Search of human proteins with 4507435

Search of human proteins with 4507435

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4507435 telethonin [Homo sapiens]
         (167 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4507435 telethonin [Homo sapiens]                                  341   2e-94
gi|32261318 unc-5 homolog B [Homo sapiens]                             35   0.030
gi|28830308 sulfotransferase family, cytosolic, 1C, member 2 [Ho...    32   0.33 
gi|134304844 hepatic nuclear factor-1-alpha [Homo sapiens]             31   0.56 
gi|65301141 PH domain and leucine rich repeat protein phosphatas...    29   2.1  
gi|239752925 PREDICTED: hypothetical protein [Homo sapiens]            29   2.1  
gi|239747494 PREDICTED: hypothetical protein XP_002347536 [Homo ...    29   2.1  
gi|239741368 PREDICTED: hypothetical protein XP_002342205 [Homo ...    29   2.1  
gi|34915994 transducin-like enhancer protein 4 [Homo sapiens]          29   2.1  
gi|41349437 bone morphogenetic protein receptor, type IA precurs...    28   2.8  
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ...    28   2.8  
gi|61175251 hypothetical protein LOC388910 [Homo sapiens]              28   2.8  
gi|118498345 AT-binding transcription factor 1 [Homo sapiens]          28   3.7  
gi|31377566 ring finger protein 168 [Homo sapiens]                     28   4.8  
gi|124487405 FSHD region gene 2 family, member B [Homo sapiens]        28   4.8  
gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens]        27   6.2  
gi|223941912 coiled-coil domain containing 135 [Homo sapiens]          27   6.2  
gi|237649015 EBNA1 binding protein 2 isoform 2 [Homo sapiens]          27   8.1  
gi|237649012 EBNA1 binding protein 2 isoform 1 [Homo sapiens]          27   8.1  

>gi|4507435 telethonin [Homo sapiens]
          Length = 167

 Score =  341 bits (874), Expect = 2e-94
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MATSELSCEVSEENCERREAFWAEWKDLTLSTRPEEGCSLHEEDTQRHETYHQQGQCQVL 60
           MATSELSCEVSEENCERREAFWAEWKDLTLSTRPEEGCSLHEEDTQRHETYHQQGQCQVL
Sbjct: 1   MATSELSCEVSEENCERREAFWAEWKDLTLSTRPEEGCSLHEEDTQRHETYHQQGQCQVL 60

Query: 61  VQRSPWLMMRMGILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEEREDTPIQLQELLALE 120
           VQRSPWLMMRMGILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEEREDTPIQLQELLALE
Sbjct: 61  VQRSPWLMMRMGILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEEREDTPIQLQELLALE 120

Query: 121 TALGGQCVDRQEVAEITKQLPPVVPVSKPGALRRSLSRSMSQEAQRG 167
           TALGGQCVDRQEVAEITKQLPPVVPVSKPGALRRSLSRSMSQEAQRG
Sbjct: 121 TALGGQCVDRQEVAEITKQLPPVVPVSKPGALRRSLSRSMSQEAQRG 167


>gi|32261318 unc-5 homolog B [Homo sapiens]
          Length = 945

 Score = 35.0 bits (79), Expect = 0.030
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 10/107 (9%)

Query: 30  LSTRPEEGCSLHEED--TQRHETYHQQGQCQVLVQRSPWLMMRMGILGRGLQEYQLPYQR 87
           L T+  +G   H E+  T   ET +    CQ+  +    L+ ++G      + Y     +
Sbjct: 637 LKTQAHQG---HWEEVVTLDEETLNTPCYCQLEPRACHILLDQLGTYVFTGESYSRSAVK 693

Query: 88  VLPLPIFTPAKMGATKEER-----EDTPIQLQELLALETALGGQCVD 129
            L L +F PA   + +        EDTP+ L+E+L LE  LGG  V+
Sbjct: 694 RLQLAVFAPALCTSLEYSLRVYCLEDTPVALKEVLELERTLGGYLVE 740


>gi|28830308 sulfotransferase family, cytosolic, 1C, member 2 [Homo
           sapiens]
          Length = 302

 Score = 31.6 bits (70), Expect = 0.33
 Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 6/83 (7%)

Query: 13  ENCERREAFW---AEWKDLTLSTRPEEGCSLHEEDTQ--RHETYHQQGQCQVLVQRSPWL 67
           + C+  +  W   A+  DL +ST P+ G +  +E  +  ++E   ++ +     QR P+L
Sbjct: 30  DTCDIWDKIWNFQAKPDDLLISTYPKAGTTWTQEIVELIQNEGDVEKSKRAPTHQRFPFL 89

Query: 68  MMRMGILGRGL-QEYQLPYQRVL 89
            M++  LG GL Q + +P  R+L
Sbjct: 90  EMKIPSLGSGLEQAHAMPSPRIL 112


>gi|134304844 hepatic nuclear factor-1-alpha [Homo sapiens]
          Length = 631

