Search of human proteins with 4507809

Search of human proteins with 4507809

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4507809 secretoglobin, family 1A, member 1 (uteroglobin)
[Homo sapiens]
         (91 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4507809 secretoglobin, family 1A, member 1 (uteroglobin) [Hom...   177   1e-45
gi|5729907 lipophilin A precursor [Homo sapiens]                       50   4e-07
gi|5729909 lipophilin B precursor [Homo sapiens]                       47   3e-06
gi|46240866 secretoglobin family 1D member 4 [Homo sapiens]            43   5e-05
gi|153252157 secretoglobin, family 1C, member 1 [Homo sapiens]         39   0.001
gi|147901293 secretoglobin, family 1C, member 1-like [Homo sapiens]    37   0.004
gi|194440660 topoisomerase (DNA) II binding protein 1 [Homo sapi...    28   1.6  
gi|116268109 nucleotide-binding oligomerization domains 27 [Homo...    28   2.1  
gi|157266317 ataxia telangiectasia and Rad3 related protein [Hom...    27   3.6  
gi|142976733 surface glycoprotein, Ig superfamily member [Homo s...    27   3.6  
gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens]        27   4.6  
gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens]        27   4.6  
gi|7661920 eukaryotic translation initiation factor 4A, isoform ...    27   4.6  
gi|239756746 PREDICTED: TBC1 domain family, member 27 [Homo sapi...    26   6.1  
gi|239751241 PREDICTED: TBC1 domain family, member 27 [Homo sapi...    26   6.1  
gi|239745731 PREDICTED: TBC1 domain family, member 27 [Homo sapi...    26   6.1  
gi|148664236 B-cell novel protein 1 isoform b [Homo sapiens]           26   6.1  
gi|71274166 regulator of G-protein signaling 7 binding protein [...    26   6.1  
gi|31542207 B-cell novel protein 1 isoform a [Homo sapiens]            26   6.1  
gi|16876445 secretoglobin, family 3A, member 2 [Homo sapiens]          26   7.9  
gi|145275187 tRNA methyltransferase 5 [Homo sapiens]                   26   7.9  

>gi|4507809 secretoglobin, family 1A, member 1 (uteroglobin) [Homo
          sapiens]
          Length = 91

 Score =  177 bits (450), Expect = 1e-45
 Identities = 91/91 (100%), Positives = 91/91 (100%)

Query: 1  MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQDMREAGA 60
          MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQDMREAGA
Sbjct: 1  MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQDMREAGA 60

Query: 61 QLKKLVDTLPQKPRESIIKLMEKIAQSSLCN 91
          QLKKLVDTLPQKPRESIIKLMEKIAQSSLCN
Sbjct: 61 QLKKLVDTLPQKPRESIIKLMEKIAQSSLCN 91


>gi|5729907 lipophilin A precursor [Homo sapiens]
          Length = 90

 Score = 50.1 bits (118), Expect = 4e-07
 Identities = 29/86 (33%), Positives = 46/86 (53%)

Query: 1  MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQDMREAGA 60
          M+L+V L L+TLALCC  A+A +C +    I   L+     ++  +  F    +   A  
Sbjct: 1  MRLSVCLLLLTLALCCYRANAVVCQALGSEITGFLLAGKPVFKFQLAKFKAPLEAVAAKM 60

Query: 61 QLKKLVDTLPQKPRESIIKLMEKIAQ 86
          ++KK VDT+  + R  I K + KIA+
Sbjct: 61 EVKKCVDTMAYEKRVLITKTLGKIAE 86


>gi|5729909 lipophilin B precursor [Homo sapiens]
          Length = 90

 Score = 47.0 bits (110), Expect = 3e-06
 Identities = 26/84 (30%), Positives = 43/84 (51%)

Query: 1  MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQDMREAGA 60
          MKL+V L LVTLALCC  A+AE CP+    +      +   ++ ++  F    +   A  
Sbjct: 1  MKLSVCLLLVTLALCCYQANAEFCPALVSELLDFFFISEPLFKLSLAKFDAPPEAVAAKL 60

Query: 61 QLKKLVDTLPQKPRESIIKLMEKI 84
           +K+  D +  + R  I +++ KI
Sbjct: 61 GVKRCTDQMSLQKRSLIAEVLVKI 84


>gi|46240866 secretoglobin family 1D member 4 [Homo sapiens]
          Length = 83

 Score = 43.1 bits (100), Expect = 5e-05
 Identities = 24/79 (30%), Positives = 40/79 (50%)

Query: 1  MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQDMREAGA 60
          M+L+V L +V+LALCC  A A +CP+    I   L  + ++    +   +P  +   A  
Sbjct: 1  MRLSVCLLMVSLALCCYQAHALVCPAVASEITVFLFLSDAAVNLQVAKLNPPPEALAAKL 60

Query: 61 QLKKLVDTLPQKPRESIIK 79
          ++K   D +  K R S+ K
Sbjct: 61 EVKHCTDQISFKKRLSLKK 79


>gi|153252157 secretoglobin, family 1C, member 1 [Homo sapiens]
          Length = 95

