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Search of human proteins with 45387925
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
(125 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens] 260 2e-70
gi|9966907 ARS component B precursor [Homo sapiens] 83 5e-17
gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 56 6e-09
gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo s... 56 6e-09
gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo ... 56 6e-09
gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens] 56 8e-09
gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens] 55 1e-08
gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo ... 48 2e-06
gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens] 46 8e-06
gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 42 2e-04
gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 42 2e-04
gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens] 42 2e-04
gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens] 41 2e-04
gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens] 41 2e-04
gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Ho... 40 4e-04
gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Ho... 40 4e-04
gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Ho... 40 4e-04
gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens] 38 0.002
gi|187829185 CD59 antigen preproprotein [Homo sapiens] 37 0.003
gi|187829183 CD59 antigen preproprotein [Homo sapiens] 37 0.003
gi|10835165 CD59 antigen preproprotein [Homo sapiens] 37 0.003
gi|42716299 CD59 antigen preproprotein [Homo sapiens] 37 0.003
gi|187829070 CD59 antigen preproprotein [Homo sapiens] 37 0.003
gi|42761474 CD59 antigen preproprotein [Homo sapiens] 37 0.003
gi|42716302 CD59 antigen preproprotein [Homo sapiens] 37 0.003
gi|187828910 CD59 antigen preproprotein [Homo sapiens] 37 0.003
gi|221554530 prostate and testis expressed 4 [Homo sapiens] 36 0.007
gi|30794264 glycosylphosphatidylinositol anchored high density l... 35 0.011
gi|41349437 bone morphogenetic protein receptor, type IA precurs... 33 0.073
gi|161333833 activin A receptor, type IC isoform 1 [Homo sapiens] 32 0.12
>gi|45387925 LY6/PLAUR domain containing 2 [Homo sapiens]
Length = 125
Score = 260 bits (665), Expect = 2e-70
Identities = 125/125 (100%), Positives = 125/125 (100%)
Query: 1 MRGTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIV 60
MRGTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIV
Sbjct: 1 MRGTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIV 60
Query: 61 YPFQGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVDGAPALNSLHCGALTLLPL 120
YPFQGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVDGAPALNSLHCGALTLLPL
Sbjct: 61 YPFQGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVDGAPALNSLHCGALTLLPL 120
Query: 121 LSLRL 125
LSLRL
Sbjct: 121 LSLRL 125
>gi|9966907 ARS component B precursor [Homo sapiens]
Length = 103
Score = 83.2 bits (204), Expect = 5e-17
Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 5 RLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPFQ 64
+L L+A CGE AL+CY C EP + C TI C +T C TTL + E YPF
Sbjct: 8 QLLLVAAWSMGCGE---ALKCYTCKEPMTSASCRTITRCKPEDTACMTTLVTVEAEYPFN 64
Query: 65 GDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCN 100
VT+SC+S C +D D IG + CC +LCN
Sbjct: 65 QSPVVTRSCSSSCVATDPDSIGAAHLIFCCFRDLCN 100
>gi|239754985 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 56.2 bits (134), Expect = 6e-09
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 5 RLALLALVLAA-CGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
