Search of human proteins with 109148544

Search of human proteins with 109148544

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|109148544 alkB, alkylation repair homolog 6 isoform 2 [Homo
sapiens]
         (266 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|109148544 alkB, alkylation repair homolog 6 isoform 2 [Homo s...   547   e-156
gi|38570140 alkB, alkylation repair homolog 6 isoform 1 [Homo sa...   299   2e-81
gi|195927056 alkB, alkylation repair homolog 8 [Homo sapiens]          61   9e-10
gi|47519490 reticulon 4 isoform D [Homo sapiens]                       32   0.44 
gi|24431935 reticulon 4 isoform A [Homo sapiens]                       32   0.58 
gi|8923019 alkB, alkylation repair homolog 4 [Homo sapiens]            32   0.75 
gi|24431933 reticulon 4 isoform B [Homo sapiens]                       31   0.98 
gi|24497589 aristaless related homeobox [Homo sapiens]                 31   0.98 
gi|195976821 dysferlin isoform 2 [Homo sapiens]                        31   1.3  
gi|4503431 dysferlin isoform 8 [Homo sapiens]                          31   1.3  
gi|195976779 dysferlin isoform 1 [Homo sapiens]                        31   1.3  
gi|195976777 dysferlin isoform 3 [Homo sapiens]                        31   1.3  
gi|195976775 dysferlin isoform 4 [Homo sapiens]                        31   1.3  
gi|195976773 dysferlin isoform 5 [Homo sapiens]                        31   1.3  
gi|195976769 dysferlin isoform 6 [Homo sapiens]                        31   1.3  
gi|195976766 dysferlin isoform 7 [Homo sapiens]                        31   1.3  
gi|195976764 dysferlin isoform 14 [Homo sapiens]                       31   1.3  
gi|195976762 dysferlin isoform 13 [Homo sapiens]                       31   1.3  
gi|195976760 dysferlin isoform 12 [Homo sapiens]                       31   1.3  
gi|195976758 dysferlin isoform 11 [Homo sapiens]                       31   1.3  
gi|195976756 dysferlin isoform 10 [Homo sapiens]                       31   1.3  
gi|195976754 dysferlin isoform 9 [Homo sapiens]                        31   1.3  
gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo ...    31   1.3  
gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo ...    31   1.3  
gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo ...    31   1.3  
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap...    31   1.3  
gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo sa...    31   1.3  
gi|16507243 GSK-3 binding protein FRAT2 [Homo sapiens]                 31   1.3  
gi|153281158 dual specificity phosphatase 8 [Homo sapiens]             30   1.7  
gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1...    30   1.7  

>gi|109148544 alkB, alkylation repair homolog 6 isoform 2 [Homo
           sapiens]
          Length = 266

 Score =  547 bits (1409), Expect = e-156
 Identities = 266/266 (100%), Positives = 266/266 (100%)

Query: 1   MAGRGMGMLNLEIGGDAGGRIGCKELVLMEEQDARVPALEPFRVEQAPPVIYYVPDFISK 60
           MAGRGMGMLNLEIGGDAGGRIGCKELVLMEEQDARVPALEPFRVEQAPPVIYYVPDFISK
Sbjct: 1   MAGRGMGMLNLEIGGDAGGRIGCKELVLMEEQDARVPALEPFRVEQAPPVIYYVPDFISK 60

Query: 61  EEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLF 120
           EEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLF
Sbjct: 61  EEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLF 120

Query: 121 GGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSHTVLDFYEPRRPEDDDPTEQP 180
           GGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSHTVLDFYEPRRPEDDDPTEQP
Sbjct: 121 GGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSHTVLDFYEPRRPEDDDPTEQP 180

Query: 181 RPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSPPNAAACPSARPGAC 240
           RPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSPPNAAACPSARPGAC
Sbjct: 181 RPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSPPNAAACPSARPGAC 240

Query: 241 LVRGTRVSLTIRRVPRVLRAGLLLGK 266
           LVRGTRVSLTIRRVPRVLRAGLLLGK
Sbjct: 241 LVRGTRVSLTIRRVPRVLRAGLLLGK 266


