Guide to the Human Genome
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Name: HUS1 Sequence: fasta or formatted (280aa) NCBI GI: 4758576
Description:

HUS1 checkpoint protein

Referenced in:

DNases, Recombination, and DNA Repair

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         16           1
 C cysteine            2.5          7           1
 D aspartate           4.6         13           1
 E glutamate           7.5         21           1
 F phenylalanine       3.9         11           2
 G glycine             2.5          7           2
 H histidine           3.6         10           1
 I isoleucine          6.8         19           1
 K lysine              7.9         22           1
 L leucine            12.5         35           2
 M methionine          3.2          9           1
 N asparagine          7.5         21           2
 P proline             4.3         12           2
 Q glutamine           2.9          8           2
 R arginine            3.2          9           1
 S serine              6.8         19           4
 T threonine           5.0         14           2
 V valine              7.9         22           2
 W tryptophan          0.7          2           1
 Y tyrosine            1.1          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   HUS1 checkpoint protein 
HUS1B                 0.472   HUS1 checkpoint protein B 
GCC2                  0.015   GRIP and coiled-coil domain-containing 2 
EXPH5                 0.011   exophilin 5 isoform c 
EXPH5                 0.011   exophilin 5 isoform b 
EXPH5                 0.011   exophilin 5 isoform a 
DMD                   0.009   dystrophin Dp427c isoform 
DMD                   0.009   dystrophin Dp427p2 isoform 
DMD                   0.009   dystrophin Dp427p1 isoform 
DMD                   0.009   dystrophin Dp427l isoform 
DMD                   0.009   dystrophin Dp427m isoform 
DOT1L                 0.009   DOT1-like, histone H3 methyltransferase 
SEC22A                0.007   SEC22 vesicle trafficking protein homolog A 
LOC390561             0.006   PREDICTED: similar to hect domain and RLD 2 
LOC653781             0.006   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.006   PREDICTED: similar to protein expressed in prostate,...
OTOF                  0.006   otoferlin isoform c 
OTOF                  0.006   otoferlin isoform b 
OTOF                  0.006   otoferlin isoform d 
OTOF                  0.006   otoferlin isoform a 
FAT4                  0.006   FAT tumor suppressor homolog 4 
SLITRK5               0.006   SLIT and NTRK-like family, member 5 
SULT1C3               0.006   sulfotransferase family, cytosolic, 1C, member 3 [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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