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Search of human proteins with 4757732
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4757732 programmed cell death 8 isoform 1 [Homo sapiens]
(613 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4757732 programmed cell death 8 isoform 1 [Homo sapiens] 1217 0.0
gi|22202629 programmed cell death 8 isoform 2 [Homo sapiens] 1141 0.0
gi|195927006 programmed cell death 8 isoform 5 [Homo sapiens] 637 0.0
gi|22202631 programmed cell death 8 isoform 3 [Homo sapiens] 584 e-167
gi|195927004 programmed cell death 8 isoform 4 [Homo sapiens] 523 e-148
gi|226437568 apoptosis-inducing factor, mitochondrion-associated... 112 8e-25
gi|65787454 apoptosis-inducing factor, mitochondrion-associated,... 112 8e-25
gi|21389617 apoptosis-inducing factor, mitochondrion-associated,... 112 8e-25
gi|14318424 apoptosis-inducing factor (AIF)-like mitchondrion-as... 51 4e-06
gi|117168279 ovary-specific acidic protein [Homo sapiens] 45 1e-04
gi|50301238 glutathione reductase [Homo sapiens] 40 0.008
gi|51036596 pyridine nucleotide-disulphide oxidoreductase domain... 38 0.031
gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo sap... 36 0.091
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 36 0.12
gi|65301141 PH domain and leucine rich repeat protein phosphatas... 33 0.59
gi|145199237 transcription elongation factor B polypeptide 3 bin... 33 0.77
gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo ... 33 1.0
gi|21314600 carcinoembryonic antigen-related cell adhesion molec... 32 2.2
gi|103472011 ubiquitin-conjugating enzyme E2-like isoform a [Hom... 31 3.8
gi|103472015 ubiquitin-conjugating enzyme E2-like isoform b [Hom... 31 3.8
gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo ... 30 6.5
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 30 6.5
gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo ... 30 8.5
gi|4503571 enolase 1 [Homo sapiens] 30 8.5
gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo sap... 30 8.5
gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens] 30 8.5
>gi|4757732 programmed cell death 8 isoform 1 [Homo sapiens]
Length = 613
Score = 1217 bits (3149), Expect = 0.0
Identities = 613/613 (100%), Positives = 613/613 (100%)
Query: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS
Sbjct: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
Query: 61 GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG 120
GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG
Sbjct: 61 GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG 120
Query: 121 EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW 180
EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW
Sbjct: 121 EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW 180
Query: 181 FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD 240
FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD
Sbjct: 181 FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD 240
Query: 241 NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV 300
NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV
Sbjct: 241 NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV 300
Query: 301 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREG 360
KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREG
Sbjct: 301 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREG 360
Query: 361 VKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGG 420
VKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGG
Sbjct: 361 VKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGG 420
Query: 421 FRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQS 480
FRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQS
Sbjct: 421 FRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQS 480
Query: 481 MFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASE 540
MFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASE
Sbjct: 481 MFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASE 540
Query: 541 ITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHED 600
ITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHED
Sbjct: 541 ITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHED 600
Query: 601 LNEVAKLFNIHED 613
LNEVAKLFNIHED
Sbjct: 601 LNEVAKLFNIHED 613
>gi|22202629 programmed cell death 8 isoform 2 [Homo sapiens]
Length = 609
Score = 1141 bits (2952), Expect = 0.0
Identities = 584/614 (95%), Positives = 590/614 (96%), Gaps = 6/614 (0%)
Query: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP + Q H+ +R +AS+GAS
Sbjct: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP--VVQSHHLG---SPSRSLASTGAS 55
Query: 61 GGKIDNSVLVLIVGLSTVGAGAY-AYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASE 119
G N V LIVG + GAG Y AYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASE
Sbjct: 56 GKDGSNLVYFLIVGATVTGAGVYYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASE 115
Query: 120 GEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKEL 179
GEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKEL
Sbjct: 116 GEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKEL 175
Query: 180 WFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVR 239
WFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVR
Sbjct: 176 WFSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVR 235
Query: 240 DNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISRE 299
DNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISRE
Sbjct: 236 DNMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISRE 295
Query: 300 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRRE 359
VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRRE
Sbjct: 296 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRRE 355
Query: 360 GVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFG 419
GVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFG
Sbjct: 356 GVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFG 415
Query: 420 GFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQ 479
GFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQ
Sbjct: 416 GFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQ 475
Query: 480 SMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEAS 539
SMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEAS
Sbjct: 476 SMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSESETESEAS 535
Query: 540 EITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHE 599
EITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHE
Sbjct: 536 EITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHE 595
Query: 600 DLNEVAKLFNIHED 613
DLNEVAKLFNIHED
Sbjct: 596 DLNEVAKLFNIHED 609
>gi|195927006 programmed cell death 8 isoform 5 [Homo sapiens]
Length = 324
Score = 637 bits (1644), Expect = 0.0
Identities = 322/322 (100%), Positives = 322/322 (100%)
Query: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS
