbjct: 216 DPEEQRELEPLIRTRRKNIPAPSRFQGLSL-LPSCDSKS--SASKPQMEEE--------- 263
Query: 223 SQSMKSVKTTKGRKEVRYGSLKYKVK 248
+S++ +G +V GSL+ + K
Sbjct: 264 ----RSLQVEEGSLQVEEGSLQVEEK 285
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 30.0 bits (66), Expect = 2.0
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 6/89 (6%)
Query: 125 GLNLAATAAVTAAVKSQGAITERLRS-FSMHDLTTIQ--GDEPVGQRPYQPLPEAKKKSK 181
G+ A A+VT G L S FS + T+Q GD+ + + A++ S
Sbjct: 138 GVKSWAQASVTHGAHGDGGRASSLLSRFSREEFPTLQAAGDQDKAAKERE---SAEQSSG 194
Query: 182 PAPSESAGYGIPLKDGDEKTDEEAEGPYS 210
P PS +DG + +E EGP S
Sbjct: 195 PGPSLRPQNSTTWRDGGGRGPDELEGPDS 223
>gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens]
Length = 1031
Score = 30.0 bits (66), Expect = 2.0
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 160 QGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDN----EML 215
QG P+ P P+P+ ++ E G+P G +AE P S E+L
Sbjct: 668 QGPSPLAVDPLHPVPQPPTLAEAVKIERTHPGLP--KGVTCPGVKAEAPLSQRWTVPELL 725
Query: 216 THKGLRRSQSMKSVK 230
TH G+ Q + +K
Sbjct: 726 THPGIHAWQWSRELK 740
>gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens]
Length = 1006
Score = 30.0 bits (66), Expect = 2.0
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 160 QGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDN----EML 215
QG P+ P P+P+ ++ E G+P G +AE P S E+L
Sbjct: 643 QGPSPLAVDPLHPVPQPPTLAEAVKIERTHPGLP--KGVTCPGVKAEAPLSQRWTVPELL 700
Query: 216 THKGLRRSQSMKSVK 230
TH G+ Q + +K
Sbjct: 701 THPGIHAWQWSRELK 715
>gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens]
Length = 1044
Score = 30.0 bits (66), Expect = 2.0
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 160 QGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDN----EML 215
QG P+ P P+P+ ++ E G+P G +AE P S E+L
Sbjct: 681 QGPSPLAVDPLHPVPQPPTLAEAVKIERTHPGLP--KGVTCPGVKAEAPLSQRWTVPELL 738
Query: 216 THKGLRRSQSMKSVK 230
TH G+ Q + +K
Sbjct: 739 THPGIHAWQWSRELK 753
>gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens]
Length = 1079
Score = 30.0 bits (66), Expect = 2.0
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 6/75 (8%)
Query: 160 QGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEEAEGPYSDN----EML 215
QG P+ P P+P+ ++ E G+P G +AE P S E+L
Sbjct: 716 QGPSPLAVDPLHPVPQPPTLAEAVKIERTHPGLP--KGVTCPGVKAEAPLSQRWTVPELL 773
Query: 216 THKGLRRSQSMKSVK 230
TH G+ Q + +K
Sbjct: 774 THPGIHAWQWSRELK 788
>gi|82534351 microtubule-associated protein tau isoform 1 [Homo
sapiens]
Length = 758
Score = 29.3 bits (64), Expect = 3.5
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
Query: 132 AAVTAAVKSQGAITERLRSFS-MHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGY 190
++VT+ S GA +L+ + T +G P GQ+ K+ PAP
Sbjct: 443 SSVTSRTGSSGAKEMKLKGADGKTKIATPRGAAPPGQKGQANATRIPAKTPPAPKTPPSS 502
Query: 191 GIPLKDGD 198
G P K GD
Sbjct: 503 GEPPKSGD 510
>gi|95147333 phospholipase C, beta 2 [Homo sapiens]
Length = 1185
Score = 29.3 bits (64), Expect = 3.5
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 9/92 (9%)
Query: 143 AITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTD 202
A+ ++ FS HD +++ E +G P +P P A P S+ G P +G
Sbjct: 815 ALANPIKFFSAHDTKSVKLKEAMGGLPEKPFPLA----SPVASQVNGALAPTSNGSPAAR 870
Query: 203 EEAEGPYSDNEMLTHKGLRRSQSMKSVKTTKG 234
A E + R+ S++ ++ KG