RL L+ L+LAA C LA AL C+VC G C ++ C + C T +
Sbjct: 2 RLLLVLLLLAAVCAALAQALHCHVC---CGHEHCESLVECAPTDKYCVITRATSP----- 53
Query: 64 QGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVDGAPAL 107
G V KSC+ C S V + L VSCC CN A L
Sbjct: 54 -GGILVMKSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGL 96
>gi|239749508 PREDICTED: similar to RIKEN cDNA D730001G18 [Homo
sapiens]
Length = 190
Score = 56.2 bits (134), Expect = 6e-09
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 5 RLALLALVLAA-CGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
RL L+ L+LAA C LA AL C+VC G C ++ C + C T +
Sbjct: 2 RLLLVLLLLAAVCAALAQALHCHVC---CGHEHCESLVECAPTDKYCVITRATSP----- 53
Query: 64 QGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVDGAPAL 107
G V KSC+ C S V + L VSCC CN A L
Sbjct: 54 -GGILVMKSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGL 96
>gi|239743642 PREDICTED: hypothetical protein XP_002342921 [Homo
sapiens]
Length = 190
Score = 56.2 bits (134), Expect = 6e-09
Identities = 37/104 (35%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 5 RLALLALVLAA-CGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
RL L+ L+LAA C LA AL C+VC G C ++ C + C T +
Sbjct: 2 RLLLVLLLLAAVCAALAQALHCHVC---CGHEHCESLVECAPTDKYCVITRATSP----- 53
Query: 64 QGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVDGAPAL 107
G V KSC+ C S V + L VSCC CN A L
Sbjct: 54 -GGILVMKSCSPTCPNSTVSSDSRALSVSCCQGSQCNRSAAAGL 96
>gi|11321575 lymphocyte antigen 6 complex, locus D [Homo sapiens]
Length = 128
Score = 55.8 bits (133), Expect = 8e-09
Identities = 47/126 (37%), Positives = 58/126 (46%), Gaps = 15/126 (11%)
Query: 4 TRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
T L LLA + A G A LRC+VC T S+C C + CKTT V P
Sbjct: 3 TALLLLAALAVATGP-ALTLRCHVC---TSSSNCKHSVVCPASSRFCKTT----NTVEPL 54
Query: 64 QGDSTVTKSCASKCKPS-DVDG--IGQTLPVSCCNTELCNV---DGAPALNSLHCGALTL 117
+G + V K CA C PS + G T CC +LCN + AP +L AL+L
Sbjct: 55 RG-NLVKKDCAESCTPSYTLQGQVSSGTSSTQCCQEDLCNEKLHNAAPTRTALAHSALSL 113
Query: 118 LPLLSL 123
LSL
Sbjct: 114 GLALSL 119
>gi|5031995 prostate stem cell antigen preproprotein [Homo sapiens]
Length = 123
Score = 55.5 bits (132), Expect = 1e-08
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 7/122 (5%)
Query: 5 RLALLALVLAACG-ELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
+ LLAL++A + AL CY C DC+ + CT C T +
Sbjct: 2 KAVLLALLMAGLALQPGTALLCYSCKAQVSNEDCLQVENCTQLGEQCWTARIRAVGLL-- 59
Query: 64 QGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVDGAPALNSLHCGALTLLPLLSL 123
+ ++K C+ C D ++CC+T+LCN GA AL L LLP L L
Sbjct: 60 ---TVISKGCSLNCVDDSQDYYVGKKNITCCDTDLCNASGAHALQPA-AAILALLPALGL 115
Query: 124 RL 125
L
Sbjct: 116 LL 117
>gi|29294643 secreted Ly6/uPAR related protein 2 isoform b [Homo
sapiens]
Length = 97
Score = 48.1 bits (113), Expect = 2e-06
Identities = 34/100 (34%), Positives = 47/100 (47%), Gaps = 6/100 (6%)
Query: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
GT L LLA VL+ A A+ C+ C TG C + C + T C TT + ++
Sbjct: 4 GTGL-LLAAVLSLQLAAAEAIWCHQC---TGFGGCSHGSRCLRDSTHCVTT--ATRVLSN 57
Query: 63 FQGDSTVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVD 102
+ VTK C C G+G + ++CC T LCN D
Sbjct: 58 TEDLPLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 97
>gi|29337281 Ly-6 neurotoxin-like protein 1 isoform a [Homo sapiens]
Length = 131
Score = 45.8 bits (107), Expect = 8e-06
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 5/96 (5%)
Query: 7 ALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPFQGD 66
A++A + A A+ C+ C TG C + C + T C TT + ++ +
Sbjct: 41 AMVAYCMTTRTSAAEAIWCHQC---TGFGGCSHGSRCLRDSTHCVTT--ATRVLSNTEDL 95
