Search of human proteins with 4507115

Search of human proteins with 4507115

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4507115 fascin 1 [Homo sapiens]
         (493 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4507115 fascin 1 [Homo sapiens]                                   1004   0.0  
gi|6912626 fascin 2 isoform 1 [Homo sapiens]                          566   e-161
gi|116295251 fascin 2 isoform 2 [Homo sapiens]                        554   e-158
gi|9966791 fascin 3 [Homo sapiens]                                    181   1e-45
gi|193788730 calcium channel, voltage-dependent, L type, alpha 1...    32   1.0  
gi|193788720 calcium channel, voltage-dependent, L type, alpha 1...    32   1.0  
gi|4758404 FSHD region gene 1 [Homo sapiens]                           32   1.3  
gi|54292123 lysosomal trafficking regulator [Homo sapiens]             30   3.8  
gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens]          30   3.8  
gi|223029500 EF-hand calcium binding domain 5 isoform b [Homo sa...    30   5.0  
gi|90652855 EF-hand calcium binding domain 5 isoform a [Homo sap...    30   5.0  
gi|45643129 guanine nucleotide binding protein-like 3 isoform 2 ...    30   6.6  
gi|45643127 guanine nucleotide binding protein-like 3 isoform 2 ...    30   6.6  
gi|45593130 guanine nucleotide binding protein-like 3 isoform 1 ...    30   6.6  
gi|117606360 ADP-ribosylation factor guanine nucleotide factor 6...    30   6.6  

>gi|4507115 fascin 1 [Homo sapiens]
          Length = 493

 Score = 1004 bits (2595), Expect = 0.0
 Identities = 493/493 (100%), Positives = 493/493 (100%)

Query: 1   MTANGTAEAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAV 60
           MTANGTAEAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAV
Sbjct: 1   MTANGTAEAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAV 60

Query: 61  CLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLS 120
           CLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLS
Sbjct: 61  CLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLS 120

Query: 121 CFAQTVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLA 180
           CFAQTVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLA
Sbjct: 121 CFAQTVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLA 180

Query: 181 FQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRSGKVAFRDCEGRYLAPSGPSGTL 240
           FQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRSGKVAFRDCEGRYLAPSGPSGTL
Sbjct: 181 FQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRSGKVAFRDCEGRYLAPSGPSGTL 240

Query: 241 KAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDR 300
           KAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDR
Sbjct: 241 KAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDR 300

Query: 301 DTKKCAFRTHTGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKN 360
           DTKKCAFRTHTGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKN
Sbjct: 301 DTKKCAFRTHTGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKN 360

Query: 361 GQLAASVETAGDSELFLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSYDVFQLEFND 420
           GQLAASVETAGDSELFLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSYDVFQLEFND
Sbjct: 361 GQLAASVETAGDSELFLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSYDVFQLEFND 420

Query: 421 GAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEFCDYNKVAIKVGGRYLKGDHAGVLKA 480
           GAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEFCDYNKVAIKVGGRYLKGDHAGVLKA
Sbjct: 421 GAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEFCDYNKVAIKVGGRYLKGDHAGVLKA 480

Query: 481 SAETVDPASLWEY 493
           SAETVDPASLWEY
Sbjct: 481 SAETVDPASLWEY 493


>gi|6912626 fascin 2 isoform 1 [Homo sapiens]
          Length = 492

 Score =  566 bits (1458), Expect = e-161
 Identities = 275/494 (55%), Positives = 361/494 (73%), Gaps = 3/494 (0%)

Query: 1   MTANGTAEAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAV 60
           M  NG  + ++IQFGL+N  ++YLTAE+FGFKVNASA SLK+KQ W LE  P + G+A +
Sbjct: 1   MPTNGLHQVLKIQFGLVNDTDRYLTAESFGFKVNASAPSLKRKQTWVLEPDPGQ-GTAVL 59

Query: 61  CLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLS 120
              SHLGRYL+A++DG V CE E PG DCRFL++   DGRW L+SE H R+FGGTED+LS
Sbjct: 60  LRSSHLGRYLSAEEDGRVACEAEQPGRDCRFLVLPQPDGRWVLRSEPHGRFFGGTEDQLS 119

