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Search of human proteins with 45505135
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45505135 phospholipase A2, group XIIB [Homo sapiens]
(195 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45505135 phospholipase A2, group XIIB [Homo sapiens] 419 e-118
gi|21361944 phospholipase A2, group XIIA [Homo sapiens] 173 7e-44
gi|167830411 natriuretic peptide receptor 1 [Homo sapiens] 30 1.00
gi|29788760 diacylglycerol kinase, eta isoform 1 [Homo sapiens] 30 1.7
gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens] 30 1.7
gi|40806175 diacylglycerol kinase, theta [Homo sapiens] 29 2.2
gi|21704279 jagged 2 isoform b precursor [Homo sapiens] 29 2.9
gi|21704277 jagged 2 isoform a precursor [Homo sapiens] 29 2.9
gi|95113666 resistance to inhibitors of cholinesterase 8 homolog... 29 2.9
gi|16936522 wingless-type MMTV integration site family, member 1... 28 3.8
gi|31791016 keratin associated protein 21-2 [Homo sapiens] 28 3.8
gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo s... 28 4.9
gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo s... 28 4.9
gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo sa... 28 4.9
gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo s... 28 4.9
gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo sap... 28 4.9
gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo sa... 28 4.9
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 28 6.5
gi|4504151 granulin precursor [Homo sapiens] 27 8.4
gi|17978491 CD97 antigen isoform 1 precursor [Homo sapiens] 27 8.4
gi|23397681 egf-like module containing, mucin-like, hormone rece... 27 8.4
gi|23397689 egf-like module containing, mucin-like, hormone rece... 27 8.4
>gi|45505135 phospholipase A2, group XIIB [Homo sapiens]
Length = 195
Score = 419 bits (1077), Expect = e-118
Identities = 195/195 (100%), Positives = 195/195 (100%)
Query: 1 MKLASGFLVLWLSLGGGLAQSDTSPDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGK 60
MKLASGFLVLWLSLGGGLAQSDTSPDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGK
Sbjct: 1 MKLASGFLVLWLSLGGGLAQSDTSPDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGK 60
Query: 61 NGVCQYRCRYGKAPMPRPGYKPQEPNGCGSYFLGLKVPESMDLGIPAMTKCCNQLDVCYD 120
NGVCQYRCRYGKAPMPRPGYKPQEPNGCGSYFLGLKVPESMDLGIPAMTKCCNQLDVCYD
Sbjct: 61 NGVCQYRCRYGKAPMPRPGYKPQEPNGCGSYFLGLKVPESMDLGIPAMTKCCNQLDVCYD 120
Query: 121 TCGANKYRCDAKFRWCLHSICSDLKRSLGFVSKVEAACDSLVDTVFNTVWTLGCRPFMNS 180
TCGANKYRCDAKFRWCLHSICSDLKRSLGFVSKVEAACDSLVDTVFNTVWTLGCRPFMNS
Sbjct: 121 TCGANKYRCDAKFRWCLHSICSDLKRSLGFVSKVEAACDSLVDTVFNTVWTLGCRPFMNS 180
Query: 181 QRAACICAEEEKEEL 195
QRAACICAEEEKEEL
Sbjct: 181 QRAACICAEEEKEEL 195
>gi|21361944 phospholipase A2, group XIIA [Homo sapiens]
Length = 189
Score = 173 bits (439), Expect = 7e-44
Identities = 77/166 (46%), Positives = 117/166 (70%), Gaps = 7/166 (4%)
Query: 32 SDWG--LRHLRGSFESVNSYFDSFLELLGGKNGVCQYRCRYGKAPMPRPGYKPQEPNGCG 89
+DW L+ +R +++Y ++ L+LLGG++G+CQY+C G P PR GYKP PNGCG
Sbjct: 29 TDWRATLKTIRNGVHKIDTYLNAALDLLGGEDGLCQYKCSDGSKPFPRYGYKPSPPNGCG 88
Query: 90 SYFLGLKVPESMDLGIPAMTKCCNQLDVCYDTCGANKYRCDAKFRWCLHSICSDLKRSLG 149
