Guide to the Human Genome
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Search of human proteins with 46410929

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|46410929 solute carrier family 43, member 3 [Homo sapiens]
         (491 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|46410929 solute carrier family 43, member 3 [Homo sapiens]         988   0.0  
gi|41056259 solute carrier family 43, member 3 [Homo sapiens]         988   0.0  
gi|18252047 solute carrier family 43, member 3 [Homo sapiens]         988   0.0  
gi|22748751 solute carrier family 43, member 2 [Homo sapiens]         206   5e-53
gi|4505971 solute carrier family 43, member 1 [Homo sapiens]          187   2e-47
gi|39777594 solute carrier organic anion transporter family memb...    33   0.59 
gi|113462010 casein kinase 1, gamma 3 isoform 4 [Homo sapiens]         32   1.3  
gi|113462008 casein kinase 1, gamma 3 isoform 3 [Homo sapiens]         32   1.3  
gi|98986450 casein kinase 1, gamma 1 [Homo sapiens]                    32   1.3  
gi|73532780 casein kinase 1, gamma 3 isoform 2 [Homo sapiens]          32   1.3  
gi|73532778 casein kinase 1, gamma 3 isoform 1 [Homo sapiens]          32   1.3  
gi|185136021 spinster homolog 2 [Homo sapiens]                         32   1.7  
gi|239749902 PREDICTED: similar to hCG2040253 [Homo sapiens]           31   2.2  
gi|239744202 PREDICTED: similar to hCG2040253 [Homo sapiens]           31   2.2  
gi|21624639 casein kinase 1, alpha 1-like [Homo sapiens]               31   2.9  
gi|153791733 casein kinase 1, gamma 2 [Homo sapiens]                   30   3.8  
gi|4502359 brain-specific angiogenesis inhibitor 3 [Homo sapiens]      30   6.5  
gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sap...    29   8.5  
gi|62244004 modulator of estrogen induced transcription isoform ...    29   8.5  
gi|63176611 modulator of estrogen induced transcription isoform ...    29   8.5  

>gi|46410929 solute carrier family 43, member 3 [Homo sapiens]
          Length = 491

 Score =  988 bits (2553), Expect = 0.0
 Identities = 491/491 (100%), Positives = 491/491 (100%)

Query: 1   MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQ 60
           MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQ
Sbjct: 1   MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQ 60

Query: 61  ADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA 120
           ADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA
Sbjct: 61  ADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA 120

Query: 121 GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLY 180
           GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLY
Sbjct: 121 GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLY 180

Query: 181 EKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAE 240
           EKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAE
Sbjct: 181 EKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAE 240

Query: 241 HENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTL 300
           HENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTL
Sbjct: 241 HENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTL 300

Query: 301 NSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAV 360
           NSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAV
Sbjct: 301 NSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAV 360

Query: 361 ALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSE 420
           ALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSE
Sbjct: 361 ALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSE 420

Query: 421 HFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYREC 480
           HFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYREC
Sbjct: 421 HFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYREC 480

Query: 481 RTWKESPSAIA 491
           RTWKESPSAIA
Sbjct: 481 RTWKESPSAIA 491


>gi|41056259 solute carrier family 43, member 3 [Homo sapiens]
          Length = 491

 Score =  988 bits (2553), Expect = 0.0
 Identities = 491/491 (100%), Positives = 491/491 (100%)

Query: 1   MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQ 60
           MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQ
Sbjct: 1   MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQ 60

Query: 61  ADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA 120
           ADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA
Sbjct: 61  ADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA 120

Query: 121 GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLY 180
           GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLY
Sbjct: 121 GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLY 180

Query: 181 EKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAE 240
           EKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAE
Sbjct: 181 EKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAE 240

Query: 241 HENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTL 300
           HENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTL
Sbjct: 241 HENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTL 300

Query: 301 NSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAV 360
           NSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAV
Sbjct: 301 NSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAV 360

Query: 361 ALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSE 420
           ALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSE
Sbjct: 361 ALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSE 420

Query: 421 HFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYREC 480
           HFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYREC
Sbjct: 421 HFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYREC 480