Sbjct: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGAS 60
Query: 61 GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG 120
GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG
Sbjct: 61 GGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEG 120
Query: 121 EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW 180
EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW
Sbjct: 121 EEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELW 180
Query: 181 FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD 240
FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD
Sbjct: 181 FSDDPNVTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRD 240
Query: 241 NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV 300
NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV
Sbjct: 241 NMVKLNDGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREV 300
Query: 301 KSITIIGGGFLGSELACALGRK 322
KSITIIGGGFLGSELACALGRK
Sbjct: 301 KSITIIGGGFLGSELACALGRK 322
>gi|22202631 programmed cell death 8 isoform 3 [Homo sapiens]
Length = 326
Score = 584 bits (1505), Expect = e-167
Identities = 291/291 (100%), Positives = 291/291 (100%)
Query: 323 ARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIK 382
ARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIK
Sbjct: 36 ARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIK 95
Query: 383 LKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACF 442
LKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACF
Sbjct: 96 LKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACF 155
Query: 443 YDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSL 502
YDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSL
Sbjct: 156 YDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSL 215
Query: 503 PTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGK 562
PTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGK
Sbjct: 216 PTVGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGEDYGK 275
Query: 563 GVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHEDLNEVAKLFNIHED 613
GVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHEDLNEVAKLFNIHED
Sbjct: 276 GVIFYLRDKVVVGIVLWNIFNRMPIARKIIKDGEQHEDLNEVAKLFNIHED 326
Score = 74.3 bits (181), Expect = 3e-13
Identities = 35/35 (100%), Positives = 35/35 (100%)
Query: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP 35
MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP
Sbjct: 1 MFRCGGLAAGALKQKLVPLVRTVCVRSPRQRNRLP 35
>gi|195927004 programmed cell death 8 isoform 4 [Homo sapiens]
Length = 261
Score = 523 bits (1347), Expect = e-148
Identities = 261/261 (100%), Positives = 261/261 (100%)
Query: 353 MEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGL 412
MEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGL
Sbjct: 1 MEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGL 60
Query: 413 EIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGA 472
EIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGA
Sbjct: 61 EIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGA 120
Query: 473 AKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSES 532
AKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSES
Sbjct: 121 AKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVGVFAKATAQDNPKSATEQSGTGIRSES 180
Query: 533 ETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKII 592
ETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKII
Sbjct: 181 ETESEASEITIPPSTPAVPQAPVQGEDYGKGVIFYLRDKVVVGIVLWNIFNRMPIARKII 240
Query: 593 KDGEQHEDLNEVAKLFNIHED 613
KDGEQHEDLNEVAKLFNIHED
Sbjct: 241 KDGEQHEDLNEVAKLFNIHED 261
>gi|226437568 apoptosis-inducing factor, mitochondrion-associated, 3
isoform 3 [Homo sapiens]
Length = 604
Score = 112 bits (281), Expect = 8e-25
Identities = 113/413 (27%), Positives = 178/413 (43%), Gaps = 51/413 (12%)
Query: 83 YAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTA 142
+ ++ E EK Y R S L +++ K A S P S L++G G A
Sbjct: 158 HKFQVKIEKEKVY-VRASKQALQLQRRTKVMAKCIS-----PSAGYSSSTNVLIVGAGAA 211
Query: 143 AFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERS 202
A ++R R+++ + D LPY RP LSK L + +
Sbjct: 212 GLVCAETLRQEGFSDRIVLCTLDRHLPYDRPKLSKSL-----------------DTQPEQ 254
Query: 203 IYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGG 262
+ +P F+ + G+ VLT +VV +DVR V DG ++ Y K L+A G
Sbjct: 255 LALRPKEFFRAY---------GIEVLTEAQVVTVDVRTKKVVFKDGFKLEYSKLLLAPGS 305
Query: 263 TPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRK 322
+P++LS G EV++ T+ R D + +++R +++ ++G GFLG E+A L K
Sbjct: 306 SPKTLSC---KGKEVENVFTI-RTPEDANRVVRLARG-RNVVVVGAGFLGMEVAAYLTEK 360
Query: 323 ARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLL-I 381
A ++ V++L E+ + L E + M+ VK V + GKL +
Sbjct: 361 AHSV--SVVEL--EETPFRRFLGERVGRALMKMFENNRVKFYMQTEVSELRGQEGKLKEV 416
Query: 382 KLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA 440
LK + V D V +G P + G+ +DS G VN +Q ++ AGDA
Sbjct: 417 VLKSSKVVRADVCVVGIGAVPATGFLRQSGIGLDSR-GFIPVNKMMQTNVPGVFAAGDAV 475
Query: 441 CFYDIKLGRRRVE--HHDHAVVSGRLAGENMTG-----AAKPYWHQSMFWSDL 486
F R+V H A GR+A +NM + PY +MF L
Sbjct: 476 TFPLAWRNNRKVNIPHWQMAHAQGRVAAQNMLAQEAEMSTVPYLWTAMFGKSL 528
>gi|65787454 apoptosis-inducing factor, mitochondrion-associated, 3
isoform 2 [Homo sapiens]
Length = 598
Score = 112 bits (281), Expect = 8e-25
Identities = 113/413 (27%), Positives = 178/413 (43%), Gaps = 51/413 (12%)
Query: 83 YAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTA 142
+ ++ E EK Y R S L +++ K A S P S L++G G A
Sbjct: 152 HKFQVKIEKEKVY-VRASKQALQLQRRTKVMAKCIS-----PSAGYSSSTNVLIVGAGAA 205
Query: 143 AFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERS 202
A ++R R+++ + D LPY RP LSK L + +
Sbjct: 206 GLVCAETLRQEGFSDRIVLCTLDRHLPYDRPKLSKSL-----------------DTQPEQ 248
Query: 203 IYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGG 262
+ +P F+ + G+ VLT +VV +DVR V DG ++ Y K L+A G
Sbjct: 249 LALRPKEFFRAY---------GIEVLTEAQVVTVDVRTKKVVFKDGFKLEYSKLLLAPGS 299
Query: 263 TPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRK 322
+P++LS G EV++ T+ R D + +++R +++ ++G GFLG E+A L K
Sbjct: 300 SPKTLSC---KGKEVENVFTI-RTPEDANRVVRLARG-RNVVVVGAGFLGMEVAAYLTEK 354
Query: 323 ARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLL-I 381
A ++ V++L E+ + L E + M+ VK V + GKL +
Sbjct: 355 AHSV--SVVEL--EETPFRRFLGERVGRALMKMFENNRVKFYMQTEVSELRGQEGKLKEV 410
Query: 382 KLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA 440
LK + V D V +G P + G+ +DS G VN +Q ++ AGDA
Sbjct: 411 VLKSSKVVRADVCVVGIGAVPATGFLRQSGIGLDSR-GFIPVNKMMQTNVPGVFAAGDAV 469
Query: 441 CFYDIKLGRRRVE--HHDHAVVSGRLAGENMTG-----AAKPYWHQSMFWSDL 486
F R+V H A GR+A +NM + PY +MF L
Sbjct: 470 TFPLAWRNNRKVNIPHWQMAHAQGRVAAQNMLAQEAEMSTVPYLWTAMFGKSL 522
>gi|21389617 apoptosis-inducing factor, mitochondrion-associated, 3
isoform 1 [Homo sapiens]
Length = 605
Score = 112 bits (281), Expect = 8e-25