Query: 121 CFAQTVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLA 180
           CFA  VSPAE W+VH+A+HPQ ++ SV+R+RY HL  R  DE+A D D PWGVD+L+TL 
Sbjct: 120 CFATAVSPAELWTVHLAIHPQAHLLSVSRRRYVHLCPRE-DEMAADGDKPWGVDALLTLI 178

Query: 181 FQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRSGKVAFRDCEGRYLAPSGPSGTL 240
           F+ +RY +++ D R+LR DGRLV  PEP   YTLEF++GK+AF+DC+G YLAP GP+GTL
Sbjct: 179 FRSRRYCLKSCDSRYLRSDGRLVWEPEPRACYTLEFKAGKLAFKDCDGHYLAPVGPAGTL 238

Query: 241 KAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDR 300
           KAG+ T+ GKDELF LE+S  QVVL AAN R VS RQG+++SANQD+E D ETF ++ID+
Sbjct: 239 KAGRNTRPGKDELFDLEESHPQVVLVAANHRYVSVRQGVNVSANQDDELDHETFLMQIDQ 298

Query: 301 DTKKCAFRTHTGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKN 360
           +TKKC F + TG YWTL   GG+ +TA+  +A+  F++EWR RR+ L+ASNG++V  KKN
Sbjct: 299 ETKKCTFYSSTGGYWTLVTHGGIHATATQVSANTMFEMEWRGRRVALKASNGRYVCMKKN 358

Query: 361 GQLAASVETAGDSELFLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSYDVFQLEFND 420
           GQLAA  +  G  E F +KLINRPI+V RG  GF+   + +  LD NRS YDVF L F+D
Sbjct: 359 GQLAAISDFVGKDEEFTLKLINRPILVLRGLDGFVCHHRGSNQLDTNRSVYDVFHLSFSD 418

Query: 421 GAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEFCDYNKVAIKV-GGRYLKGDHAGVLK 479
           GAY I+   G +W  GS  +V S G+   DF FEF +  ++AI+   G+YL+G  +G+L+
Sbjct: 419 GAYRIRGRDGGFWYTGSHGSVCSDGERAEDFVFEFRERGRLAIRARSGKYLRGGASGLLR 478

Query: 480 ASAETVDPASLWEY 493
           A A+     +LWEY
Sbjct: 479 ADADAPAGTALWEY 492


>gi|116295251 fascin 2 isoform 2 [Homo sapiens]
          Length = 516

 Score =  554 bits (1427), Expect = e-158
 Identities = 275/518 (53%), Positives = 362/518 (69%), Gaps = 27/518 (5%)

Query: 1   MTANGTAEAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAV 60
           M  NG  + ++IQFGL+N  ++YLTAE+FGFKVNASA SLK+KQ W LE  P + G+A +
Sbjct: 1   MPTNGLHQVLKIQFGLVNDTDRYLTAESFGFKVNASAPSLKRKQTWVLEPDPGQ-GTAVL 59

Query: 61  CLRSHLGRYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLS 120
              SHLGRYL+A++DG V CE E PG DCRFL++   DGRW L+SE H R+FGGTED+LS
Sbjct: 60  LRSSHLGRYLSAEEDGRVACEAEQPGRDCRFLVLPQPDGRWVLRSEPHGRFFGGTEDQLS 119

Query: 121 CFAQTVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLA 180
           CFA  VSPAE W+VH+A+HPQ ++ SV+R+RY HL  R  DE+A D D PWGVD+L+TL 
Sbjct: 120 CFATAVSPAELWTVHLAIHPQAHLLSVSRRRYVHLCPRE-DEMAADGDKPWGVDALLTLI 178