Query: 481 RTWKESPSAIA 491
           RTWKESPSAIA
Sbjct: 481 RTWKESPSAIA 491


>gi|18252047 solute carrier family 43, member 3 [Homo sapiens]
          Length = 491

 Score =  988 bits (2553), Expect = 0.0
 Identities = 491/491 (100%), Positives = 491/491 (100%)

Query: 1   MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQ 60
           MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQ
Sbjct: 1   MAGQGLPLHVATLLTGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQ 60

Query: 61  ADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA 120
           ADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA
Sbjct: 61  ADCKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA 120

Query: 121 GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLY 180
           GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLY
Sbjct: 121 GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLY 180

Query: 181 EKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAE 240
           EKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAE
Sbjct: 181 EKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGLCPGNGTTKEEKETAE 240

Query: 241 HENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTL 300
           HENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTL
Sbjct: 241 HENRELQSKEFLSAKEETPGAGQKQELRSFWSYAFSRRFAWHLVWLSVIQLWHYLFIGTL 300

Query: 301 NSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAV 360
           NSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAV
Sbjct: 301 NSLLTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAV 360

Query: 361 ALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSE 420
           ALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSE
Sbjct: 361 ALCSTVPSLALTSLLCLGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSE 420

Query: 421 HFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYREC 480
           HFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYREC
Sbjct: 421 HFGKLFGLVMALSAVVSLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHPFLVYREC 480

Query: 481 RTWKESPSAIA 491
           RTWKESPSAIA
Sbjct: 481 RTWKESPSAIA 491


>gi|22748751 solute carrier family 43, member 2 [Homo sapiens]
          Length = 569

 Score =  206 bits (523), Expect = 5e-53
 Identities = 160/515 (31%), Positives = 239/515 (46%), Gaps = 56/515 (10%)

Query: 15  TGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCG-PDAGPIGNATGQAD----------- 62
           T +LE L F+ VL GW SL+ + K+E ++  LC  P+    G   G A+           
Sbjct: 18  TAVLENLLFSAVLLGWGSLLIMLKSEGFYSYLCTEPENVTNGTVGGTAEPGHEEVSWMNG 77

Query: 63  ---CKAQDERFSLIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTS 119
              C+AQDE  +L FT+GSF+ + +T P G + D++     RL+    +  + L+IA+ +
Sbjct: 78  WLSCQAQDEMLNLAFTVGSFLLSAITLPLGIVMDKYGPRKLRLLGSACFAVSCLLIAYGA 137

Query: 120 A---GSAVLLFLAMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLII 176
           +     +VL+F+A+ +   GG+    T+L + N+FG  RST I L  G++ SS+  F  I
Sbjct: 138 SKPNALSVLIFIALALNGFGGMCMTFTSLTLPNMFGDLRSTFIALMIGSYASSAVTFPGI 197

Query: 177 KLLYEKGISLRASFIFISVCSTWHVARTFLLMPRGHIPYPLPPNYSYGL------CPGNG 230
           KL+Y+ G+S     +  + CS       F   P    P P   +YS  +           
Sbjct: 198 KLIYDAGVSFIVVLVVWAGCSGLVFLNCFFNWPLEPFPGPEDMDYSVKIKFSWLGFDHKI 257

Query: 231 TTKEEKETAEHENRELQ-SKEFLSAKEETP-GAGQKQELR----------------SFWS 272
           T K+  +      R L       SAKE+     G K  L                 SF  
Sbjct: 258 TGKQFYKQVTTVGRRLSVGSSMRSAKEQVALQEGHKLCLSTVDLEVKCQPDAAVAPSFMH 317

Query: 273 YAFSRRFAWHLVWLSVIQLWHYLFIGTLNSLLTNMAGGDMARVSTYTNAFAFTQ-FGVLC 331
             FS      LV + V QL    ++G +N++L  +  GD   V  YT+ F   Q   +L 
Sbjct: 318 SVFSPILLLSLVTMCVTQLRLIFYMGAMNNILKFLVSGDQKTVGLYTSIFGVLQLLCLLT 377

Query: 332 APWNGLLMD-RLKQ------------KYQKEARKTGSSTLAVALCSTVPSLALTSLLCLG 378
           AP  G +MD RLK+              Q E +K         + + + + A T+LL +G
Sbjct: 378 APVIGYIMDWRLKECEDASEEPEEKDANQGEKKKKKRDRQIQKITNAMRAFAFTNLLLVG 437