Identities = 113/413 (27%), Positives = 178/413 (43%), Gaps = 51/413 (12%)
Query: 83 YAYKTMKEDEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTA 142
+ ++ E EK Y R S L +++ K A S P S L++G G A
Sbjct: 152 HKFQVKIEKEKVY-VRASKQALQLQRRTKVMAKCIS-----PSAGYSSSTNVLIVGAGAA 205
Query: 143 AFAAARSIRARDPGARVLIVSEDPELPYMRPPLSKELWFSDDPNVTKTLRFKQWNGKERS 202
A ++R R+++ + D LPY RP LSK L + +
Sbjct: 206 GLVCAETLRQEGFSDRIVLCTLDRHLPYDRPKLSKSL-----------------DTQPEQ 248
Query: 203 IYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLIATGG 262
+ +P F+ + G+ VLT +VV +DVR V DG ++ Y K L+A G
Sbjct: 249 LALRPKEFFRAY---------GIEVLTEAQVVTVDVRTKKVVFKDGFKLEYSKLLLAPGS 299
Query: 263 TPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGRK 322
+P++LS G EV++ T+ R D + +++R +++ ++G GFLG E+A L K
Sbjct: 300 SPKTLSC---KGKEVENVFTI-RTPEDANRVVRLARG-RNVVVVGAGFLGMEVAAYLTEK 354
Query: 323 ARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLL-I 381
A ++ V++L E+ + L E + M+ VK V + GKL +
Sbjct: 355 AHSV--SVVEL--EETPFRRFLGERVGRALMKMFENNRVKFYMQTEVSELRGQEGKLKEV 410
Query: 382 KLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQAR-SNIWVAGDAA 440
LK + V D V +G P + G+ +DS G VN +Q ++ AGDA
Sbjct: 411 VLKSSKVVRADVCVVGIGAVPATGFLRQSGIGLDSR-GFIPVNKMMQTNVPGVFAAGDAV 469
Query: 441 CFYDIKLGRRRVE--HHDHAVVSGRLAGENMTG-----AAKPYWHQSMFWSDL 486
F R+V H A GR+A +NM + PY +MF L
Sbjct: 470 TFPLAWRNNRKVNIPHWQMAHAQGRVAAQNMLAQEAEMSTVPYLWTAMFGKSL 522
>gi|14318424 apoptosis-inducing factor (AIF)-like
mitchondrion-associated inducer of death [Homo sapiens]
Length = 373
Score = 50.8 bits (120), Expect = 4e-06
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 22/218 (10%)
Query: 233 VVQLDVRDNMVKLNDGSQITYEKCLIATGGT---PRSLSAIDRAGAEVKSRTTLFRKIGD 289
VV +D+++ MV L G + + ++ATG T P + + A +++ + R++
Sbjct: 82 VVGIDLKNQMVLLQGGEALPFSHLILATGSTGPFPGKFNEVSSQQAAIQAYEDMVRQV-- 139
Query: 290 FRSLEKISREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKILPEYLS 349
+ + I ++GGG G E+A + K EV + + K L +
Sbjct: 140 --------QRSRFIVVVGGGSAGVEMAAEI--KTEYPEKEVTLIHSQVALADKELLPSVR 189
Query: 350 NWTMEKVRREGVKVMPNAIV---QSVGVSSGKLLIKLK--DGRKVETDHIVAAVGLEPNV 404
E + R+GV+++ + V + + ++ + IK++ G +V T+ ++ G++ N
Sbjct: 190 QEVKEILLRKGVQLLLSERVSNLEELPLNEYREYIKVQTDKGTEVATNLVILCTGIKINS 249
Query: 405 ELAKTGGLEIDSDFGGFRVNAELQ--ARSNIWVAGDAA 440
+ + G RVN LQ SN++ GD A
Sbjct: 250 SAYRKAFESRLASSGALRVNEHLQVEGHSNVYAIGDCA 287
>gi|117168279 ovary-specific acidic protein [Homo sapiens]
Length = 240
Score = 45.4 bits (106), Expect = 1e-04
Identities = 34/122 (27%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 52 RQMASSGASGGKIDNSVLVLIVGLSTVGAGAYAYKTMKEDEKRYNERISGLGLTPEQKQK 111
R+M+S+ G N + L+VG++ G YAYKT+ D+ ++ E + L +++
Sbjct: 31 RRMSSNRFPGSSGSNMIYYLVVGVTVSAGGYYAYKTVTSDQAKHTEHKTNL-----KEKT 85
Query: 112 KAALSASEGEE---VPQDKAPSHVPFLLIGGGTAAFAAARSIRARD-PGARVLIVSEDPE 167
KA + +GE+ +KA S P LI A + A + P A V+++ E
Sbjct: 86 KAEIHPFQGEKENVAETEKASSEAPEELI-------VEAEVVDAEESPSATVVVIKEASA 138
Query: 168 LP 169
P
Sbjct: 139 CP 140
>gi|50301238 glutathione reductase [Homo sapiens]
Length = 522
Score = 39.7 bits (91), Expect = 0.008
Identities = 87/371 (23%), Positives = 137/371 (36%), Gaps = 60/371 (16%)
Query: 104 LTPEQKQKKAALS---ASEGEEVPQDKAPS-----HVPFLLIGGGTAAFAAARSIRARDP 155
L PE ALS A E PQ P+ +L+IGGG+ A+AR RA +
Sbjct: 29 LLPEPAALTRALSRAMACRQEPQPQGPPPAAGAVASYDYLVIGGGSGGLASAR--RAAEL 86
Query: 156 GARVLIVSED------------PELPYMRPPLSKELWFSDD----PNVTKTLRFKQWNGK 199
GAR +V P+ + E P+ ++ K