Query: 181 FQDQRYSVQTADHRFLRHDGRLVARPEPATGYTLEFRSGKVAFRDCEGRYLAPSGPSGTL 240
           F+ +RY +++ D R+LR DGRLV  PEP   YTLEF++GK+AF+DC+G YLAP GP+GTL
Sbjct: 179 FRSRRYCLKSCDSRYLRSDGRLVWEPEPRACYTLEFKAGKLAFKDCDGHYLAPVGPAGTL 238

Query: 241 KAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDR 300
           KAG+ T+ GKDELF LE+S  QVVL AAN R VS RQG+++SANQD+E D ETF ++ID+
Sbjct: 239 KAGRNTRPGKDELFDLEESHPQVVLVAANHRYVSVRQGVNVSANQDDELDHETFLMQIDQ 298

Query: 301 DTKKCAFRTHTGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKN 360
           +TKKC F + TG YWTL   GG+ +TA+  +A+  F++EWR RR+ L+ASNG++V  KKN
Sbjct: 299 ETKKCTFYSSTGGYWTLVTHGGIHATATQVSANTMFEMEWRGRRVALKASNGRYVCMKKN 358

Query: 361 GQLAA------------------------SVETAGDSELFLMKLINRPIIVFRGEHGFIG 396
           GQLAA                        ++   G  E F +KLINRPI+V RG  GF+ 
Sbjct: 359 GQLAAISDFVGPPPRPAWTGKVAGGAAQQTLSPPGKDEEFTLKLINRPILVLRGLDGFVC 418

Query: 397 CRKVTGTLDANRSSYDVFQLEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEFC 456
             + +  LD NRS YDVF L F+DGAY I+   G +W  GS  +V S G+   DF FEF 
Sbjct: 419 HHRGSNQLDTNRSVYDVFHLSFSDGAYRIRGRDGGFWYTGSHGSVCSDGERAEDFVFEFR 478

Query: 457 DYNKVAIKV-GGRYLKGDHAGVLKASAETVDPASLWEY 493
           +  ++AI+   G+YL+G  +G+L+A A+     +LWEY
Sbjct: 479 ERGRLAIRARSGKYLRGGASGLLRADADAPAGTALWEY 516


>gi|9966791 fascin 3 [Homo sapiens]
          Length = 498

 Score =  181 bits (459), Expect = 1e-45
 Identities = 133/489 (27%), Positives = 212/489 (43%), Gaps = 5/489 (1%)

Query: 8   EAVQIQFGLINCGNKYLTAEAFGFKVNASASSLKKKQIWTLEQPPDEAGSAAVCLRSHLG 67
           +A  ++ GLI+    YLT EA    V A+A SL ++Q W +    +    A V L+S  G
Sbjct: 12  KAEDLRVGLISWAGTYLTFEACKNTVTATAKSLGRRQTWEILVSNEHETQAVVRLKSVQG 71

Query: 68  RYLAADKDGNVTCEREVPGPDCRFLIVAHDDGRWSLQSEAHRRYFGGTEDRLSCFAQTVS 127
            YL  + DG V   R        FL+  H + +W+LQ     RY       + C +  +S
Sbjct: 72  LYLLCECDGTVCYGRPRTSHHGCFLLRFHRNSKWTLQCLISGRYLESNGKDVFCTSHVLS 131

Query: 128 PAEKWSVHIAMHPQVNIYSVTRKRYAHLSARPADEIAVDRDVPWGVDSLITLAFQDQRYS 187
               W+   A+H  V +YS   + YA         I VD  VP   +    L F+D  Y 
Sbjct: 132 AYHMWTPRPALHVHVILYSPIHRCYARADP-TMGRIWVDAAVPCLEECGFLLHFRDGCYH 190

Query: 188 VQTADHRFLRHDGRLVARPEPATGYTLEFR-SGKVAFRDCEGRYLAPSGPSGTLKAGKAT 246
           ++T+ H FL H  RL ++P   T + ++ R  G VA  D EG  L P G    L  G   
Sbjct: 191 LETSTHHFLSHVDRLFSQPSSQTAFHMQVRPGGLVALCDGEGGMLYPQGTHLLLGMG-CN 249