Query: 67 STVTKSCASKCKPSDVDGIGQTLPVSCCNTELCNVD 102
VTK C C G+G + ++CC T LCN D
Sbjct: 96 PLVTKMCHIGCPDIPSLGLGPYVSIACCQTSLCNHD 131
>gi|29294645 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 41.6 bits (96), Expect = 2e-04
Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 4 TRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
T L L LV+ LA AL C+VC +C C C TT Y
Sbjct: 2 TPLLTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTR-----TYYT 54
Query: 64 QGDSTVTKSCASKCKPSDVDGIGQ-TLPVSCCNTELCNVDGAPALNSLHCGALTLLPLLS 122
V+KSC +C + DG + SCC +LCN G +L + L L
Sbjct: 55 PTRMKVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWG 114
Query: 123 L 123
L
Sbjct: 115 L 115
>gi|29337283 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 41.6 bits (96), Expect = 2e-04
Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 4 TRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
T L L LV+ LA AL C+VC +C C C TT Y
Sbjct: 2 TPLLTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTR-----TYYT 54
Query: 64 QGDSTVTKSCASKCKPSDVDGIGQ-TLPVSCCNTELCNVDGAPALNSLHCGALTLLPLLS 122
V+KSC +C + DG + SCC +LCN G +L + L L
Sbjct: 55 PTRMKVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWG 114
Query: 123 L 123
L
Sbjct: 115 L 115
>gi|29294641 Ly-6 neurotoxin-like protein 1 isoform c [Homo sapiens]
Length = 116
Score = 41.6 bits (96), Expect = 2e-04
Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 8/121 (6%)
Query: 4 TRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPF 63
T L L LV+ LA AL C+VC +C C C TT Y
Sbjct: 2 TPLLTLILVVLMGLPLAQALDCHVCAY--NGDNCFNPMRCPAMVAYCMTTR-----TYYT 54
Query: 64 QGDSTVTKSCASKCKPSDVDGIGQ-TLPVSCCNTELCNVDGAPALNSLHCGALTLLPLLS 122
V+KSC +C + DG + SCC +LCN G +L + L L
Sbjct: 55 PTRMKVSKSCVPRCFETVYDGYSKHASTTSCCQYDLCNGTGLATPATLALAPILLATLWG 114
Query: 123 L 123
L
Sbjct: 115 L 115
>gi|187761331 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 41.2 bits (95), Expect = 2e-04
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Query: 8 LLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPFQGDS 67
LLA +L E A +L C+ C C+ C+ + C T S I
Sbjct: 8 LLAALLGV--ERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNLVTFGH 65
Query: 68 TVTKSCASKCK-PSDVDGIGQTLPVSCCNTELCN---VDGAPALNSLHCGALTLLPLL 121
+++K+C+ C P V+ ++ +SCC + LCN DG + GA LL LL
Sbjct: 66 SLSKTCSPACPIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGLLLSLL 123
>gi|4505049 lymphocyte antigen 6 complex, locus E [Homo sapiens]
Length = 131
Score = 41.2 bits (95), Expect = 2e-04
Identities = 34/118 (28%), Positives = 51/118 (43%), Gaps = 6/118 (5%)
Query: 8 LLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPFQGDS 67
LLA +L E A +L C+ C C+ C+ + C T S I
Sbjct: 8 LLAALLGV--ERASSLMCFSCLNQKSNLYCLKPTICSDQDNYCVTVSASAGIGNLVTFGH 65
Query: 68 TVTKSCASKCK-PSDVDGIGQTLPVSCCNTELCN---VDGAPALNSLHCGALTLLPLL 121
+++K+C+ C P V+ ++ +SCC + LCN DG + GA LL LL
Sbjct: 66 SLSKTCSPACPIPEGVNVGVASMGISCCQSFLCNFSAADGGLRASVTLLGAGLLLSLL 123
>gi|208431840 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 40.4 bits (93), Expect = 4e-04
Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 1 MRGTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIV 60
M+G LALLA++L C A L C C T S C T C ++T+C + I
Sbjct: 27 MKGLGLALLAVLL--CSAPAHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASV----RIT 79
Query: 61 YPFQG--DSTVTKSCASKCKP------SDV------DGIGQTLPVSCCNTELCN 100
P D +V K CAS C SD GI + + V CC +LCN
Sbjct: 80 DPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK-VDVDCCEKDLCN 132
>gi|208431838 lymphocyte antigen 6 complex, locus H isoform a [Homo
sapiens]
Length = 140