Sbjct: 87 GARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSCEGKFNWRVIKEK 146
Query: 200 ERSIYFQPPSFYVSAQDLPHIEN-GGVAVLTGKKVVQLDVRDNMVKLNDGSQITYEKCLI 258
+ + + Y + HIE G A T ++V G + T LI
Sbjct: 147 RDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDPKPTIEV--------SGKKYTAPHILI 198
Query: 259 ATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITIIGGGFLGSELACA 318
ATGG P + GA + + G F+ E R V I+G G++ E+A
Sbjct: 199 ATGGMPSTPHESQIPGASLGITSD-----GFFQLEELPGRSV----IVGAGYIAVEMAGI 249
Query: 319 LGRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGK 378
L ALG++ L + + +S E++ GV+V+ + V+ V +
Sbjct: 250 LS----ALGSKT-SLMIRHDKVLRSFDSMISTNCTEELENAGVEVLKFSQVKEVKKTLSG 304
Query: 379 L---LIKLKDGRK------VETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQA 429
L ++ GR + D ++ A+G PN + L I +D G + E Q
Sbjct: 305 LEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPNTKDLSLNKLGIQTDDKGHIIVDEFQN 364
Query: 430 RS--NIWVAGD 438
+ I+ GD
Sbjct: 365 TNVKGIYAVGD 375
>gi|51036596 pyridine nucleotide-disulphide oxidoreductase domain 1
[Homo sapiens]
Length = 500
Score = 37.7 bits (86), Expect = 0.031
Identities = 48/211 (22%), Positives = 79/211 (37%), Gaps = 42/211 (19%)
Query: 129 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPYMR--PPLSKELWFSDDPN 186
P+ F+++GGG A A + P +L+V+ P + + +SK L D
Sbjct: 8 PTAGKFVVVGGGIAGVTCAEQLATHFPSEDILLVTASPVIKAVTNFKQISKILEEFDVEE 67
Query: 187 VTKTLRFKQWNGKERSIYFQPPSFYVSAQDLPHIENGGVAVLTGKKVVQLDVRDNMVKLN 246
+ T+ K++ P+ V IE+G V QL ++ +
Sbjct: 68 QSSTMLGKRF-----------PNIKV-------IESG---------VKQLKSEEHCIVTE 100
Query: 247 DGSQITYEKCLIATGGTPRSLSAIDRAGAEVKSRTTLFRKIGDFRSLEKISREVKSITII 306
DG+Q Y+K + G P+ + E R + +K + K I II
Sbjct: 101 DGNQHVYKKLCLCAGAKPKLI-------CEGNPYVLGIRDTDSAQEFQKQLTKAKRIMII 153
Query: 307 GGGFLGSELACALGRKARALGTEVIQLFPEK 337
G G + EL + G EVI +K
Sbjct: 154 GNGGIALELVYEIE------GCEVIWAIKDK 178
>gi|48255889 protein kinase C substrate 80K-H isoform 1 [Homo
sapiens]
Length = 528
Score = 36.2 bits (82), Expect = 0.091
Identities = 55/251 (21%), Positives = 91/251 (36%), Gaps = 32/251 (12%)
Query: 320 GRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRR-----EGVKVMPNAI--VQSV 372
GRK R ++ ++ E + KIL E EK ++ G K + + + +++V
Sbjct: 120 GRKERESLQQMAEVTREGFRLKKILIEDWKKAREEKQKKLIELQAGKKSLEDQVEMLRTV 179
Query: 373 GVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARSN 432
+ K + K+ + + +AA + ELA E+D D G ELQ
Sbjct: 180 KEEAEKPEREAKEQHQKLWEEQLAAAKAQQEQELAADAFKELDDDMDGTVSVTELQTHPE 239
Query: 433 IWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGY 492
+ GD A A L+G+ T A Y W+ +
Sbjct: 240 LDTDGDGAL--------------SEAEAQALLSGDTQTDATSFY---DRVWAAIRDKYRS 282
Query: 493 EAIGLVDSSLPTVGVFAKATAQDNP-------KSATEQSGTGIRSESETESEASEITIPP 545
EA+ D P+ + + P + E+ +E E E E SE PP
Sbjct: 283 EALP-TDLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEEAPPP 341
Query: 546 STPAVPQAPVQ 556
+P P +P +
Sbjct: 342 LSPPQPASPAE 352
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 35.8 bits (81), Expect = 0.12
Identities = 46/182 (25%), Positives = 73/182 (40%), Gaps = 34/182 (18%)
Query: 394 IVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARSNIWVAGDAACFYDIKLGRRRVE 453
+V A P ++++KT +S R+ L++RS AA +L ++ +E
Sbjct: 1824 LVDAAASAPQMDVSKTK----ESKHEAARLEENLRSRS-------AAVSEQQQLEQKTLE 1872
Query: 454 HHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGYEAIGLVDSSLPTVG------- 506
+V L + + KP H S+ +S+ G D G + L T G