Query: 247 KVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDRDTKKCA 306
            +  +E F L+     V L++   R +S     ++ A  +       FQ E D ++    
Sbjct: 250 PMRGEEWFILQHCPTWVSLRSKTGRFISVIYDGEVRAASERLNRMSLFQFECDSESPTVQ 309

Query: 307 FRTHTGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKNGQLAAS 366
            R+  G Y +      V +      +  +F + W   RI L++  G+F+    N  L A+
Sbjct: 310 LRSANGYYLSQRRHRAVMADGHPLESDTFFRMHWNCGRIILQSCRGRFLGIAPNSLLMAN 369

Query: 367 VETAGDSELFLMKLINRPIIVFRGEHGFIGCRKVTGTLDANRSSYD-VFQLEFNDGAYNI 425
           V   G +E F +   NR  +V RG +G++G       +  N+   D +  L    G Y+ 
Sbjct: 370 VILPGPNEEFGILFANRSFLVLRGRYGYVGSSSGHDLIQCNQDQPDRIHLLPCRPGIYHF 429

Query: 426 KDSTGKYWTVGSDSAVTSSGDTPVDFFFEFCDYNKVAIKV-GGRYLKGDHAGVLKASAET 484
           +   G +W++ S       G   ++F  E    N + +    G Y++ D +G L A +E 
Sbjct: 430 QAQGGSFWSITSFGTFRPWGKFALNFCIELQGSNLLTVLAPNGFYMRADQSGTLLADSED 489

Query: 485 VDPASLWEY 493
           +    +WE+
Sbjct: 490 ITRECIWEF 498


>gi|193788730 calcium channel, voltage-dependent, L type, alpha 1C
            subunit isoform 4 [Homo sapiens]
          Length = 2173

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 12/44 (27%), Positives = 27/44 (61%)

Query: 263  VVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDRDTKKCA 306
            ++L+ AN     +R+     A Q+E +  ET++++++ DT+ C+
Sbjct: 1841 LLLRKANPSRCHSRESQAAMAGQEETSQDETYEVKMNHDTEACS 1884


>gi|193788720 calcium channel, voltage-dependent, L type, alpha 1C
            subunit isoform 1 [Homo sapiens]
          Length = 2221

 Score = 32.3 bits (72), Expect = 1.0
 Identities = 12/44 (27%), Positives = 27/44 (61%)

Query: 263  VVLQAANERNVSTRQGMDLSANQDEETDQETFQLEIDRDTKKCA 306
            ++L+ AN     +R+     A Q+E +  ET++++++ DT+ C+
Sbjct: 1889 LLLRKANPSRCHSRESQAAMAGQEETSQDETYEVKMNHDTEACS 1932


>gi|4758404 FSHD region gene 1 [Homo sapiens]
          Length = 258

 Score = 32.0 bits (71), Expect = 1.3
 Identities = 17/76 (22%), Positives = 39/76 (51%)

Query: 304 KCAFRTHTGKYWTLTATGGVQSTASSKNASCYFDIEWRDRRITLRASNGKFVTSKKNGQL 363
           + A ++  GKY  + + G V   + +      ++  +++ ++ L ASN  F+   + G +
Sbjct: 106 RIALKSGYGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGDI 165

Query: 364 AASVETAGDSELFLMK 379
            A  +TAG+ E+  ++
Sbjct: 166 EAKSKTAGEEEMIKIR 181


>gi|54292123 lysosomal trafficking regulator [Homo sapiens]
          Length = 3801

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 122  FAQTVSPAEKWSVHIAMHPQVNIYSVTRKRYAHLS--ARPADEIAVDRDVPWGVDSLITL 179
            F   VS  E      A+   +  Y  T ++  H++  +RP  ++ ++ ++P  V  L+  
Sbjct: 3384 FGMDVSAVEDPVQRRALETMIKTYGQTPRQLFHMAHVSRPGAKLNIEGELPAAVGLLVQF 3443

Query: 180  AFQDQRYSVQ 189
            AF++ R  V+
Sbjct: 3444 AFRETREQVK 3453


>gi|32129214 neuronal calcium-binding protein 2 [Homo sapiens]
          Length = 386