Query: 379 FALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSEHFGKLFGLVMALSAVVSL 438
           F +   +P LPLQ L+FIL  I R F++ +        +PS  FG L GL   +SA+ +L
Sbjct: 438 FGVTCLIPNLPLQILSFILHTIVRGFIHSAVGGLYAAVYPSTQFGSLTGLQSLISALFAL 497

Query: 439 LQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHP 473
           LQ P+F  + G LQ DP +VNV  +L  LL F  P
Sbjct: 498 LQQPLFLAMMGPLQGDPLWVNVGLLLLSLLGFCLP 532


>gi|4505971 solute carrier family 43, member 1 [Homo sapiens]
          Length = 559

 Score =  187 bits (475), Expect = 2e-47
 Identities = 151/530 (28%), Positives = 241/530 (45%), Gaps = 66/530 (12%)

Query: 15  TGLLECLGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAGPIGNATGQA---DCKAQDERFS 71
           T +LE L F+ VL GW SL+ + KNE ++   C  ++        Q     C  QDE  +
Sbjct: 18  TAVLENLFFSAVLLGWGSLLIILKNEGFYSSTCPAESSTNTTQDEQRRWPGCDQQDEMLN 77

Query: 72  LIFTLGSFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSA---GSAVLLFL 128
           L FT+GSF+ +  T P G + DRF     RL+    +T +  ++A  S      + L+FL
Sbjct: 78  LGFTIGSFVLSATTLPLGILMDRFGPRPVRLVGSACFTASCTLMALASRDVEALSPLIFL 137

Query: 129 AMPMLTIGGILFLITNLQIGNLFGQHRSTIITLYNGAFDSSSAVFLIIKLLYEKGISLRA 188
           A+ +   GGI    T+L + N+FG  RST++ L  G++ SS+  F  IKL+Y+ G++   
Sbjct: 138 ALSLNGFGGICLTFTSLTLPNMFGNLRSTLMALMIGSYASSAITFPGIKLIYDAGVA--- 194

Query: 189 SFIFISVCSTWHVARTFLLM------PRGHIPYPLPPNYSY---------------GLCP 227
              F+ +  TW      + +      P    P P   NY+                 L  
Sbjct: 195 ---FVVIMFTWSGLACLIFLNCTLNWPIEAFPAPEEVNYTKKIKLSGLALDHKVTGDLFY 251

Query: 228 GNGTTKEEKETAEHENRELQSKEFLSAKEETPGAGQKQELRS--FWSYAFSRRFAWHLVW 285
            + TT  ++ + +  + E  S  F+S  ++  G  +    RS        S  F W L+ 
Sbjct: 252 THVTTMGQRLSQKAPSLEDGSDAFMSP-QDVRGTSENLPERSVPLRKSLCSPTFLWSLLT 310

Query: 286 LSVIQLWHYLFIGTLNSLLTNMAGGDMAR------------VSTYTNAFAFTQF-GVLCA 332
           + + QL    ++  +N +L  +  G                V  Y++ F   Q   +L  
Sbjct: 311 MGMTQLRIIFYMAAVNKMLEYLVTGGQEHETNEQQQKVAETVGFYSSVFGAMQLLCLLTC 370

Query: 333 PWNGLLMD-RLKQKYQKEARKT-------GSSTLAVA--------LCSTVPSLALTSLLC 376
           P  G +MD R+K       + T       G +T ++         L + + +  LT+LL 
Sbjct: 371 PLIGYIMDWRIKDCVDAPTQGTVLGDARDGVATKSIRPRYCKIQKLTNAISAFTLTNLLL 430

Query: 377 LGFALCASVPILPLQYLTFILQVISRSFLYGSNAAFLTLAFPSEHFGKLFGLVMALSAVV 436
           +GF +   +  L LQ++TF+L  I R F + +  +     FPS HFG L GL   +SAV 
Sbjct: 431 VGFGITCLINNLHLQFVTFVLHTIVRGFFHSACGSLYAAVFPSNHFGTLTGLQSLISAVF 490