 Score = 38.9 bits (89), Expect = 0.001
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 2/86 (2%)

Query: 4  AVTLTLVTLALCCSSASAEICPSF-QRVIETLLMDTPSS-YEAAMELFSPDQDMREAGAQ 61
          A+ L  +TL   C  A+ E    F    ++TLL+ TP   YE  +  ++ ++D + A  +
Sbjct: 6  ALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAKAAMTE 65

Query: 62 LKKLVDTLPQKPRESIIKLMEKIAQS 87
          LK  +D L    +  ++KL+ ++  S
Sbjct: 66 LKSCIDGLQPMHKAELVKLLVQVLGS 91


>gi|147901293 secretoglobin, family 1C, member 1-like [Homo
          sapiens]
          Length = 95

 Score = 36.6 bits (83), Expect = 0.004
 Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 2/86 (2%)

Query: 4  AVTLTLVTLALCCSSASAEICPSF-QRVIETLLMDTPSS-YEAAMELFSPDQDMREAGAQ 61
          A+ L  +TL   C  A+ E    F    ++TLL+ TP   YE  +  ++ ++D + A  +
Sbjct: 6  ALLLVALTLFCICRMATGEDNDEFFMDFLQTLLVGTPEELYEGTLGKYNVNEDAKAAMTE 65

Query: 62 LKKLVDTLPQKPRESIIKLMEKIAQS 87
          LK   D L    +  ++KL+ ++  S
Sbjct: 66 LKSCRDGLQPMHKAELVKLLVQVLGS 91


>gi|194440660 topoisomerase (DNA) II binding protein 1 [Homo
           sapiens]
          Length = 1522

 Score = 28.1 bits (61), Expect = 1.6
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 33  TLLMDTPSSYEAAMELFSPDQDMREAGAQLKK--LVDTLPQKPRESIIKLMEKIAQSSLC 90
           +L +DTPS + +  +LF P  D+++A A L+         +KP   + +++ K  Q +L 
Sbjct: 817 SLHLDTPSKFLSKDKLFKPSFDVKDALAALETPGRPSQQKRKPSTPLSEVIVKNLQLALA 876

Query: 91  N 91
           N
Sbjct: 877 N 877


>gi|116268109 nucleotide-binding oligomerization domains 27 [Homo
            sapiens]
          Length = 1866

 Score = 27.7 bits (60), Expect = 2.1
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 10/71 (14%)

Query: 13   ALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMEL-FSPDQDMREAGAQLKKLVDTLPQ 71
            +LC S    E  PS  R+  TL  D P   E  +   F  DQ        L+ L+D LPQ
Sbjct: 1111 SLCLSECPLEP-PSLTRLCATL-KDCPGPLELQLSCEFLSDQS-------LETLLDCLPQ 1161

Query: 72   KPRESIIKLME 82
             P+ S+++L +
Sbjct: 1162 LPQLSLLQLSQ 1172


>gi|157266317 ataxia telangiectasia and Rad3 related protein [Homo
          sapiens]
          Length = 2644

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 13/42 (30%), Positives = 25/42 (59%)

Query: 43 EAAMELFSPDQDMREAGAQLKKLVDTLPQKPRESIIKLMEKI 84
          E  +EL S    +RE G+   +  +T+ QKPR+ + + +++I
Sbjct: 3  EHGLELASMIPALRELGSATPEEYNTVVQKPRQILCQFIDRI 44


>gi|142976733 surface glycoprotein, Ig superfamily member [Homo
          sapiens]
          Length = 1264

 Score = 26.9 bits (58), Expect = 3.6
 Identities = 11/22 (50%), Positives = 15/22 (68%)

Query: 6  TLTLVTLALCCSSASAEICPSF 27
          TL  VTL + CSS S+++ P F
Sbjct: 10 TLLYVTLTILCSSVSSDLAPYF 31


>gi|31317299 inhibitor of DNA binding 1 isoform a [Homo sapiens]
          Length = 155

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 11/31 (35%), Positives = 21/31 (67%)

Query: 54 DMREAGAQLKKLVDTLPQKPRESIIKLMEKI 84
          DM    ++LK+LV TLPQ  + S +++++ +
Sbjct: 68 DMNGCYSRLKELVPTLPQNRKVSKVEILQHV 98


>gi|31317297 inhibitor of DNA binding 1 isoform b [Homo sapiens]
          Length = 149

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 11/31 (35%), Positives = 21/31 (67%)

Query: 54 DMREAGAQLKKLVDTLPQKPRESIIKLMEKI 84
          DM    ++LK+LV TLPQ  + S +++++ +
Sbjct: 68 DMNGCYSRLKELVPTLPQNRKVSKVEILQHV 98


>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
           [Homo sapiens]
          Length = 411

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 12/27 (44%), Positives = 17/27 (62%)

Query: 53  QDMREAGAQLKKLVDTLPQKPRESIIK 79
           + MREA   +  +   +PQK RESI+K
Sbjct: 295 EKMREANFTVSSMHGDMPQKERESIMK 321