Sbjct: 871 AGAR-----EEAMKEAAEPRTASLEELRELKG 897
>gi|22547204 hairless protein isoform a [Homo sapiens]
Length = 1189
Score = 29.3 bits (64), Expect = 3.5
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 147 RLRSFSMHDLTTIQG--DEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEE 204
RLR+ +QG P +RP P P ++ E I KD D +E
Sbjct: 407 RLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDE 466
Query: 205 AEGPYSDNEMLTHKGLR 221
+GP L GL+
Sbjct: 467 QKGPQDGQASLQDPGLQ 483
>gi|22547207 hairless protein isoform b [Homo sapiens]
Length = 1134
Score = 29.3 bits (64), Expect = 3.5
Identities = 21/77 (27%), Positives = 29/77 (37%), Gaps = 2/77 (2%)
Query: 147 RLRSFSMHDLTTIQG--DEPVGQRPYQPLPEAKKKSKPAPSESAGYGIPLKDGDEKTDEE 204
RLR+ +QG P +RP P P ++ E I KD D +E
Sbjct: 407 RLRALKRAGSPEVQGAMGSPAPKRPPDPFPGTAEQGAGGWQEVRDTSIGNKDVDSGQHDE 466
Query: 205 AEGPYSDNEMLTHKGLR 221
+GP L GL+
Sbjct: 467 QKGPQDGQASLQDPGLQ 483
>gi|154759423 Cdk5 and Abl enzyme substrate 1 isoform 2 [Homo
sapiens]
Length = 633
Score = 29.3 bits (64), Expect = 3.5
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 129 AATAAVTAAVKSQGAITERLRSFSMHDLTTIQGDEPVGQRPYQPLPEAKKKSKPAP 184
AA AA TAA S A T+ + + +P P QP PE +K + P
Sbjct: 4 AAAAATTAACSSGSAGTDAAGASGLQQPPPQPQPQPAAAAPAQPPPEPPRKPRMDP 59
>gi|110431370 espin [Homo sapiens]
Length = 854
Score = 29.3 bits (64), Expect = 3.5
Identities = 25/80 (31%), Positives = 32/80 (40%), Gaps = 8/80 (10%)
Query: 169 PYQPLPEAKKKSKPAPS---ESAGYGIPLKDGDEKTDEEAE----GPYSDNEMLTHKGLR 221
P PLPEA PAP ESAG G + T P DN L + ++
Sbjct: 602 PPPPLPEAASSPPPAPPLPLESAGPGCGQRRSSSSTGSTKSFNMMSPTGDNSELLAE-IK 660
Query: 222 RSQSMKSVKTTKGRKEVRYG 241
+S+K +KG V G
Sbjct: 661 AGKSLKPTPQSKGLTTVFSG 680
>gi|4505085 melanoma antigen family B, 4 [Homo sapiens]
Length = 346
Score = 28.9 bits (63), Expect = 4.6
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 173 LPEAKKKSKPAPSESAGYGIPLKD-GDEKTDEEAEGPYSDNEMLTHKGLRRSQSMKSVKT 231
+P+ ++ P S +A D GDE DEE N + +S+K T
Sbjct: 58 IPQEPQREPPTTSAAAAMSCTGSDKGDESQDEE-------NASSSQASTSTERSLKDSLT 110
Query: 232 TKGRKEVRYGSLKYKVKK 249
K + V++ KYK+K+
Sbjct: 111 RKTKMLVQFLLYKYKMKE 128
>gi|23308697 signal recognition particle receptor [Homo sapiens]
Length = 638
Score = 28.9 bits (63), Expect = 4.6
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 18/98 (18%)
Query: 163 EPVGQRPYQPLPEAKKK-------------SKPAPSESAGYGIPLKDGDEKTDEEAEGPY 209
E G++P + +KKK SKP P+E +G + ++G E + EE
Sbjct: 154 ETRGEKPKEKAKNSKKKGAKKEGSDGPLATSKPVPAEKSGLPVGPENGVELSKEELIRRK 213
Query: 210 SDNEMLTHKGLRRSQSMKSVKT----TKGRKEVRYGSL 243
+ E + G +S KS K+ KG+K R L
Sbjct: 214 RE-EFIQKHGRGMEKSNKSTKSDAPKEKGKKAPRVWEL 250
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.391
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,926,100
Number of Sequences: 37866
Number of extensions: 395095
Number of successful extensions: 1720
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 1697
Number of HSP's gapped (non-prelim): 45
length of query: 255
length of database: 18,247,518
effective HSP length: 100
effective length of query: 155
effective length of database: 14,460,918
effective search space: 2241442290
effective search space used: 2241442290
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.