S G+ +++GIP++TKCCNQ D CY+TCG +K CD +F++CL IC D++++LG
Sbjct: 89 SPLFGVH----LNIGIPSLTKCCNQHDRCYETCGKSKNDCDEEFQYCLSKICRDVQKTLG 144
Query: 150 FVSKVEAACDSLVDTVFNTVWTLGCRPFMNSQRAACICAEEEKEEL 195
V+ AC++ V+ +F++V LGC+P+++SQRAAC C EEK +L
Sbjct: 145 LTQHVQ-ACETTVELLFDSVIHLGCKPYLDSQRAACRCHYEEKTDL 189
>gi|167830411 natriuretic peptide receptor 1 [Homo sapiens]
Length = 1061
Score = 30.4 bits (67), Expect = 1.00
Identities = 17/69 (24%), Positives = 31/69 (44%)
Query: 17 GLAQSDTSPDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGKNGVCQYRCRYGKAPMP 76
G + D+S D E +S W + G+F V +Y + EL+ + Y +P
Sbjct: 394 GYLKIDSSGDRETDFSLWDMDPENGAFRVVLNYNGTSQELVAVSGRKLNWPLGYPPPDIP 453
Query: 77 RPGYKPQEP 85
+ G+ ++P
Sbjct: 454 KCGFDNEDP 462
>gi|29788760 diacylglycerol kinase, eta isoform 1 [Homo sapiens]
Length = 1164
Score = 29.6 bits (65), Expect = 1.7
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 94 GLKVPES-MDLGIPAMTKCCNQLDVCYDTCGANKYRCDAKFRWC---LHSICSDL 144
G+ +P ++ +P KC VC TCG+ D K WC +H+ C DL
Sbjct: 243 GVAMPHQWLEGNLPVSAKCA----VCDKTCGSVLRLQDWKCLWCKTMVHTACKDL 293
>gi|29788751 diacylglycerol kinase, eta isoform 2 [Homo sapiens]
Length = 1220
Score = 29.6 bits (65), Expect = 1.7
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 8/55 (14%)
Query: 94 GLKVPES-MDLGIPAMTKCCNQLDVCYDTCGANKYRCDAKFRWC---LHSICSDL 144
G+ +P ++ +P KC VC TCG+ D K WC +H+ C DL
Sbjct: 243 GVAMPHQWLEGNLPVSAKCA----VCDKTCGSVLRLQDWKCLWCKTMVHTACKDL 293
>gi|40806175 diacylglycerol kinase, theta [Homo sapiens]
Length = 942
Score = 29.3 bits (64), Expect = 2.2
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 7/41 (17%)
Query: 105 IPAMTKCCNQLDVCYDTCGANKYRCDAKFRWC---LHSICS 142
+P+ +C +VC TCG++ + WC HS+CS
Sbjct: 191 LPSGARC----EVCRKTCGSSDVLAGVRCEWCGVQAHSLCS 227
>gi|21704279 jagged 2 isoform b precursor [Homo sapiens]
Length = 1200
Score = 28.9 bits (63), Expect = 2.9
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
Query: 88 CGSYFLGLKVPESMD--LGIPAMT--KCCNQLDV--CYDTCGANKYRCDAKFRWCLHSIC 141
C S F G E++D LG P C +++D C+ G CD CL C
Sbjct: 586 CDSGFTGTYCHENIDDCLGQPCRNGGTCIDEVDAFRCFCPSGWEGELCDTNPNDCLPDPC 645
Query: 142 SDLKRSLGFVSKVEAACD 159
R V+ ACD
Sbjct: 646 HSRGRCYDLVNDFYCACD 663
>gi|21704277 jagged 2 isoform a precursor [Homo sapiens]
Length = 1238
Score = 28.9 bits (63), Expect = 2.9
Identities = 23/78 (29%), Positives = 30/78 (38%), Gaps = 6/78 (7%)
Query: 88 CGSYFLGLKVPESMD--LGIPAMT--KCCNQLDV--CYDTCGANKYRCDAKFRWCLHSIC 141
C S F G E++D LG P C +++D C+ G CD CL C
Sbjct: 624 CDSGFTGTYCHENIDDCLGQPCRNGGTCIDEVDAFRCFCPSGWEGELCDTNPNDCLPDPC 683
Query: 142 SDLKRSLGFVSKVEAACD 159
R V+ ACD
Sbjct: 684 HSRGRCYDLVNDFYCACD 701
>gi|95113666 resistance to inhibitors of cholinesterase 8 homolog B
[Homo sapiens]
Length = 520
Score = 28.9 bits (63), Expect = 2.9
Identities = 16/77 (20%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 96 KVPESMDLGIPAMTKCCNQLDVCYDTCGANKYRC-DAKFRWCLHSICSDLKRSLGFVSKV 154
++ + + L + K CN L C D N +C D + + L + +D++ L + +
Sbjct: 129 QMAQQLSLELNLAAKLCNLLRKCKDRKFINDIKCFDLRLLFLLSLLHTDIRSQLRYELQG 188
Query: 155 EAACDSLVDTVFNTVWT 171
++++ F+ WT