Sbjct: 1873 VEKRSVQC--LYTSSAFPSGKPQPHSSVVYSEAGKDKGPPPKSRYEEELRTRGKTTITAA 1930
Query: 507 -----VFAKATAQDNPKSATEQSGTGIRSES-------ETESEASEITIPPSTPAVPQAP 554
+ + A D K A E+ S S ET S+A E+ P S+PA PQ
Sbjct: 1931 NFIDVIITRQIASD--KDARERGSQSSDSSSSLSSHRYETPSDAIEVISPASSPAPPQEK 1988
Query: 555 VQ 556
+Q
Sbjct: 1989 LQ 1990
>gi|65301141 PH domain and leucine rich repeat protein
phosphatase-like [Homo sapiens]
Length = 1323
Score = 33.5 bits (75), Expect = 0.59
Identities = 19/55 (34%), Positives = 27/55 (49%)
Query: 505 VGVFAKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGED 559
VG + T +D PK AT S +GI SE +E SE++ + A + G D
Sbjct: 1053 VGFASTTTIKDAPKPATPSSSSGIASEFSSEMSTSEVSSEVGSTASDEHNAGGLD 1107
>gi|145199237 transcription elongation factor B polypeptide 3
binding protein 1 [Homo sapiens]
Length = 1221
Score = 33.1 bits (74), Expect = 0.77
Identities = 18/54 (33%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Query: 510 KATAQDNPKSATEQSGTGIRSESET--ESEASEITIPPSTPAVPQAPVQGEDYG 561
KAT Q K E G G+R ET + + ++ PP+ PA P +D G
Sbjct: 316 KATGQPPSKEGLEAEGGGLRETKETAVQCDVGDLQPPPAKPASPAQVQSSQDGG 369
>gi|239747100 PREDICTED: hypothetical protein XP_002344493 [Homo
sapiens]
Length = 300
Score = 32.7 bits (73), Expect = 1.0
Identities = 17/49 (34%), Positives = 22/49 (44%)
Query: 107 EQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTAAFAAARSIRARDP 155
E+ +++ A SE D PS P + GG AA AA R R P
Sbjct: 214 EEAREERARGCSEASRTSSDSGPSRAPAARVVGGEAAATAAARARPRAP 262
>gi|21314600 carcinoembryonic antigen-related cell adhesion molecule
8 [Homo sapiens]
Length = 349
Score = 31.6 bits (70), Expect = 2.2
Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 6/94 (6%)
Query: 26 RSPRQRNRLPGNLFQRWHVPLELQMTRQMASSGASGGKIDNSVLVLIVGLSTVGAGAYAY 85
R P Q L +LF W+ P Q+T + S A+ GK VL+L+ L G Y
Sbjct: 12 RIPWQGLLLTASLFTFWNPPTTAQLTIEAVPSNAAEGK---EVLLLVHNLPQDPRGYNWY 68
Query: 86 KTMKEDEKRYNERISGLGLTPEQKQKKAALSASE 119
K D N RI G ++ +Q A S E
Sbjct: 69 KGETVDA---NRRIIGYVISNQQITPGPAYSNRE 99
>gi|103472011 ubiquitin-conjugating enzyme E2-like isoform a [Homo
sapiens]
Length = 471
Score = 30.8 bits (68), Expect = 3.8
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 297 SREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG 341
++ V IT++GGG LG +AC L A+ + ++ L +G G
Sbjct: 179 NKTVNKITVVGGGELG--IACTLAISAKGIADRLVLLDLSEGTKG 221
>gi|103472015 ubiquitin-conjugating enzyme E2-like isoform b [Homo
sapiens]
Length = 379
Score = 30.8 bits (68), Expect = 3.8
Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 297 SREVKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG 341
++ V IT++GGG LG +AC L A+ + ++ L +G G
Sbjct: 179 NKTVNKITVVGGGELG--IACTLAISAKGIADRLVLLDLSEGTKG 221
>gi|56549653 neuro-oncological ventral antigen 1 isoform 1 [Homo
sapiens]
Length = 507
Score = 30.0 bits (66), Expect = 6.5
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 54 MASSGASGGKI--DNSVLVLIVGL--STVGA-----GAYAYKTMKEDEKRYNERISGLGL 104
M +S A+ KI NS LI+G +TV A GA+ + K D ER+ +
Sbjct: 166 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSG 225
Query: 105 TPEQKQKKAALSASEGEEVPQDKAPSHVPFLLIGGGTA 142
PEQ +K L + +E PQ + ++ + + G A
Sbjct: 226 EPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVA 263
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 30.0 bits (66), Expect = 6.5
Identities = 17/51 (33%), Positives = 23/51 (45%)
Query: 509 AKATAQDNPKSATEQSGTGIRSESETESEASEITIPPSTPAVPQAPVQGED 559
A+ATA + E+ G G R E E E + + T P A QG+D