 Score = 30.8 bits (68), Expect = 0.56
 Identities = 19/79 (24%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 43  EDTQRHETYHQQGQCQVLVQRSPWLMMRMGILGRGLQEYQLPYQRVLPLPIFTPAKMGAT 102
           E+    E  HQ+   + L+Q  PW + +M  +   LQ++ +P + V+       + +  +
Sbjct: 90  ENLSPEEAAHQKAVVETLLQEDPWRVAKM--VKSYLQQHNIPQREVVDTTGLNQSHL--S 145

Query: 103 KEEREDTPIQLQELLALET 121
           +   + TP++ Q+  AL T
Sbjct: 146 QHLNKGTPMKTQKRAALYT 164


>gi|65301141 PH domain and leucine rich repeat protein
            phosphatase-like [Homo sapiens]
          Length = 1323

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 3/45 (6%)

Query: 1    MATSELSCEVSEENCERREAFWAEWKDLTLSTRPEEGCSLHEEDT 45
            M+TSE+S EV     +   A      D  L  RPE  CSLH   T
Sbjct: 1084 MSTSEVSSEVGSTASDEHNAGGL---DTALLPRPERRCSLHPTPT 1125


>gi|239752925 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 164

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 72  GILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEERED----TPIQLQE----LLALETAL 123
           G++GRG+Q  Q+P      +P     +  A K  RE+     P+ + E    +L +E AL
Sbjct: 79  GVVGRGVQLQQVPMCHSYQIPHHAKEEPCACKGRREEQKLVAPLHVNEGCPQVLEVEEAL 138

Query: 124 GGQCVDRQEVAEI-TKQLPPVVP 145
            G  +     A I  +  PP  P
Sbjct: 139 VGNVLHSHVAATIFCQDSPPSYP 161


>gi|239747494 PREDICTED: hypothetical protein XP_002347536 [Homo
           sapiens]
          Length = 164

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 72  GILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEERED----TPIQLQE----LLALETAL 123
           G++GRG+Q  Q+P      +P     +  A K  RE+     P+ + E    +L +E AL
Sbjct: 79  GVVGRGVQLQQVPMCHSYQIPHHAKEEPCACKGRREEQKLVAPLHVNEGCPQVLEVEEAL 138

Query: 124 GGQCVDRQEVAEI-TKQLPPVVP 145
            G  +     A I  +  PP  P
Sbjct: 139 VGNVLHSHVAATIFCQDSPPSYP 161


>gi|239741368 PREDICTED: hypothetical protein XP_002342205 [Homo
           sapiens]
          Length = 164

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 24/83 (28%), Positives = 37/83 (44%), Gaps = 9/83 (10%)

Query: 72  GILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEERED----TPIQLQE----LLALETAL 123
           G++GRG+Q  Q+P      +P     +  A K  RE+     P+ + E    +L +E AL
Sbjct: 79  GVVGRGVQLQQVPMCHSYQIPHHAKEEPCACKGRREEQKLVAPLHVNEGCPQVLEVEEAL 138

Query: 124 GGQCVDRQEVAEI-TKQLPPVVP 145
            G  +     A I  +  PP  P
Sbjct: 139 VGNVLHSHVAATIFCQDSPPSYP 161


>gi|34915994 transducin-like enhancer protein 4 [Homo sapiens]
          Length = 773

 Score = 28.9 bits (63), Expect = 2.1
 Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 5/77 (6%)

Query: 52  HQQGQCQVLVQRSPWLMMRMG-ILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEEREDTP 110
           HQQ   Q + +     M  +  I+G+ LQ   L +   LP+P+ TP   G   +     P
Sbjct: 106 HQQQVVQAVERAKQVTMAELNAIIGQQLQAQHLSHGHGLPVPL-TPHPSGL--QPPAIPP 162

Query: 111 IQLQE-LLALETALGGQ 126
           I     LLAL +ALGGQ
Sbjct: 163 IGSSAGLLALSSALGGQ 179


>gi|41349437 bone morphogenetic protein receptor, type IA precursor
           [Homo sapiens]
          Length = 532

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)

Query: 66  WLMMRMGILGRGLQEYQLPYQRVLP 90
           W M R  I G  ++EYQLPY  ++P
Sbjct: 438 WEMARRCITGGIVEEYQLPYYNMVP 462


>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
           [Homo sapiens]
          Length = 593

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)

Query: 119 LETALGGQCVDRQEVAEITKQLPPVVPVSKPGALRRSLSRSMSQEAQR 166
           +ET L  Q   RQE+ E  +QLPP  P + PG  R +       E+ R
Sbjct: 7   METLLQRQQRARQEL-EARQQLPPDPPAAPPGRARAAPDEDREPESAR 53


>gi|61175251 hypothetical protein LOC388910 [Homo sapiens]
          Length = 113

 Score = 28.5 bits (62), Expect = 2.8
 Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 7/76 (9%)

Query: 95  TPAKMGA----TKEEREDTPIQLQELL--ALETALGGQCVDRQEVAEITKQLPPVVPVSK 148
           TP  MG     T EE E   ++L + L   L T+ G  C  +  +   TK++ P +P   
Sbjct: 36  TPCMMGCPTHFTDEEMEAREMKLADFLWNFLWTSGGTSC-QQSRLDCFTKRMQPHLPAGV 94