Query: 437 SLLQFPIFTLIKGSLQNDPFYVNVMFMLAILLTFFHP-FLVYRECRTWKE 485
           +LLQ P+F  + G L+ +PF+VN+  +L  LL F  P +L Y   R  +E
Sbjct: 491 ALLQQPLFMAMVGPLKGEPFWVNLGLLLFSLLGFLLPSYLFYYRARLQQE 540


>gi|39777594 solute carrier organic anion transporter family member
           4A1 [Homo sapiens]
          Length = 722

 Score = 33.1 bits (74), Expect = 0.59
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 9/102 (8%)

Query: 21  LGFAGVLFGWPSLVFVFKNEDYFKDLCGPDAG----PIGNATGQADCKAQDERFSLIFTL 76
           LG+  +L G  SLVF   +    +     DAG    P       AD  +   R+ L+F L
Sbjct: 173 LGWGVLLMGTGSLVFALPHFTAGRYEVELDAGVRTCPANPGAVCADSTSGLSRYQLVFML 232

Query: 77  GSFMNN-----FMTFPTGYIFDRFKTTVARLIAIFFYTTATL 113
           G F++        T    Y+ +  K++ + +    FYT A L
Sbjct: 233 GQFLHGVGATPLYTLGVTYLDENVKSSCSPVYIAIFYTAAIL 274


>gi|113462010 casein kinase 1, gamma 3 isoform 4 [Homo sapiens]
          Length = 455

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 333 PWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLA 370
           PW GL  D LK++YQK    T  +T    LC   P +A
Sbjct: 248 PWQGLKADTLKERYQK-IGDTKRATPIEVLCENFPEMA 284


>gi|113462008 casein kinase 1, gamma 3 isoform 3 [Homo sapiens]
          Length = 415

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 333 PWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLA 370
           PW GL  D LK++YQK    T  +T    LC   P +A
Sbjct: 248 PWQGLKADTLKERYQK-IGDTKRATPIEVLCENFPEMA 284


>gi|98986450 casein kinase 1, gamma 1 [Homo sapiens]
          Length = 422

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 18/42 (42%), Positives = 21/42 (50%), Gaps = 1/42 (2%)

Query: 333 PWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLALTSL 374
           PW GL  D LK++YQK    T  +T   ALC   P    T L
Sbjct: 250 PWQGLKADTLKERYQK-IGDTKRNTPIEALCENFPEEMATYL 290


>gi|73532780 casein kinase 1, gamma 3 isoform 2 [Homo sapiens]
          Length = 423

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 333 PWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLA 370
           PW GL  D LK++YQK    T  +T    LC   P +A
Sbjct: 248 PWQGLKADTLKERYQK-IGDTKRATPIEVLCENFPEMA 284


>gi|73532778 casein kinase 1, gamma 3 isoform 1 [Homo sapiens]
          Length = 447

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 333 PWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLA 370
           PW GL  D LK++YQK    T  +T    LC   P +A
Sbjct: 248 PWQGLKADTLKERYQK-IGDTKRATPIEVLCENFPEMA 284


>gi|185136021 spinster homolog 2 [Homo sapiens]
          Length = 549

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 89  GYIFDRFKTTVARLIAIFFYTTATLIIAFTSAGSAVLLFLAMPMLTIGGILF-LITNLQI 147
           GY+ DRF   V     IFF++  T   +F       LL L+  ++ IG   +  I    I
Sbjct: 159 GYLGDRFNRKVILSCGIFFWSAVTFSSSFIPQQYFWLLVLSRGLVGIGEASYSTIAPTII 218

Query: 148 GNLFGQHRSTII 159
           G+LF ++  T++
Sbjct: 219 GDLFTKNTRTLM 230


>gi|239749902 PREDICTED: similar to hCG2040253 [Homo sapiens]
          Length = 251

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 224 GLCPGNGTTKEEKETAEHENRELQSK--EFLSAKEETPG 260
           G C   GT +E K  A  E++E Q+K  E  +A EE PG
Sbjct: 125 GACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPG 163


>gi|239744202 PREDICTED: similar to hCG2040253 [Homo sapiens]
          Length = 251

