Search of human proteins with 4505135

Search of human proteins with 4505135

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4505135 midkine [Homo sapiens]
         (143 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|59894792 midkine [Homo sapiens]                                    309   4e-85
gi|59894796 midkine [Homo sapiens]                                    309   4e-85
gi|4505135 midkine [Homo sapiens]                                     309   4e-85
gi|4506281 pleiotrophin [Homo sapiens]                                148   1e-36
gi|169204353 PREDICTED: hypothetical protein [Homo sapiens]            33   0.11 
gi|122937343 platelet endothelial aggregation receptor 1 [Homo s...    32   0.14 
gi|134031945 SCO-spondin [Homo sapiens]                                32   0.18 
gi|33624896 ADAM metallopeptidase with thrombospondin type 1 mot...    32   0.24 
gi|189242612 complement component 6 precursor [Homo sapiens]           32   0.24 
gi|169636415 complement component 6 precursor [Homo sapiens]           32   0.24 
gi|21265058 a disintegrin-like and metalloprotease (reprolysin t...    31   0.31 
gi|110611170 ADAM metallopeptidase with thrombospondin type 1 mo...    30   0.53 
gi|54400749 keratin associated protein 5-1 [Homo sapiens]              30   0.90 
gi|18490982 R-spondin 3 [Homo sapiens]                                 29   1.2  
gi|110347423 spondin 1, extracellular matrix protein [Homo sapiens]    29   1.2  
gi|147904700 semaphorin 5A [Homo sapiens]                              29   1.5  
gi|91982767 semaphorin 5B isoform 1 [Homo sapiens]                     28   2.0  
gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo...    28   2.0  
gi|21265043 ADAM metallopeptidase with thrombospondin type 1 mot...    28   2.6  
gi|73695936 ADAM metallopeptidase with thrombospondin type 1 mot...    28   2.6  
gi|21265034 ADAM metallopeptidase with thrombospondin type 1 mot...    28   2.6  
gi|84490388 R-spondin1 [Homo sapiens]                                  28   2.6  
gi|239756609 PREDICTED: similar to hCG2045429 [Homo sapiens]           28   2.6  
gi|169183882 PREDICTED: hypothetical protein [Homo sapiens]            28   2.6  
gi|239751097 PREDICTED: similar to hCG2045429 [Homo sapiens]           28   2.6  
gi|169210070 PREDICTED: similar to hCG2045429 [Homo sapiens]           28   2.6  
gi|94536854 thrombospondin, type I, domain containing 4 [Homo sa...    28   2.6  
gi|221136803 zinc finger protein 776 [Homo sapiens]                    28   2.6  
gi|216547715 basic helix-loop-helix domain containing, class B, ...    28   3.4  
gi|216547682 basic helix-loop-helix domain containing, class B, ...    28   3.4  

>gi|59894792 midkine [Homo sapiens]
          Length = 143

 Score =  309 bits (792), Expect = 4e-85
 Identities = 143/143 (100%), Positives = 143/143 (100%)

Query: 1   MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT 60
           MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT
Sbjct: 1   MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT 60

Query: 61  CGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETI 120
           CGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETI
Sbjct: 61  CGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETI 120

Query: 121 RVTKPCTPKTKAKAKAKKGKGKD 143
           RVTKPCTPKTKAKAKAKKGKGKD
Sbjct: 121 RVTKPCTPKTKAKAKAKKGKGKD 143


>gi|59894796 midkine [Homo sapiens]
          Length = 143

 Score =  309 bits (792), Expect = 4e-85
 Identities = 143/143 (100%), Positives = 143/143 (100%)

Query: 1   MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT 60
           MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT
Sbjct: 1   MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT 60

Query: 61  CGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETI 120
           CGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETI
Sbjct: 61  CGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETI 120

Query: 121 RVTKPCTPKTKAKAKAKKGKGKD 143
           RVTKPCTPKTKAKAKAKKGKGKD
Sbjct: 121 RVTKPCTPKTKAKAKAKKGKGKD 143


>gi|4505135 midkine [Homo sapiens]
          Length = 143

 Score =  309 bits (792), Expect = 4e-85
 Identities = 143/143 (100%), Positives = 143/143 (100%)

Query: 1   MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT 60
           MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT
Sbjct: 1   MQHRGFLLLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT 60

Query: 61  CGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETI 120
           CGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETI
Sbjct: 61  CGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETI 120

