Guide to the Human Genome
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Name: REEP3 Sequence: fasta or formatted (255aa) NCBI GI: 47679089
Description:

receptor accessory protein 3

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         20           2
 C cysteine            0.0          0           0
 D aspartate           3.5          9           2
 E glutamate           6.7         17           2
 F phenylalanine       3.1          8           1
 G glycine             5.9         15           1
 H histidine           1.2          3           1
 I isoleucine          4.3         11           1
 K lysine              9.8         25           3
 L leucine             7.8         20           2
 M methionine          3.5          9           2
 N asparagine          1.6          4           1
 P proline             5.1         13           1
 Q glutamine           3.5          9           1
 R arginine            5.5         14           2
 S serine              7.1         18           2
 T threonine           5.9         15           2
 V valine              8.2         21           2
 W tryptophan          2.0          5           1
 Y tyrosine            7.5         19           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   receptor accessory protein 3 
REEP1                 0.479   receptor accessory protein 1 
REEP4                 0.470   receptor accessory protein 4 
REEP2                 0.450   receptor accessory protein 2 
REEP5                 0.135   receptor accessory protein 5 
REEP6                 0.098   receptor accessory protein 6 
SRRT                  0.016   arsenate resistance protein 2 isoform e 
SRRT                  0.016   arsenate resistance protein 2 isoform d 
SRRT                  0.016   arsenate resistance protein 2 isoform c 
SRRT                  0.016   arsenate resistance protein 2 isoform a 
CDK5R2                0.014   cyclin-dependent kinase 5, regulatory subunit 2 [Homo...
RGS3                  0.014   regulator of G-protein signalling 3 isoform 6 [Homo...
RGS3                  0.014   regulator of G-protein signalling 3 isoform 2 
RGS3                  0.014   regulator of G-protein signalling 3 isoform 1 
PPIG                  0.012   peptidylprolyl isomerase G 
LOC100289979          0.010   PREDICTED: hypothetical protein XP_002346878 
LOC100289273          0.010   PREDICTED: hypothetical protein XP_002342720 
BAT2                  0.010   HLA-B associated transcript-2 
C9orf131              0.010   hypothetical protein LOC138724 isoform D 
C9orf131              0.010   hypothetical protein LOC138724 isoform C 
C9orf131              0.010   hypothetical protein LOC138724 isoform B 
C9orf131              0.010   hypothetical protein LOC138724 isoform A 
MAPT                  0.008   microtubule-associated protein tau isoform 1 
PLCB2                 0.008   phospholipase C, beta 2 
HR                    0.008   hairless protein isoform a 
HR                    0.008   hairless protein isoform b 
CABLES1               0.008   Cdk5 and Abl enzyme substrate 1 isoform 2 
ESPN                  0.008   espin 
MAGEB4                0.008   melanoma antigen family B, 4 
SRPR                  0.008   signal recognition particle receptor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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