Sbjct: 132 AEATAGSGGVNGGEEQGLGKREEDEPEERSGDETPGSEVPGDKAAEEQGDD 182
>gi|56549651 neuro-oncological ventral antigen 1 isoform 2 [Homo
sapiens]
Length = 483
Score = 29.6 bits (65), Expect = 8.5
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 7/86 (8%)
Query: 64 IDNSVLVLIVGL--STVGA-----GAYAYKTMKEDEKRYNERISGLGLTPEQKQKKAALS 116
+ NS LI+G +TV A GA+ + K D ER+ + PEQ +K L
Sbjct: 154 VPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPDGINLQERVVTVSGEPEQNRKAVELI 213
Query: 117 ASEGEEVPQDKAPSHVPFLLIGGGTA 142
+ +E PQ + ++ + + G A
Sbjct: 214 IQKIQEDPQSGSCLNISYANVTGPVA 239
>gi|4503571 enolase 1 [Homo sapiens]
Length = 434
Score = 29.6 bits (65), Expect = 8.5
Identities = 47/194 (24%), Positives = 76/194 (39%), Gaps = 36/194 (18%)
Query: 244 KLNDGSQITYEKCLIATGGTPRSLS-----------AIDRAGAEVKSRTTLFRKIGDFRS 292
KLN Q +K +I GT A+ +AGA V+ L+R I D
Sbjct: 81 KLNVTEQEKIDKLMIEMDGTENKSKFGANAILGVSLAVCKAGA-VEKGVPLYRHIADLAG 139
Query: 293 LEKISREVKSITII-GGGFLGSELA----------CALGRKARALGTEVIQLFPEKGNMG 341
++ V + +I GG G++LA A R+A +G EV N+
Sbjct: 140 NSEVILPVPAFNVINGGSHAGNKLAMQEFMILPVGAANFREAMRIGAEVYH------NLK 193
Query: 342 KILPEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLE 401
++ E V EG PN + G+ L+K G+ TD +V + +
Sbjct: 194 NVIKEKYGK-DATNVGDEG-GFAPNILENKEGLE----LLKTAIGKAGYTDKVVIGMDVA 247
Query: 402 PNVELAKTGGLEID 415
+ E ++G ++D
Sbjct: 248 AS-EFFRSGKYDLD 260
>gi|48255891 protein kinase C substrate 80K-H isoform 2 [Homo
sapiens]
Length = 525
Score = 29.6 bits (65), Expect = 8.5
Identities = 53/246 (21%), Positives = 87/246 (35%), Gaps = 32/246 (13%)
Query: 320 GRKARALGTEVIQLFPEKGNMGKILPEYLSNWTMEKVRR-----EGVKVMPNAI--VQSV 372
GRK R ++ ++ E + KIL E EK ++ G K + + + +++V
Sbjct: 120 GRKERESLQQMAEVTREGFRLKKILIEDWKKAREEKQKKLIELQAGKKSLEDQVEMLRTV 179
Query: 373 GVSSGKLLIKLKDGRKVETDHIVAAVGLEPNVELAKTGGLEIDSDFGGFRVNAELQARSN 432
+ K + K+ + + +AA + ELA E+D D G ELQ
Sbjct: 180 KEEAEKPEREAKEQHQKLWEEQLAAAKAQQEQELAADAFKELDDDMDGTVSVTELQTHPE 239
Query: 433 IWVAGDAACFYDIKLGRRRVEHHDHAVVSGRLAGENMTGAAKPYWHQSMFWSDLGPDVGY 492
+ GD A A L+G+ T A Y W+ +
Sbjct: 240 LDTDGDGAL--------------SEAEAQALLSGDTQTDATSFY---DRVWAAIRDKYRS 282
Query: 493 EAIGLVDSSLPTVGVFAKATAQDNP-------KSATEQSGTGIRSESETESEASEITIPP 545
EA+ D P+ + + P + E+ +E E E E SE+
Sbjct: 283 EALP-TDLPAPSAPDLTEPKEEQPPVPSSPTEEEEEEEEEEEEEAEEEEEEEDSEVQGEQ 341
Query: 546 STPAVP 551
PA P
Sbjct: 342 PKPASP 347
>gi|166197658 butyrophilin, subfamily 1, member A1 [Homo sapiens]
Length = 526
Score = 29.6 bits (65), Expect = 8.5
Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 11/89 (12%)
Query: 67 SVLVLIVGLSTVGAGAYAYKTMKE-DEKRYNERISGLGLTPEQKQKKAALSASEGEEVPQ 125
+V+++++GL T+G+ + ++ E +R NE S L E K KKA L A +V
Sbjct: 251 AVILMVLGLLTIGSIFFTWRLYNERPRERRNEFSSKERLLEELKWKKATLHA---VDVTL 307
Query: 126 DKAPSHVPFLLIGGGTAAFAAARSIRARD 154
D +H P L + + ++S+R D
Sbjct: 308 DPDTAH-PHLFL------YEDSKSVRLED 329
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.135 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,115,546
Number of Sequences: 37866
Number of extensions: 1035618
Number of successful extensions: 3307
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 3276
Number of HSP's gapped (non-prelim): 33
length of query: 613
length of database: 18,247,518
effective HSP length: 108
effective length of query: 505
effective length of database: 14,157,990
effective search space: 7149784950
effective search space used: 7149784950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.