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 224 GLCPGNGTTKEEKETAEHENRELQSK--EFLSAKEETPG 260
           G C   GT +E K  A  E++E Q+K  E  +A EE PG
Sbjct: 125 GACSNKGTAQERKAAATPESQEPQAKGAEGNAASEEAPG 163


>gi|21624639 casein kinase 1, alpha 1-like [Homo sapiens]
          Length = 337

 Score = 30.8 bits (68), Expect = 2.9
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 1/47 (2%)

Query: 322 FAFTQFGVLCAPWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPS 368
           + F  F     PW GL     KQKY+K + K  S+ + V LC   P+
Sbjct: 209 YVFMYFNRTSLPWQGLKAMTKKQKYEKISEKKMSTPVEV-LCKGFPA 254


>gi|153791733 casein kinase 1, gamma 2 [Homo sapiens]
          Length = 415

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 1/42 (2%)

Query: 333 PWNGLLMDRLKQKYQKEARKTGSSTLAVALCSTVPSLALTSL 374
           PW GL  D LK++YQK    T  +T    LC   P    T L
Sbjct: 251 PWQGLKADTLKERYQK-IGDTKRATPIEVLCENFPEEMATYL 291


>gi|4502359 brain-specific angiogenesis inhibitor 3 [Homo sapiens]
          Length = 1522

 Score = 29.6 bits (65), Expect = 6.5
 Identities = 32/132 (24%), Positives = 57/132 (43%), Gaps = 21/132 (15%)

Query: 282  HLVWLSVIQLWHYLFIGTLNSL-LTNMAGGDMARVSTYTNAFAFTQFGVLCAPWNGLLMD 340
            H  WLS+     Y F+G   ++ L NM  G +              F  L +  +G+L  
Sbjct: 1011 HYCWLSLEGGLLYAFVGPAAAVVLVNMVIGILV-------------FNKLVSR-DGILDK 1056

Query: 341  RLKQKYQKEARKTGSSTLAVALCSTVPSLALTSLLCLG-----FALCASVPILPLQYLTF 395
            +LK +  + +      TL  A C  V + AL++          ++ C  +P+L L +++ 
Sbjct: 1057 KLKHRAGQMSEPHSGLTLKCAKCGVVSTTALSATTASNAMASLWSSCVVLPLLALTWMSA 1116

Query: 396  ILQVI-SRSFLY 406
            +L +   RS L+
Sbjct: 1117 VLAMTDKRSILF 1128


>gi|6005701 ATP-binding cassette, sub-family A member 8 [Homo sapiens]
          Length = 1581

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 14/90 (15%)

Query: 78   SFMNNFMTFPTGYIFDRFKTTVARLIAIFFYTTATLIIAFTSAGSAVLLF---------L 128
            SF   FMT+   +IF + +   + + +  FY    ++  F+ AG A  +F          
Sbjct: 1073 SFSLIFMTYVISFIFRKGRKN-SGIWSFCFY----VVTVFSVAGFAFSIFESDIPFIFTF 1127

Query: 129  AMPMLTIGGILFLITNLQIGNLFGQHRSTI 158
             +P  T+ G LFL ++L   +LF + R  +
Sbjct: 1128 LIPPATMIGCLFLSSHLLFSSLFSEERMDV 1157


>gi|62244004 modulator of estrogen induced transcription isoform b
           [Homo sapiens]
          Length = 1016

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 228 GNGTTKEEKETAEHENRELQSKEFLSAKE 256
           GN   K+ +E  E+E   + SKE LSA+E
Sbjct: 119 GNDELKDSEEFGENEEENVHSKELLSAEE 147


>gi|63176611 modulator of estrogen induced transcription isoform a
           [Homo sapiens]
          Length = 1034

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 228 GNGTTKEEKETAEHENRELQSKEFLSAKE 256
           GN   K+ +E  E+E   + SKE LSA+E
Sbjct: 119 GNDELKDSEEFGENEEENVHSKELLSAEE 147


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.327    0.140    0.435 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,673,115
Number of Sequences: 37866
Number of extensions: 745964
Number of successful extensions: 2721
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2704
Number of HSP's gapped (non-prelim): 24
length of query: 491
length of database: 18,247,518
effective HSP length: 106
effective length of query: 385
effective length of database: 14,233,722
effective search space: 5479982970
effective search space used: 5479982970
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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