Sbjct: 189 LPLLTQILESAFSIKWT 205
>gi|16936522 wingless-type MMTV integration site family, member 10B
precursor [Homo sapiens]
Length = 389
Score = 28.5 bits (62), Expect = 3.8
Identities = 21/87 (24%), Positives = 35/87 (40%), Gaps = 20/87 (22%)
Query: 77 RPGYKPQEPNGCGSYFLGLKVPESMD----LGIPAMT-KCCNQLDVCYDTCGA------- 124
+P +P+ +G YF K P+ + +G P + CN+ D CG+
Sbjct: 296 QPRLRPRRLSGELVYFE--KSPDFCERDPTMGSPGTRGRACNKTSRLLDGCGSLCCGRGH 353
Query: 125 ------NKYRCDAKFRWCLHSICSDLK 145
RC +F WC + +C + K
Sbjct: 354 NVLRQTRVERCHCRFHWCCYVLCDECK 380
>gi|31791016 keratin associated protein 21-2 [Homo sapiens]
Length = 83
Score = 28.5 bits (62), Expect = 3.8
Identities = 18/64 (28%), Positives = 22/64 (34%), Gaps = 7/64 (10%)
Query: 64 CQYRCRYGKAPMPRPGYKPQEPNGCGSYFLGLKVPESMDLGIPAMTKCCNQLDVCYDTCG 123
C Y C YG GY GCG G G + CC +CY C
Sbjct: 27 CGYGCGYGSGCRYGSGY----GTGCG---YGCGYGSGCGYGCGYSSSCCGYRPLCYRRCY 79
Query: 124 ANKY 127
++ Y
Sbjct: 80 SSCY 83
>gi|223468672 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 28.1 bits (61), Expect = 4.9
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 25 PDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGKNGVCQYRCRYGKAPMPRPGYKPQE 84
P+ E S S +G L G+ N +FD L+ KNG + A P G+ +
Sbjct: 430 PEDEASLSLYGKALLHGN--CYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEF 487
Query: 85 PNGCGSYFLG 94
G S+ LG
Sbjct: 488 VLGTDSFHLG 497
>gi|223468670 carnitine palmitoyltransferase 1B isoform c [Homo
sapiens]
Length = 738
Score = 28.1 bits (61), Expect = 4.9
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 25 PDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGKNGVCQYRCRYGKAPMPRPGYKPQE 84
P+ E S S +G L G+ N +FD L+ KNG + A P G+ +
Sbjct: 396 PEDEASLSLYGKALLHGN--CYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEF 453
Query: 85 PNGCGSYFLG 94
G S+ LG
Sbjct: 454 VLGTDSFHLG 463
>gi|23238254 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 28.1 bits (61), Expect = 4.9
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 25 PDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGKNGVCQYRCRYGKAPMPRPGYKPQE 84
P+ E S S +G L G+ N +FD L+ KNG + A P G+ +
Sbjct: 430 PEDEASLSLYGKALLHGN--CYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEF 487
Query: 85 PNGCGSYFLG 94
G S+ LG
Sbjct: 488 VLGTDSFHLG 497
>gi|223468678 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 28.1 bits (61), Expect = 4.9
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 25 PDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGKNGVCQYRCRYGKAPMPRPGYKPQE 84
P+ E S S +G L G+ N +FD L+ KNG + A P G+ +
Sbjct: 430 PEDEASLSLYGKALLHGN--CYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEF 487
Query: 85 PNGCGSYFLG 94
G S+ LG
Sbjct: 488 VLGTDSFHLG 497
>gi|4758050 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 28.1 bits (61), Expect = 4.9
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 25 PDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGKNGVCQYRCRYGKAPMPRPGYKPQE 84
P+ E S S +G L G+ N +FD L+ KNG + A P G+ +
Sbjct: 430 PEDEASLSLYGKALLHGN--CYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEF 487
Query: 85 PNGCGSYFLG 94
G S+ LG
Sbjct: 488 VLGTDSFHLG 497