Score = 40.4 bits (93), Expect = 4e-04
Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 1 MRGTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIV 60
M+G LALLA++L C A L C C T S C T C ++T+C + I
Sbjct: 6 MKGLGLALLAVLL--CSAPAHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASV----RIT 58
Query: 61 YPFQG--DSTVTKSCASKCKP------SDV------DGIGQTLPVSCCNTELCN 100
P D +V K CAS C SD GI + + V CC +LCN
Sbjct: 59 DPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK-VDVDCCEKDLCN 111
>gi|194440697 lymphocyte antigen 6 complex, locus H isoform b [Homo
sapiens]
Length = 161
Score = 40.4 bits (93), Expect = 4e-04
Identities = 39/114 (34%), Positives = 50/114 (43%), Gaps = 22/114 (19%)
Query: 1 MRGTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIV 60
M+G LALLA++L C A L C C T S C T C ++T+C + I
Sbjct: 27 MKGLGLALLAVLL--CSAPAHGLWCQDCTLTTNSSHC-TPKQCQPSDTVCASV----RIT 79
Query: 61 YPFQG--DSTVTKSCASKCKP------SDV------DGIGQTLPVSCCNTELCN 100
P D +V K CAS C SD GI + + V CC +LCN
Sbjct: 80 DPSSSRKDHSVNKMCASSCDFVKRHFFSDYLMGFINSGILK-VDVDCCEKDLCN 132
>gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens]
Length = 141
Score = 38.1 bits (87), Expect = 0.002
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 8 LLALVLAACG-----ELAPALRCYVCPEPTGVSDCVT---IATCTTN-ETMCKTTLYSRE 58
+L + CG A ++CY C E +DC + I CT N + MC+ + +
Sbjct: 3 VLGIAATFCGLFLLPGFALQIQCYQCEEFQLNNDCSSPEFIVNCTVNVQDMCQKEVMEQS 62
Query: 59 IVYPFQGDSTVTKSCA-------SKCKPSDVDGIGQTLPVSCCNTELCN 100
++ + +C S C P ++ + +SCCNT LCN
Sbjct: 63 AGIMYRKSCASSAACLIASAGYQSFCSPGKLNSVC----ISCCNTPLCN 107
>gi|187829185 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
G+ L L LVLA +L+CY CP PT +DC T C+++ C T
Sbjct: 6 GSVLFGLLLVLAVFCHSGHSLQCYNCPNPT--ADCKTAVNCSSDFDACLIT--------- 54
Query: 63 FQGDSTVTKSC--ASKCKPSDVDG--IGQTLPVSCCNTELCN 100
+ V C C +DV L CC +LCN
Sbjct: 55 -KAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|187829183 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
G+ L L LVLA +L+CY CP PT +DC T C+++ C T
Sbjct: 6 GSVLFGLLLVLAVFCHSGHSLQCYNCPNPT--ADCKTAVNCSSDFDACLIT--------- 54
Query: 63 FQGDSTVTKSC--ASKCKPSDVDG--IGQTLPVSCCNTELCN 100
+ V C C +DV L CC +LCN
Sbjct: 55 -KAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|10835165 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
G+ L L LVLA +L+CY CP PT +DC T C+++ C T
Sbjct: 6 GSVLFGLLLVLAVFCHSGHSLQCYNCPNPT--ADCKTAVNCSSDFDACLIT--------- 54
Query: 63 FQGDSTVTKSC--ASKCKPSDVDG--IGQTLPVSCCNTELCN 100
+ V C C +DV L CC +LCN
Sbjct: 55 -KAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|42716299 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
G+ L L LVLA +L+CY CP PT +DC T C+++ C T
Sbjct: 6 GSVLFGLLLVLAVFCHSGHSLQCYNCPNPT--ADCKTAVNCSSDFDACLIT--------- 54
Query: 63 FQGDSTVTKSC--ASKCKPSDVDG--IGQTLPVSCCNTELCN 100
+ V C C +DV L CC +LCN
Sbjct: 55 -KAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|187829070 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
G+ L L LVLA +L+CY CP PT +DC T C+++ C T
Sbjct: 6 GSVLFGLLLVLAVFCHSGHSLQCYNCPNPT--ADCKTAVNCSSDFDACLIT--------- 54
Query: 63 FQGDSTVTKSC--ASKCKPSDVDG--IGQTLPVSCCNTELCN 100
+ V C C +DV L CC +LCN
Sbjct: 55 -KAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|42761474 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
G+ L L LVLA +L+CY CP PT +DC T C+++ C T
Sbjct: 6 GSVLFGLLLVLAVFCHSGHSLQCYNCPNPT--ADCKTAVNCSSDFDACLIT--------- 54
Query: 63 FQGDSTVTKSC--ASKCKPSDVDG--IGQTLPVSCCNTELCN 100
+ V C C +DV L CC +LCN
Sbjct: 55 -KAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|42716302 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