>gi|239756746 PREDICTED: TBC1 domain family, member 27 [Homo
           sapiens]
          Length = 339

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 9/59 (15%)

Query: 41  SYEAAMELFSPDQDM---------REAGAQLKKLVDTLPQKPRESIIKLMEKIAQSSLC 90
           S   A+ L+ P++D          R   AQL+KL+    Q   +S  K+M ++ +  LC
Sbjct: 64  SRNTAVLLYLPEEDAFWVAGSAAGRPNTAQLRKLLSHQEQVLHKSFPKIMRQLGKEGLC 122


>gi|239751241 PREDICTED: TBC1 domain family, member 27 [Homo
           sapiens]
          Length = 617

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 9/59 (15%)

Query: 41  SYEAAMELFSPDQDM---------REAGAQLKKLVDTLPQKPRESIIKLMEKIAQSSLC 90
           S   A+ L+ P++D          R   AQL+KL+    Q   +S  K+M ++ +  LC
Sbjct: 194 SRNTAVLLYLPEEDAFWVAGSAAGRPNTAQLRKLLSHQEQVLHKSFPKIMRQLGKEGLC 252


>gi|239745731 PREDICTED: TBC1 domain family, member 27 [Homo
           sapiens]
          Length = 339

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 9/59 (15%)

Query: 41  SYEAAMELFSPDQDM---------REAGAQLKKLVDTLPQKPRESIIKLMEKIAQSSLC 90
           S   A+ L+ P++D          R   AQL+KL+    Q   +S  K+M ++ +  LC
Sbjct: 64  SRNTAVLLYLPEEDAFWVAGSAAGRPNTAQLRKLLSHQEQVLHKSFPKIMRQLGKEGLC 122


>gi|148664236 B-cell novel protein 1 isoform b [Homo sapiens]
          Length = 651

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 22  EICPSFQRVIETLLMDTPSSYEAAMELFSPDQD-------MREAGAQLKKLVDTLPQKP 73
           E+ P   RV++TLL    +S EA   L +   D          +G +L++ V +  + P
Sbjct: 371 EVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRREVYSFGEMP 429


>gi|71274166 regulator of G-protein signaling 7 binding protein
           [Homo sapiens]
          Length = 257

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 14/60 (23%), Positives = 30/60 (50%)

Query: 11  TLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQDMREAGAQLKKLVDTLP 70
           T +L C    +   P+ +    + +     S++ + ++ + ++DMRE    L KL +T+P
Sbjct: 162 TKSLDCKIEESAETPALEDSSSSPVDSQQHSWQVSTDIENTERDMREMKNLLSKLRETMP 221


>gi|31542207 B-cell novel protein 1 isoform a [Homo sapiens]
          Length = 697

 Score = 26.2 bits (56), Expect = 6.1
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 7/59 (11%)

Query: 22  EICPSFQRVIETLLMDTPSSYEAAMELFSPDQD-------MREAGAQLKKLVDTLPQKP 73
           E+ P   RV++TLL    +S EA   L +   D          +G +L++ V +  + P
Sbjct: 371 EVDPQLPRVVQTLLRTVEASLEAVRTLLAQGMDRLSHRLRQSPSGTRLRREVYSFGEMP 429


>gi|16876445 secretoglobin, family 3A, member 2 [Homo sapiens]
          Length = 93

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 22/93 (23%), Positives = 40/93 (43%), Gaps = 11/93 (11%)

Query: 1  MKLAVTLTLVTLALCCSSASAEICPSFQRVIETLLMDTPSSYEAAMELFSPDQ------- 53
          MKL     LVT++LC  SA+A +       ++ L    P   +  +    P +       
Sbjct: 1  MKLVTIFLLVTISLCSYSATAFLINKVPLPVDKL---APLPLDNILPFMDPLKLLLKTLG 57

Query: 54 -DMREAGAQLKKLVDTLPQKPRESIIKLMEKIA 85
            +      L+K V+ L  +  E++ KL+E ++
Sbjct: 58 ISVEHLVEGLRKCVNELGPEASEAVKKLLEALS 90


>gi|145275187 tRNA methyltransferase 5 [Homo sapiens]
          Length = 509

 Score = 25.8 bits (55), Expect = 7.9
 Identities = 19/59 (32%), Positives = 29/59 (49%), Gaps = 5/59 (8%)

Query: 36  MDTPSSYEAAMELFSPDQDMREA----GAQLKKLVDTLPQKPRESII-KLMEKIAQSSL 89
           M    ++E   ELFSP  D+R          KK V+    K R+ I+ KLM  + +++L
Sbjct: 60  MPETETHERETELFSPPSDVRGMTKLDRTAFKKTVNIPVLKVRKEIVSKLMRSLKRAAL 118


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.128    0.351 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,904,298
Number of Sequences: 37866
Number of extensions: 97224
Number of successful extensions: 381
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 367
Number of HSP's gapped (non-prelim): 21
length of query: 91
length of database: 18,247,518
effective HSP length: 62
effective length of query: 29
effective length of database: 15,899,826
effective search space: 461094954
effective search space used: 461094954
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.