Query: 121 RVTKPCTPKTKAKAKAKKGKGKD 143
           RVTKPCTPKTKAKAKAKKGKGKD
Sbjct: 121 RVTKPCTPKTKAKAKAKKGKGKD 143


>gi|4506281 pleiotrophin [Homo sapiens]
          Length = 168

 Score =  148 bits (374), Expect = 1e-36
 Identities = 68/144 (47%), Positives = 95/144 (65%), Gaps = 9/144 (6%)

Query: 8   LLTLLALLALTSAVAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGFREGT-----CG 62
           L  +  L A+ +A A KK+K +K    S+C EW W  C P+S DCG+G REGT     C 
Sbjct: 18  LAFIFILAAVDTAEAGKKEKPEKKVKKSDCGEWQWSVCVPTSGDCGLGTREGTRTGAECK 77

Query: 63  AQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTLKKARYNAQCQETIRV 122
              +  RC++PCNWKK+FGA+CKY+F+ WG CD  T  K R G+LK+A +NA+CQ+T+ +
Sbjct: 78  QTMKTQRCKIPCNWKKQFGAECKYQFQAWGECDLNTALKTRTGSLKRALHNAECQKTVTI 137

Query: 123 TKPC----TPKTKAKAKAKKGKGK 142
           +KPC     PK +A++K KK +GK
Sbjct: 138 SKPCGKLTKPKPQAESKKKKKEGK 161


>gi|169204353 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 214

 Score = 32.7 bits (73), Expect = 0.11
 Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 32  GPGSECA--EWAWGPCTPSSKDCGVGFREGTCGAQ 64
           GP   CA   W+W   + +S+ CG G R  TC AQ
Sbjct: 146 GPQLHCAWTVWSWAVPSSASRACGDGHRRSTCQAQ 180


>gi|122937343 platelet endothelial aggregation receptor 1 [Homo
           sapiens]
          Length = 1037

 Score = 32.3 bits (72), Expect = 0.14
 Identities = 23/72 (31%), Positives = 30/72 (41%), Gaps = 8/72 (11%)

Query: 35  SECAEWAWGPCTPSSKDCGVGF----REGTCGAQT--QRIRCRVPCNWKKEFGADCKYKF 88
           SECA   WGP       CG       + G C   +  Q   C  PC     +G  C+++ 
Sbjct: 133 SECAPGMWGPQCDKPCSCGNNSSCDPKSGVCSCPSGLQPPNCLQPCT-PGYYGPACQFRC 191

Query: 89  ENWGA-CDGGTG 99
           +  GA CD  TG
Sbjct: 192 QCHGAPCDPQTG 203


>gi|134031945 SCO-spondin [Homo sapiens]
          Length = 5147

 Score = 32.0 bits (71), Expect = 0.18
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 5/32 (15%)

Query: 32   GPGSECAEWAWGPCTPSSKDCGVGFREGTCGA 63
            GPG E     WGP +P S  CG G+R  T G+
Sbjct: 3041 GPGGE-----WGPWSPCSVPCGGGYRNRTRGS 3067



 Score = 28.9 bits (63), Expect = 1.5
 Identities = 12/27 (44%), Positives = 15/27 (55%), Gaps = 3/27 (11%)

Query: 32   GPG---SECAEWAWGPCTPSSKDCGVG 55
            GPG     C+  +W P  P S+ CGVG
Sbjct: 3939 GPGCGAGNCSWTSWAPWEPCSRSCGVG 3965



 Score = 27.7 bits (60), Expect = 3.4
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)

Query: 41   AWGPCTPSSKDCGVGF--REGTC 61
            +WGP  P S+ CG G   R G+C
Sbjct: 4312 SWGPWGPCSRSCGPGLASRSGSC 4334



 Score = 27.7 bits (60), Expect = 3.4
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 9/52 (17%)

Query: 33   PGS--ECAEWA-WGPCTPSSKDCGVGFR------EGTCGAQTQRIRCRVPCN 75
            PG+  +  +W+ WGP +P    C  GFR      E  CG   +    +  CN
Sbjct: 4609 PGACPDSCQWSLWGPWSPCQVPCSGGFRLRWREAEALCGGGCREPWAQESCN 4660



 Score = 26.2 bits (56), Expect = 9.9
 Identities = 21/73 (28%), Positives = 26/73 (35%), Gaps = 11/73 (15%)