>gi|38570140 alkB, alkylation repair homolog 6 isoform 1 [Homo
           sapiens]
          Length = 161

 Score =  299 bits (765), Expect = 2e-81
 Identities = 142/145 (97%), Positives = 143/145 (98%)

Query: 1   MAGRGMGMLNLEIGGDAGGRIGCKELVLMEEQDARVPALEPFRVEQAPPVIYYVPDFISK 60
           MAGRGMGMLNLEIGGDAGGRIGCKELVLMEEQDARVPALEPFRVEQAPPVIYYVPDFISK
Sbjct: 1   MAGRGMGMLNLEIGGDAGGRIGCKELVLMEEQDARVPALEPFRVEQAPPVIYYVPDFISK 60

Query: 61  EEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLF 120
           EEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLF
Sbjct: 61  EEEEYLLRQVFNAPKPKWTQLSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLF 120

Query: 121 GGLPANHVLVNQYLPGEGIMPHEDG 145
           GGLPANHVLVNQYLPGEGIM H+ G
Sbjct: 121 GGLPANHVLVNQYLPGEGIMHHQPG 145


>gi|195927056 alkB, alkylation repair homolog 8 [Homo sapiens]
          Length = 664

 Score = 61.2 bits (147), Expect = 9e-10
 Identities = 62/230 (26%), Positives = 94/230 (40%), Gaps = 40/230 (17%)

Query: 43  RVEQAPPVIYYVPDFISKEEEEYLLRQVFNAPKPKWTQ----------LSGRKLQNWGGL 92
           R +  PP +  V + IS EEE+ LL  V       WT+          L  R+++++G  
Sbjct: 129 RPQALPPGLMVVEEIISSEEEKMLLESV------DWTEDTDNQNSQKSLKHRRVKHFGYE 182

Query: 93  PHPRGMVPER-------LPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLPGEGIMPHEDG 145
            H      ++       LP   + +++K          P + + +NQY PG+GI  H D 
Sbjct: 183 FHYENNNVDKDKPLSGGLPDICESFLEKWLRKGYIKHKP-DQMTINQYEPGQGIPAHIDT 241

Query: 146 -PLYYPTVSTISLGSHTVLDFYEPRRPEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPA 204
              +   + ++SLGS  V+DF  P      D    P   PR         RSLLV+ G +
Sbjct: 242 HSAFEDEIVSLSLGSEIVMDFKHP------DGIAVPVMLPR---------RSLLVMTGES 286

Query: 205 YTRLLHGIAAARVDALDAASSPPNAAACPSARPGACLVRGTRVSLTIRRV 254
                HGI   + D + A+ S  +              RG R S T R+V
Sbjct: 287 RYLWTHGITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKV 336


>gi|47519490 reticulon 4 isoform D [Homo sapiens]
          Length = 392

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 22/116 (18%)

Query: 150 PTVSTISLGSHTVLDFYEPRR-PEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRL 208
           P  ST+   S        P + PEDD+P  +P PPP  + S   EP    V   PA    
Sbjct: 112 PVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP----VWTPPA---- 163

Query: 209 LHGIAAARVDALDAASSPPNAAACPSARPGACLVRGTRVSLTIRRVPRVLRAGLLL 264
                        A ++PP+  A P  R  +  V  T  +L     P V+R+  ++
Sbjct: 164 ------------PAPAAPPSTPAAPKRRGSSGSVDETLFALPAASEP-VIRSSAVV 206


>gi|24431935 reticulon 4 isoform A [Homo sapiens]
          Length = 1192

 Score = 32.0 bits (71), Expect = 0.58
 Identities = 30/107 (28%), Positives = 40/107 (37%), Gaps = 21/107 (19%)

Query: 150 PTVSTISLGSHTVLDFYEPRR-PEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRL 208
           P  ST+   S        P + PEDD+P  +P PPP  + S   EP    V   PA    
Sbjct: 112 PVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP----VWTPPA---- 163

Query: 209 LHGIAAARVDALDAASSPPNAAACPSARPGACLVRGTRVSLTIRRVP 255
                        A ++PP+  A P  R  +  V  T  +L     P
Sbjct: 164 ------------PAPAAPPSTPAAPKRRGSSGSVDETLFALPAASEP 198


