LST1 29811

Name: LST1	Sequence: fasta or formatted (75aa)		NCBI GI: 45505161
Description: leukocyte specific transcript 1 isoform 2		Not currently referenced in the text
Other entries for this name: alt prot {51aa} leukocyte specific transcript 1 isoform 3 alt prot {118aa} leukocyte specific transcript 1 isoform 1 alt prot {39aa} leukocyte specific transcript 1 isoform 5 alt prot {63aa} leukocyte specific transcript 1 isoform 4
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 5 1 C cysteine 4.0 3 1 D aspartate 2.7 2 1 E glutamate 5.3 4 1 F phenylalanine 0.0 0 0 G glycine 2.7 2 1 H histidine 4.0 3 1 I isoleucine 1.3 1 1 K lysine 0.0 0 0 L leucine 9.3 7 2 M methionine 5.3 4 2 N asparagine 2.7 2 1 P proline 14.7 11 2 Q glutamine 6.7 5 1 R arginine 16.0 12 2 S serine 6.7 5 2 T threonine 6.7 5 1 V valine 4.0 3 1 W tryptophan 1.3 1 1 Y tyrosine 0.0 0 0			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 leukocyte specific transcript 1 isoform 2 LST1 0.971 leukocyte specific transcript 1 isoform 1 LST1 0.825 leukocyte specific transcript 1 isoform 4 DRD2 0.073 dopamine receptor D2 isoform short DRD2 0.058 dopamine receptor D2 isoform long LOC100293794 0.036 PREDICTED: hypothetical protein LOC100287762 0.036 PREDICTED: hypothetical protein XP_002342380 KCNH4 0.015 potassium voltage-gated channel, subfamily H, member ... PIK3R5 0.015 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... PIK3R5 0.015 phosphoinositide-3-kinase, regulatory subunit 5 [Ho... LOC339742 0.015 PREDICTED: hypothetical protein LOC100132605 0.015 PREDICTED: hypothetical protein KRBA1 0.007 KRAB A domain containing 1 SMG5 0.007 SMG5 homolog nonsense mediated mRNA decay factor [H... ID4 0.007 inhibitor of DNA binding 4, dominant negative helix-l... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.