>gi|23238256 carnitine palmitoyltransferase 1B isoform a [Homo
sapiens]
Length = 772
Score = 28.1 bits (61), Expect = 4.9
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Query: 25 PDTEESYSDWGLRHLRGSFESVNSYFDSFLELLGGKNGVCQYRCRYGKAPMPRPGYKPQE 84
P+ E S S +G L G+ N +FD L+ KNG + A P G+ +
Sbjct: 430 PEDEASLSLYGKALLHGN--CYNRWFDKSFTLISFKNGQLGLNAEHAWADAPIIGHLWEF 487
Query: 85 PNGCGSYFLG 94
G S+ LG
Sbjct: 488 VLGTDSFHLG 497
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 27.7 bits (60), Expect = 6.5
Identities = 10/34 (29%), Positives = 20/34 (58%)
Query: 113 NQLDVCYDTCGANKYRCDAKFRWCLHSICSDLKR 146
+Q VC+++CG+ + D + WC ++ D +R
Sbjct: 410 SQCAVCHESCGSYQRLQDFRCLWCNSTVHDDCRR 443
>gi|4504151 granulin precursor [Homo sapiens]
Length = 593
Score = 27.3 bits (59), Expect = 8.4
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 8/82 (9%)
Query: 100 SMDLGIPAMTKCCN----QLDVCYDTCGANKYRCDAKFRWCLHSICSDLKRSLGFVSKVE 155
++ G+ A T+C + + C D GA+ C R L + L R LG +V+
Sbjct: 9 ALTAGLVAGTRCPDGQFCPVACCLDPGGASYSCC----RPLLDKWPTTLSRHLGGPCQVD 64
Query: 156 AACDSLVDTVFNTVWTLGCRPF 177
A C + +F T C PF
Sbjct: 65 AHCSAGHSCIFTVSGTSSCCPF 86
>gi|17978491 CD97 antigen isoform 1 precursor [Homo sapiens]
Length = 835
Score = 27.3 bits (59), Expect = 8.4
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 10/69 (14%)
Query: 61 NGVCQYRCRYGKAPMPRPGYKPQEPNGCGSYFLGLKVPESMDLGIPAMTKCCNQLDVCYD 120
N V Y+CR P PG P PN V E +D +C + VC++
Sbjct: 179 NNVGSYQCRCRPGWQPIPG-SPNGPNNT--------VCEDVDECSSGQHQC-DSSTVCFN 228
Query: 121 TCGANKYRC 129
T G+ RC
Sbjct: 229 TVGSYSCRC 237
>gi|23397681 egf-like module containing, mucin-like, hormone
receptor-like sequence 2 isoform a [Homo sapiens]
Length = 823
Score = 27.3 bits (59), Expect = 8.4
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 10/69 (14%)
Query: 61 NGVCQYRCRYGKAPMPRPGYKPQEPNGCGSYFLGLKVPESMDLGIPAMTKCCNQLDVCYD 120
N V Y+CR P PG P PN V E +D +C + VC++
Sbjct: 182 NNVGSYQCRCRPGWQPIPG-SPNGPNNT--------VCEDVDECSSGQHQC-DSSTVCFN 231
Query: 121 TCGANKYRC 129
T G+ RC
Sbjct: 232 TVGSYSCRC 240
>gi|23397689 egf-like module containing, mucin-like, hormone
receptor-like sequence 2 isoform e [Homo sapiens]
Length = 812
Score = 27.3 bits (59), Expect = 8.4
Identities = 21/69 (30%), Positives = 28/69 (40%), Gaps = 10/69 (14%)
Query: 61 NGVCQYRCRYGKAPMPRPGYKPQEPNGCGSYFLGLKVPESMDLGIPAMTKCCNQLDVCYD 120
N V Y+CR P PG P PN V E +D +C + VC++
Sbjct: 182 NNVGSYQCRCRPGWQPIPG-SPNGPNNT--------VCEDVDECSSGQHQC-DSSTVCFN 231
Query: 121 TCGANKYRC 129
T G+ RC
Sbjct: 232 TVGSYSCRC 240
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.456
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,664,668
Number of Sequences: 37866
Number of extensions: 408841
Number of successful extensions: 958
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 951
Number of HSP's gapped (non-prelim): 22
length of query: 195
length of database: 18,247,518
effective HSP length: 97
effective length of query: 98
effective length of database: 14,574,516
effective search space: 1428302568
effective search space used: 1428302568
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.