LST1 29813

Name: LST1	Sequence: fasta or formatted (118aa)		NCBI GI: 45505165
Description: leukocyte specific transcript 1 isoform 1		Not currently referenced in the text
Other entries for this name: alt prot {51aa} leukocyte specific transcript 1 isoform 3 alt prot {75aa} leukocyte specific transcript 1 isoform 2 alt prot {39aa} leukocyte specific transcript 1 isoform 5 alt prot {63aa} leukocyte specific transcript 1 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.9 7 1 C cysteine 5.1 6 1 D aspartate 3.4 4 2 E glutamate 4.2 5 1 F phenylalanine 0.0 0 0 G glycine 5.9 7 2 H histidine 3.4 4 1 I isoleucine 2.5 3 1 K lysine 0.8 1 1 L leucine 16.1 19 4 M methionine 2.5 3 1 N asparagine 2.5 3 1 P proline 9.3 11 2 Q glutamine 4.2 5 1 R arginine 14.4 17 2 S serine 6.8 8 2 T threonine 4.2 5 1 V valine 5.1 6 2 W tryptophan 2.5 3 1 Y tyrosine 0.8 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leukocyte specific transcript 1 isoform 1 LST1 0.591 leukocyte specific transcript 1 isoform 2 LST1 0.502 leukocyte specific transcript 1 isoform 4 DRD2 0.044 dopamine receptor D2 isoform short DRD2 0.036 dopamine receptor D2 isoform long LOC100293794 0.022 PREDICTED: hypothetical protein LOC100287762 0.022 PREDICTED: hypothetical protein XP_002342380 C20orf46 0.022 hypothetical protein LOC55321 IL7R 0.018 interleukin 7 receptor precursor ZNF608 0.018 zinc finger protein 608 KCNH4 0.013 potassium voltage-gated channel, subfamily H, member ... SCNN1D 0.013 sodium channel, nonvoltage-gated 1, delta isoform 2 ... SCNN1D 0.013 sodium channel, nonvoltage-gated 1, delta isoform 1... LOC100132605 0.009 PREDICTED: hypothetical protein FAM159B 0.009 PREDICTED: hypothetical protein LOC100132916 EFNB3 0.009 ephrin-B3 precursor C17orf80 0.009 lung cancer-related protein 8 isoform b C17orf80 0.009 lung cancer-related protein 8 isoform a LRRN4 0.009 leucine rich repeat neuronal 4 FAM24A 0.009 family with sequence similarity 24, member A RELA 0.009 v-rel reticuloendotheliosis viral oncogene homolog ... RELA 0.009 v-rel reticuloendotheliosis viral oncogene homolog ... PIK3R5 0.009 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... PIK3R5 0.009 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... LOC339742 0.009 PREDICTED: hypothetical protein FAM159B 0.009 PREDICTED: hypothetical protein LOC100132916 FAM159B 0.009 PREDICTED: hypothetical protein LOC100132916 SYT8 0.009 synaptotagmin VIII LIN7B 0.004 lin-7 homolog B TTC7A 0.004 tetratricopeptide repeat domain 7A Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.