Query: 149 PGALRRSLSRSMSQEA 164
             ALRR     M   A
Sbjct: 95  SSALRREAQNQMKTPA 110


>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
          Length = 3703

 Score = 28.1 bits (61), Expect = 3.7
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 13/79 (16%)

Query: 39   SLHEEDTQRHETYHQQGQCQVLVQRSPWLMMRMGILGRGLQEYQLPYQRVLPLPIFTPAK 98
            SL E   Q+ +   QQ Q Q + Q+ P             +  Q P     P P   PAK
Sbjct: 3370 SLQEAIQQQQQRQLQQQQQQKVQQQQP-------------KASQTPVPPGAPSPDKDPAK 3416

Query: 99   MGATKEEREDTPIQLQELL 117
                 EE+++TP ++  LL
Sbjct: 3417 ESPKPEEQKNTPREVSPLL 3435


>gi|31377566 ring finger protein 168 [Homo sapiens]
          Length = 571

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 131 QEVAEITKQLPPVVPVSKPGALRRSLSRSMSQEA 164
           QE  E+     PV  +SKPG LRR     +S+ A
Sbjct: 95  QESEEVADDYQPVRLLSKPGELRREYEEEISKVA 128


>gi|124487405 FSHD region gene 2 family, member B [Homo sapiens]
          Length = 278

 Score = 27.7 bits (60), Expect = 4.8
 Identities = 36/177 (20%), Positives = 64/177 (36%), Gaps = 22/177 (12%)

Query: 2   ATSELSCEVSEENCERREAFWAEWKDLTLSTRPEEGCSL------------HEEDTQRHE 49
           A SE       ENC +R+    +    T    PE+ CSL            H  + Q   
Sbjct: 82  AGSEPESSSYRENCRKRKMSSKDSCQDTAGNCPEKECSLSLNKKSRSSTPVHNSEIQETC 141

Query: 50  TYHQQGQCQVLVQRSPWLMMR-MGILGRGLQEYQLPYQRVLPLPIFTPAKMGATKEERED 108
             H +G+ +    RS     R +G+    +++  +   R +   ++    +     ++  
Sbjct: 142 DAHHRGRSRACTGRSKRHRSRALGVQTPSIRKSLVTSVRAMSEAVY--QDLAQVWAQQIH 199

Query: 109 TPIQLQELLALETALGGQCVDRQEVAEITKQLPPV-------VPVSKPGALRRSLSR 158
           +P+  ++L  L    G  C   Q +  +  Q   V       VP + PG    +L R
Sbjct: 200 SPLTCEQLTLLTRLRGPLCAQVQTLYSMATQAAYVFPAESWLVPATLPGPGESALDR 256


>gi|21327710 nucleosome assembly protein 1-like 3 [Homo sapiens]
          Length = 506

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)

Query: 96  PAKMGATKEEREDTPIQLQELLALETALGGQCVD-RQEVAEITKQLPPV 143
           P ++   K+E ++ P ++ E+ A E A    C++   EV E  K++P V
Sbjct: 210 PKEIPEVKDEEKEVPKEIPEVKAEEKADSKDCMEATPEVKEDPKEVPQV 258


>gi|223941912 coiled-coil domain containing 135 [Homo sapiens]
          Length = 874

 Score = 27.3 bits (59), Expect = 6.2
 Identities = 18/40 (45%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 12 EENCERREAF-WAEWKDLTLSTRPEEGCSLHEEDTQRHET 50
          EE  ER EA  WAEW  +    RP E     EE T + ET
Sbjct: 11 EEEAEREEAAEWAEWARMEKMMRPVE--VRKEEITLKQET 48


>gi|237649015 EBNA1 binding protein 2 isoform 2 [Homo sapiens]
          Length = 306

 Score = 26.9 bits (58), Expect = 8.1
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 13/57 (22%)

Query: 17  RREAFWAEWKDLTLSTRPEEGCSL-------------HEEDTQRHETYHQQGQCQVL 60
           +R+  W E  D+TL   PE G S               E+D QR  ++++Q Q  VL
Sbjct: 61  KRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVL 117


>gi|237649012 EBNA1 binding protein 2 isoform 1 [Homo sapiens]
          Length = 361

 Score = 26.9 bits (58), Expect = 8.1
 Identities = 18/57 (31%), Positives = 26/57 (45%), Gaps = 13/57 (22%)

Query: 17  RREAFWAEWKDLTLSTRPEEGCSL-------------HEEDTQRHETYHQQGQCQVL 60
           +R+  W E  D+TL   PE G S               E+D QR  ++++Q Q  VL
Sbjct: 116 KRDLEWVERLDVTLGPVPEIGGSEAPAPQNKDQKAVDPEDDFQREMSFYRQAQAAVL 172


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.130    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,832,553
Number of Sequences: 37866
Number of extensions: 301130
Number of successful extensions: 852
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 847
Number of HSP's gapped (non-prelim): 20
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.