>gi|8923019 alkB, alkylation repair homolog 4 [Homo sapiens]
          Length = 302

 Score = 31.6 bits (70), Expect = 0.75
 Identities = 53/200 (26%), Positives = 82/200 (41%), Gaps = 36/200 (18%)

Query: 49  PVIYYVPDFISKEEEEYLLRQVFNAPKPKW-TQLSGRKLQNWGGLPHPRGMVPER----- 102
           P +  + DF+++EEE  L+R +   P   W    SGR+ Q++G   + R    +      
Sbjct: 71  PGVMLIEDFVTREEEAELVRLMDRDP---WKLSQSGRRKQDYGPKVNFRKQKLKTEGFCG 127

Query: 103 LPPWLQRYVDKVSNLSLFGGLPANHVLVN---QYLP--GEGIMPH-EDGPLYYPTVSTIS 156
           LP + +   + V  + L+ GL     +      Y P  G  I PH +D  L+   + +++
Sbjct: 128 LPSFSR---EVVRRMGLYPGLEGFRPVEQCNLDYCPERGSAIDPHLDDAWLWGERLVSLN 184

Query: 157 LGSHTVLDFYEPRRPEDDDPTEQPRPPPR--------PTTSLL---------LEPRSLLV 199
           L S TVL       P        P   P         P+ S+L         L  RSLLV
Sbjct: 185 LLSPTVLSMCR-EAPGSLLLCSAPSAAPEALVDSVIAPSRSVLCQEVEVAIPLPARSLLV 243

Query: 200 LRGPAYTRLLHGIAAARVDA 219
           L G A  +  H I    ++A
Sbjct: 244 LTGAARHQWKHAIHRRHIEA 263


>gi|24431933 reticulon 4 isoform B [Homo sapiens]
          Length = 373

 Score = 31.2 bits (69), Expect = 0.98
 Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 21/88 (23%)

Query: 150 PTVSTISLGSHTVLDFYEPRR-PEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRL 208
           P  ST+   S        P + PEDD+P  +P PPP  + S   EP    V   PA    
Sbjct: 112 PVSSTVPAPSPLSAAAVSPSKLPEDDEPPARPPPPPPASVSPQAEP----VWTPPA---- 163

Query: 209 LHGIAAARVDALDAASSPPNAAACPSAR 236
                        A ++PP+  A P  R
Sbjct: 164 ------------PAPAAPPSTPAAPKRR 179


>gi|24497589 aristaless related homeobox [Homo sapiens]
          Length = 562

 Score = 31.2 bits (69), Expect = 0.98
 Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 10/69 (14%)

Query: 180 PRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSPPNAAA-------- 231
           P+    P  + L  P  L  L GP   RLL G AAA   A  AA++   A A        
Sbjct: 68  PKSSSAPFEAELHLPPKLRRLYGPGGGRLLQGAAAAAAAAAAAAAAAATATAGPRGEAPP 127

Query: 232 --CPSARPG 238
              P+ARPG
Sbjct: 128 PPPPTARPG 136


>gi|195976821 dysferlin isoform 2 [Homo sapiens]
          Length = 2081

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1301 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1360

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1361 ECGGQTVQSCVIRNLR 1376


>gi|4503431 dysferlin isoform 8 [Homo sapiens]
          Length = 2080

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1300 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1359

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1360 ECGGQTVQSCVIRNLR 1375


>gi|195976779 dysferlin isoform 1 [Homo sapiens]
          Length = 2119

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1318 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1377

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1378 ECGGQTVQSCVIRNLR 1393


>gi|195976777 dysferlin isoform 3 [Homo sapiens]
          Length = 2067

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1287 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1346

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1347 ECGGQTVQSCVIRNLR 1362


>gi|195976775 dysferlin isoform 4 [Homo sapiens]
          Length = 2098

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1318 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1377

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1378 ECGGQTVQSCVIRNLR 1393


>gi|195976773 dysferlin isoform 5 [Homo sapiens]
          Length = 2088

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1287 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1346