G+ L L LVLA +L+CY CP PT +DC T C+++ C T
Sbjct: 6 GSVLFGLLLVLAVFCHSGHSLQCYNCPNPT--ADCKTAVNCSSDFDACLIT--------- 54
Query: 63 FQGDSTVTKSC--ASKCKPSDVDG--IGQTLPVSCCNTELCN 100
+ V C C +DV L CC +LCN
Sbjct: 55 -KAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|187828910 CD59 antigen preproprotein [Homo sapiens]
Length = 128
Score = 37.4 bits (85), Expect = 0.003
Identities = 31/102 (30%), Positives = 41/102 (40%), Gaps = 16/102 (15%)
Query: 3 GTRLALLALVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYP 62
G+ L L LVLA +L+CY CP PT +DC T C+++ C T
Sbjct: 6 GSVLFGLLLVLAVFCHSGHSLQCYNCPNPT--ADCKTAVNCSSDFDACLIT--------- 54
Query: 63 FQGDSTVTKSC--ASKCKPSDVDG--IGQTLPVSCCNTELCN 100
+ V C C +DV L CC +LCN
Sbjct: 55 -KAGLQVYNKCWKFEHCNFNDVTTRLRENELTYYCCKKDLCN 95
>gi|221554530 prostate and testis expressed 4 [Homo sapiens]
Length = 98
Score = 36.2 bits (82), Expect = 0.007
Identities = 24/82 (29%), Positives = 31/82 (37%), Gaps = 10/82 (12%)
Query: 23 LRCYVCPEPTGVSDCVTIATCTTNET-MCKTTLYSREIVYPFQGDSTV--TKSCASKCKP 79
L+C C G TC E +C TT Y F+GD + T C KC+
Sbjct: 23 LKCNTCIYTEGWKCMAGRGTCIAKENELCSTTAY-------FRGDKHMYSTHMCKYKCRE 75
Query: 80 SDVDGIGQTLPVSCCNTELCNV 101
+ G CC+ CNV
Sbjct: 76 EESSKRGLLRVTLCCDRNFCNV 97
>gi|30794264 glycosylphosphatidylinositol anchored high density
lipoprotein binding protein 1 [Homo sapiens]
Length = 184
Score = 35.4 bits (80), Expect = 0.011
Identities = 30/115 (26%), Positives = 42/115 (36%), Gaps = 18/115 (15%)
Query: 23 LRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPFQGDSTVTKSCASKCKPSDV 82
LRCY C C C+ +T C T + +T + C C+P
Sbjct: 63 LRCYTCKSLPRDERCNLTQNCSHGQT-CTTLIAHGNTESGLL--TTHSTWCTDSCQPITK 119
Query: 83 DGIGQTLPVSCCNTELCNVD---------------GAPALNSLHCGALTLLPLLS 122
G + ++CC + LCNV G P +S GA LL LL+
Sbjct: 120 TVEGTQVTMTCCQSSLCNVPPWQSSRVQDPTGKGAGGPRGSSETVGAALLLNLLA 174
>gi|41349437 bone morphogenetic protein receptor, type IA precursor
[Homo sapiens]
Length = 532
Score = 32.7 bits (73), Expect = 0.073
Identities = 28/105 (26%), Positives = 40/105 (38%), Gaps = 23/105 (21%)
Query: 12 VLAACGELAPALRCYV---CPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPFQGDST 68
V A + P L+CY CP+ + C+T C I QG++T
Sbjct: 48 VTLAPEDTLPFLKCYCSGHCPDDAINNTCITNGHCFAI------------IEEDDQGETT 95
Query: 69 VTKSCAS------KCKPSDVDGIGQTLPVSCCNTELCNVDGAPAL 107
+ C +CK S + +T + CC T LCN P L
Sbjct: 96 LASGCMKYEGSDFQCKDSPKAQLRRT--IECCRTNLCNQYLQPTL 138
>gi|161333833 activin A receptor, type IC isoform 1 [Homo sapiens]
Length = 493
Score = 32.0 bits (71), Expect = 0.12
Identities = 33/132 (25%), Positives = 46/132 (34%), Gaps = 35/132 (26%)
Query: 11 LVLAACGELAPALRCYVCPEPTGVSDCVTIATCTTNETMCKTTLYSREIVYPFQGDSTVT 70
L+LAA EL+P L+C VC C ++ C+T V G V
Sbjct: 14 LLLAAAAELSPGLKC-VC------------LLCDSSNFTCQTEGACWASVMLTNGKEQVI 60
Query: 71 KSCASK--------CKPSDVDGIGQTLPVSCCNTELCN---------VDGAPALNSLHCG 113
KSC S C S+ CC T+ CN AP L +
Sbjct: 61 KSCVSLPELNAQVFCHSSN-----NVTKTECCFTDFCNNITLHLPTASPNAPKLGPMELA 115
Query: 114 ALTLLPLLSLRL 125
+ +P+ L +
Sbjct: 116 IIITVPVCLLSI 127
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.135 0.428
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,083,368
Number of Sequences: 37866
Number of extensions: 214113
Number of successful extensions: 542
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 494
Number of HSP's gapped (non-prelim): 60
length of query: 125
length of database: 18,247,518
effective HSP length: 90
effective length of query: 35
effective length of database: 14,839,578
effective search space: 519385230
effective search space used: 519385230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.