Guide to the Human Genome
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Name: CD97 Sequence: fasta or formatted (835aa) NCBI GI: 17978491
Description:

CD97 antigen isoform 1 precursor

Referenced in:

Complement
Peptide and Protein G-coupled Signals

Other entries for this name:
alt prot [742aa] CD97 antigen isoform 2 precursor
alt prot [786aa] CD97 antigen isoform 3 precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         48           2
 C cysteine            5.9         49           1
 D aspartate           4.0         33           2
 E glutamate           5.0         42           2
 F phenylalanine       4.7         39           2
 G glycine             7.8         65           2
 H histidine           2.0         17           1
 I isoleucine          4.7         39           2
 K lysine              4.1         34           2
 L leucine            10.7         89           3
 M methionine          1.4         12           1
 N asparagine          4.6         38           2
 P proline             4.9         41           3
 Q glutamine           4.0         33           2
 R arginine            4.4         37           2
 S serine              8.7         73           2
 T threonine           7.1         59           2
 V valine              6.1         51           2
 W tryptophan          2.0         17           1
 Y tyrosine            2.3         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   CD97 antigen isoform 1 precursor 
CD97                  0.805   CD97 antigen isoform 2 precursor 
CD97                  0.783   CD97 antigen isoform 3 precursor 
EMR2                  0.599   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.588   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.409   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.397   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.388   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.377   egf-like module containing, mucin-like, hormone rece...
EMR2                  0.305   egf-like module containing, mucin-like, hormone rece...
EMR1                  0.240   egf-like module containing, mucin-like, hormone rece...
EMR3                  0.166   egf-like module-containing mucin-like receptor 3 [H...
LPHN2                 0.156   latrophilin 2 precursor 
LPHN1                 0.155   latrophilin 1 isoform 1 precursor 
LPHN1                 0.155   latrophilin 1 isoform 2 precursor 
ELTD1                 0.155   EGF, latrophilin and seven transmembrane domain con...
LPHN3                 0.148   latrophilin 3 precursor 
GPR133                0.097   G protein-coupled receptor 133 
CELSR1                0.095   cadherin EGF LAG seven-pass G-type receptor 1 
CELSR2                0.082   cadherin EGF LAG seven-pass G-type receptor 2 
GPR113                0.078   G-protein coupled receptor 113 isoform 1 
GPR113                0.078   G-protein coupled receptor 113 isoform 2 
GPR113                0.078   G-protein coupled receptor 113 isoform 3 
FBN1                  0.077   fibrillin 1 precursor 
CELSR3                0.077   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
GPR64                 0.075   G protein-coupled receptor 64 isoform 3 
GPR64                 0.075   G protein-coupled receptor 64 isoform 2 
GPR64                 0.075   G protein-coupled receptor 64 isoform 1 
GPR64                 0.075   G protein-coupled receptor 64 isoform 4 
FBN3                  0.074   fibrillin 3 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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