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1347 ECGGQTVQSCVIRNLR 1362


>gi|195976769 dysferlin isoform 6 [Homo sapiens]
          Length = 2102

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1301 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1360

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1361 ECGGQTVQSCVIRNLR 1376


>gi|195976766 dysferlin isoform 7 [Homo sapiens]
          Length = 2112

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1332 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1391

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1392 ECGGQTVQSCVIRNLR 1407


>gi|195976764 dysferlin isoform 14 [Homo sapiens]
          Length = 2118

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1317 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1376

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1377 ECGGQTVQSCVIRNLR 1392


>gi|195976762 dysferlin isoform 13 [Homo sapiens]
          Length = 2097

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1317 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1376

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1377 ECGGQTVQSCVIRNLR 1392


>gi|195976760 dysferlin isoform 12 [Homo sapiens]
          Length = 2111

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1331 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1390

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1391 ECGGQTVQSCVIRNLR 1406


>gi|195976758 dysferlin isoform 11 [Homo sapiens]
          Length = 2101

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1300 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1359

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1360 ECGGQTVQSCVIRNLR 1375


>gi|195976756 dysferlin isoform 10 [Homo sapiens]
          Length = 2087

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1286 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1345

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1346 ECGGQTVQSCVIRNLR 1361


>gi|195976754 dysferlin isoform 9 [Homo sapiens]
          Length = 2066

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/76 (23%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 172  EDDDPTEQPRPPPRPTTSLLLEPRSLL-VLRGPAYTRLLHGIAAARVDALDAASSPPNAA 230
            ++ + T+ P PPP+   ++ + P+++   L+  A   L  G+   +   L   SSP    
Sbjct: 1286 DESEDTDLPYPPPQREANIYMVPQNIKPALQRTAIEILAWGLRNMKSYQLANISSPSLVV 1345

Query: 231  ACPSARPGACLVRGTR 246
             C      +C++R  R
Sbjct: 1346 ECGGQTVQSCVIRNLR 1361


>gi|239753435 PREDICTED: hypothetical protein XP_002345651 [Homo
           sapiens]
          Length = 218

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 167 EPRRPEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSP 226
           +P RP   +P   P PPPRP    L  PR       P       G+A ++V    + S  
Sbjct: 38  KPPRPLPPNPPRPPLPPPRPPKPPLPPPR-------PPKPPSPLGLAQSKVTLFPSIS-- 88

Query: 227 PNAAACPSARPGACLVRGTR 246
           P++ A  +A   + L++ T+
Sbjct: 89  PSSMASLAALASSSLLKSTK 108


>gi|239747993 PREDICTED: hypothetical protein XP_002346504 [Homo
           sapiens]
          Length = 218

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 167 EPRRPEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSP 226
           +P RP   +P   P PPPRP    L  PR       P       G+A ++V    + S  
Sbjct: 38  KPPRPLPPNPPRPPLPPPRPPKPPLPPPR-------PPKPPSPLGLAQSKVTLFPSIS-- 88

Query: 227 PNAAACPSARPGACLVRGTR 246
           P++ A  +A   + L++ T+
Sbjct: 89  PSSMASLAALASSSLLKSTK 108


>gi|239741891 PREDICTED: hypothetical protein XP_002342316 [Homo
           sapiens]
          Length = 218

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 9/80 (11%)

Query: 167 EPRRPEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSP 226
           +P RP   +P   P PPPRP    L  PR       P       G+A ++V    + S  
Sbjct: 38  KPPRPLPPNPPRPPLPPPRPPKPPLPPPR-------PPKPPSPLGLAQSKVTLFPSIS-- 88

Query: 227 PNAAACPSARPGACLVRGTR 246
           P++ A  +A   + L++ T+
Sbjct: 89  PSSMASLAALASSSLLKSTK 108


>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
           sapiens]
          Length = 1747

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 169 RRPEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSPPN 228
           R+PE+D    +  PPP+        P + L LR  + T  L  +A+ R    +       
Sbjct: 682 RKPEEDGARRRAPPPPKRA------PSTTLTLRSKSMTAELEELASIRRRKGEKLDEMLA 735

