Guide to the Human Genome
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Name: MAPK4 Sequence: fasta or formatted (587aa) NCBI GI: 89276769
Description:

mitogen-activated protein kinase 4

Referenced in:

MAP Kinase Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         47           2
 C cysteine            1.5          9           1
 D aspartate           7.8         46           2
 E glutamate           7.5         44           2
 F phenylalanine       3.2         19           1
 G glycine             5.8         34           2
 H histidine           2.9         17           2
 I isoleucine          4.4         26           2
 K lysine              5.3         31           2
 L leucine            11.2         66           3
 M methionine          2.4         14           1
 N asparagine          2.2         13           2
 P proline             6.6         39           2
 Q glutamine           3.6         21           1
 R arginine            6.1         36           2
 S serine              8.2         48           3
 T threonine           3.2         19           1
 V valine              5.3         31           1
 W tryptophan          1.5          9           1
 Y tyrosine            3.1         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   mitogen-activated protein kinase 4 
MAPK6                 0.477   mitogen-activated protein kinase 6 
MAPK3                 0.206   mitogen-activated protein kinase 3 isoform 1 
MAPK1                 0.206   mitogen-activated protein kinase 1 
MAPK1                 0.206   mitogen-activated protein kinase 1 
MAPK3                 0.193   mitogen-activated protein kinase 3 isoform 2 
MAPK3                 0.186   mitogen-activated protein kinase 3 isoform 3 
MAPK7                 0.165   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.165   mitogen-activated protein kinase 7 isoform 1 
MAPK7                 0.165   mitogen-activated protein kinase 7 isoform 1 
MAPK12                0.155   mitogen-activated protein kinase 12 
MAPK13                0.155   mitogen-activated protein kinase 13 
MAPK14                0.148   mitogen-activated protein kinase 14 isoform 2 
MAPK15                0.147   mitogen-activated protein kinase 15 
MAPK11                0.147   mitogen-activated protein kinase 11 
MAPK14                0.147   mitogen-activated protein kinase 14 isoform 1 
NLK                   0.136   nemo like kinase 
MAPK14                0.128   mitogen-activated protein kinase 14 isoform 4 
MAPK7                 0.126   mitogen-activated protein kinase 7 isoform 2 
MAPK14                0.126   mitogen-activated protein kinase 14 isoform 3 
CRKRS                 0.121   Cdc2-related kinase, arginine/serine-rich isoform 2...
CRKRS                 0.121   Cdc2-related kinase, arginine/serine-rich isoform 1...
MAPK8                 0.119   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.119   mitogen-activated protein kinase 8 isoform JNK1 beta...
MAPK8                 0.117   mitogen-activated protein kinase 8 isoform JNK1 alph...
MAPK8                 0.117   mitogen-activated protein kinase 8 isoform JNK1 alpha...
MAPK10                0.116   mitogen-activated protein kinase 10 isoform 1 
MAPK10                0.116   mitogen-activated protein kinase 10 isoform 2 
MAPK10                0.116   mitogen-activated protein kinase 10 isoform 3 
CDC2L5                0.116   cell division cycle 2-like 5 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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