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 7/54 (12%)

Query: 405 DANRSSYDVFQLEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEFCDY 458
           D  + S + FQL F DG  N K+    + T+ SD+  T+  DT      E CDY
Sbjct: 76  DDGKLSLEEFQLFFADGVLNEKELEDLFHTIDSDN--TNHVDTK-----ELCDY 122


>gi|223029500 EF-hand calcium binding domain 5 isoform b [Homo
           sapiens]
          Length = 856

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 237 SGTLKAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQL 296
           SG +   K+ KV    +FAL+++  +   +   ++N+  R      A Q +  D+E  + 
Sbjct: 30  SGNIAIRKSAKV----IFALDETELKSKPEHTWKKNLFERMEARAQAMQQKIIDKENLKK 85

Query: 297 EIDRDTKKCAFRTHTGKYWTLTATGGVQSTA 327
           E+++  +K   R +  K W  T +  + +TA
Sbjct: 86  ELEKKAEKKLPRDNLAKEWFNTDSMTLNNTA 116


>gi|90652855 EF-hand calcium binding domain 5 isoform a [Homo
           sapiens]
          Length = 1503

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 22/91 (24%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 237 SGTLKAGKATKVGKDELFALEQSCAQVVLQAANERNVSTRQGMDLSANQDEETDQETFQL 296
           SG +   K+ KV    +FAL+++  +   +   ++N+  R      A Q +  D+E  + 
Sbjct: 86  SGNIAIRKSAKV----IFALDETELKSKPEHTWKKNLFERMEARAQAMQQKIIDKENLKK 141

Query: 297 EIDRDTKKCAFRTHTGKYWTLTATGGVQSTA 327
           E+++  +K   R +  K W  T +  + +TA
Sbjct: 142 ELEKKAEKKLPRDNLAKEWFNTDSMTLNNTA 172


>gi|45643129 guanine nucleotide binding protein-like 3 isoform 2
           [Homo sapiens]
          Length = 537

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 286 DEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTAS 328
           D+++DQET   E+D ++        TG+  +   T G QST S
Sbjct: 475 DKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRS 517


>gi|45643127 guanine nucleotide binding protein-like 3 isoform 2
           [Homo sapiens]
          Length = 537

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 286 DEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTAS 328
           D+++DQET   E+D ++        TG+  +   T G QST S
Sbjct: 475 DKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRS 517


>gi|45593130 guanine nucleotide binding protein-like 3 isoform 1
           [Homo sapiens]
          Length = 549

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 286 DEETDQETFQLEIDRDTKKCAFRTHTGKYWTLTATGGVQSTAS 328
           D+++DQET   E+D ++        TG+  +   T G QST S
Sbjct: 487 DKDSDQETVDEEVDENSSGMFAAEETGEALSEETTAGEQSTRS 529


>gi|117606360 ADP-ribosylation factor guanine nucleotide factor 6
           isoform a [Homo sapiens]
          Length = 1047

 Score = 29.6 bits (65), Expect = 6.6
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 8/78 (10%)

Query: 410 SYDVFQLEFNDGAYNIKDSTGKYWTVGSDSAVTSSGDTPVDFFFEFCDYNKVAIKVGGRY 469
           S DV+  +F      I D+T  Y++  S   + S  D+   F        +  IK GG++
Sbjct: 437 STDVYSSQFE----TILDNTSLYYSAESLETLYSEPDSYFSFEMPLTPMIQQRIKEGGQF 492

Query: 470 LK----GDHAGVLKASAE 483
           L+    G H  +L  SA+
Sbjct: 493 LERTSGGGHQDILSVSAD 510


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,477,658
Number of Sequences: 37866
Number of extensions: 808752
Number of successful extensions: 1929
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1880
Number of HSP's gapped (non-prelim): 18
length of query: 493
length of database: 18,247,518
effective HSP length: 106
effective length of query: 387
effective length of database: 14,233,722
effective search space: 5508450414
effective search space used: 5508450414
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.