Query: 229 AAACPSARP 237
           AAA P+ RP
Sbjct: 736 AAAEPTLRP 744


>gi|7662046 myeloid/lymphoid or mixed-lineage leukemia 4 [Homo
           sapiens]
          Length = 2715

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 21/70 (30%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 168 PRRPEDDDPTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAAARVDALDAASSPP 227
           P  P    P   P PPP P TS     R  L+LR P +T      + A +   ++  +PP
Sbjct: 619 PPPPPAPPPPPAPSPPPAPATS----SRRPLLLRAPQFTP-----SEAHLKIYESVLTPP 669

Query: 228 NAAACPSARP 237
              A  +  P
Sbjct: 670 PLGAPEAPEP 679


>gi|16507243 GSK-3 binding protein FRAT2 [Homo sapiens]
          Length = 233

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 29/81 (35%), Positives = 36/81 (44%), Gaps = 6/81 (7%)

Query: 176 PTEQPRPPPRPTTSLLLEPRSLLVLRGPAYTRLLHGIAA--ARVDALDAASSPPNAAACP 233
           P ++ RPP  P   LLL P S   + GPA +  L        RV    A       AA P
Sbjct: 82  PADKARPPAVP---LLLPPASAETV-GPAPSGALRCALGDRGRVRGRAAPYCVAEVAAGP 137

Query: 234 SARPGACLVRGTRVSLTIRRV 254
           SA PG C     R ++T RR+
Sbjct: 138 SALPGPCRRGWLRDAVTSRRL 158


>gi|153281158 dual specificity phosphatase 8 [Homo sapiens]
          Length = 625

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 42/173 (24%), Positives = 57/173 (32%), Gaps = 43/173 (24%)

Query: 101 ERLPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLPGEGIMPHEDGPLYYPTVSTISLGSH 160
           E+L PWL + ++ +    L       H L        GI       + Y  + T+ + S 
Sbjct: 219 EKLLPWLDKSIEFIDKAKLSSCQVIVHCLA-------GISRSATIAIAY-IMKTMGMSSD 270

Query: 161 TVLDFYEPRRP---------------------------EDDDPTEQPRPPPRPTTSLLLE 193
               F + RRP                           +   P+  P PPP P     L 
Sbjct: 271 DAYRFVKDRRPSISPNFNFLGQLLEYERSLKLLAALQGDPGTPSGTPEPPPSPAAGAPL- 329

Query: 194 PRSLLVLRGPAYTRLLHGIAAARVDALDAASSPPNAAACPSARPGACLVRGTR 246
           PR    L  P       G AAAR   L A   PP   A P+    + L +G R
Sbjct: 330 PR----LPPPTSESAATGNAAAREGGLSAGGEPP---APPTPPATSALQQGLR 375


>gi|38261971 cyclic AMP-regulated phosphoprotein, 21 kD isoform 1
           [Homo sapiens]
          Length = 812

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 26/109 (23%), Positives = 46/109 (42%), Gaps = 7/109 (6%)

Query: 81  LSGRKLQNWGGLPHPRGMVPERLPPWLQRYVDKVSNLSLFGGLPANHVLVNQYLPGEGIM 140
           +SG    + G +P+P   +  ++ P    Y+  +  L    G+P   +L+N +     + 
Sbjct: 435 VSGVAAGSPGCVPYPENGIGGQVAPSSTSYI--LLPLEAATGIPPGSILLNPHTGQPFVN 492

Query: 141 PHEDGPLYYPTVSTISLGSHTVLDFYEPRRPEDDDPTEQPR---PPPRP 186
           P     +Y P  S   L S  V      ++P    P+ QP+    PP+P
Sbjct: 493 PDGTPAIYNPPTSQQPLRSAMV--GQSQQQPPQQQPSPQPQQQVQPPQP 539


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.140    0.434 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,961,098
Number of Sequences: 37866
Number of extensions: 733082
Number of successful extensions: 3471
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 3405
Number of HSP's gapped (non-prelim): 92
length of query: 266
length of database: 18,247,518
effective HSP length: 100
effective length of query: 166
effective length of database: 14,460,918
effective search space: 2400512388
effective search space used: 2400512388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.