Guide to the Human Genome
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Name: PIR Sequence: fasta or formatted (290aa) NCBI GI: 4505823
Description:

pirin

Referenced in:

Iron, Copper, and Arsenic Metabolism

Other entries for this name:
alt mRNA [290aa] pirin
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         14           1
 C cysteine            0.7          2           1
 D aspartate           4.8         14           2
 E glutamate           8.3         24           2
 F phenylalanine       4.1         12           1
 G glycine            10.3         30           2
 H histidine           3.8         11           2
 I isoleucine          5.2         15           1
 K lysine              7.2         21           2
 L leucine             7.6         22           2
 M methionine          2.4          7           1
 N asparagine          3.1          9           1
 P proline             7.2         21           1
 Q glutamine           3.8         11           2
 R arginine            4.8         14           2
 S serine              7.6         22           2
 T threonine           4.5         13           1
 V valine              6.2         18           1
 W tryptophan          1.4          4           1
 Y tyrosine            2.1          6           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pirin 
PIR                   1.000   pirin 
C5orf34               0.012   hypothetical protein LOC375444 
OTOF                  0.010   otoferlin isoform a 
C11orf68              0.009   basophilic leukemia expressed protein BLES03 isofor...
GRIN2B                0.009   N-methyl-D-aspartate receptor subunit 2B precursor ...
NSUN2                 0.007   NOL1/NOP2/Sun domain family, member 2 
TPO                   0.007   thyroid peroxidase isoform b 
C11orf68              0.007   basophilic leukemia expressed protein BLES03 isofor...
KLHDC2                0.005   kelch domain containing 2 
KBTBD4                0.005   kelch repeat and BTB (POZ) domain containing 4 isof...
KBTBD4                0.005   kelch repeat and BTB (POZ) domain containing 4 isof...
C2orf80               0.005   hypothetical protein LOC389073 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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