Query: 31   GGPGSECAEWAWGPCTPSSKDCGVGFREGTCGAQTQRIRCRVPCNWKKEF-GADCKYKFE 89
            GG    C   AW    P  + CG G           R R R P N    + GA C+   +
Sbjct: 2710 GGCPLPCGWSAWSSWAPCDRSCGSGV----------RARFRSPSNPPAAWGGAPCEGDRQ 2759

Query: 90   NWGACDGGTGTKV 102
                C    GT+V
Sbjct: 2760 ELQGCHTVCGTEV 2772


>gi|33624896 ADAM metallopeptidase with thrombospondin type 1 motif, 9
            preproprotein [Homo sapiens]
          Length = 1935

 Score = 31.6 bits (70), Expect = 0.24
 Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 14/85 (16%)

Query: 34   GSECAEWAWGPCTPSSKDCGVGFREGTCGAQ--TQRIRCRVPCN--WKKEFGADCK---- 85
            G  C +W  G  +  S  CG G ++   G Q  T +I     CN   + E   DC+    
Sbjct: 1495 GGRCPKWKAGAWSQCSVSCGRGVQQRHVGCQIGTHKIARETECNPYTRPESERDCQGPRC 1554

Query: 86   ----YKFENWGACDG--GTGTKVRQ 104
                ++ E W  C    G G++ R+
Sbjct: 1555 PLYTWRAEEWQECTKTCGEGSRYRK 1579



 Score = 28.1 bits (61), Expect = 2.6
 Identities = 26/91 (28%), Positives = 36/91 (39%), Gaps = 17/91 (18%)

Query: 38   AEWAWGPCTPSSKDCGVGFREGTC------GAQTQRIRCR---VPCNWKKEFGADC-KYK 87
            A W+ GP +  S  CG G ++         G+  +   C+    P   +K  G  C K+K
Sbjct: 1443 AAWSTGPWSSCSVSCGRGHKQRNVYCMAKDGSHLESDYCKHLAKPHGHRKCRGGRCPKWK 1502

Query: 88   FENWGACDGGTGTKVRQ-------GTLKKAR 111
               W  C    G  V+Q       GT K AR
Sbjct: 1503 AGAWSQCSVSCGRGVQQRHVGCQIGTHKIAR 1533



 Score = 26.2 bits (56), Expect = 9.9
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query: 36   ECAEWAWGPCTPSSKDCGVGFR 57
            ECA W  GP    S  CG G++
Sbjct: 1107 ECASWQAGPWGQCSVTCGQGYQ 1128


>gi|189242612 complement component 6 precursor [Homo sapiens]
          Length = 934

 Score = 31.6 bits (70), Expect = 0.24
 Identities = 34/132 (25%), Positives = 46/132 (34%), Gaps = 28/132 (21%)

Query: 32  GPGSECAEWAWGPCTPSSKDCGVG-----------------FREGTCGAQTQRIRCRVPC 74
           G    C  +AW   T  SK C  G                 F E  C  Q  R      C
Sbjct: 19  GQACFCDHYAWTQWTSCSKTCNSGTQSRHRQIVVDKYYQENFCEQICSKQETR-----EC 73

Query: 75  NWKKEFGADCKY-KFENWGACDG--GTGTKVRQGTLKKARYNAQ-CQETIRVTKPCTPKT 130
           NW++    +C    F  W  CD      +KVR   L+ +++  Q C   +   +PC P  
Sbjct: 74  NWQR-CPINCLLGDFGPWSDCDPCIEKQSKVR-SVLRPSQFGGQPCTAPLVAFQPCIPSK 131

Query: 131 KAKAKAKKGKGK 142
             K +    K K
Sbjct: 132 LCKIEEADCKNK 143


>gi|169636415 complement component 6 precursor [Homo sapiens]
          Length = 934

 Score = 31.6 bits (70), Expect = 0.24
 Identities = 34/132 (25%), Positives = 46/132 (34%), Gaps = 28/132 (21%)

Query: 32  GPGSECAEWAWGPCTPSSKDCGVG-----------------FREGTCGAQTQRIRCRVPC 74
           G    C  +AW   T  SK C  G                 F E  C  Q  R      C
Sbjct: 19  GQACFCDHYAWTQWTSCSKTCNSGTQSRHRQIVVDKYYQENFCEQICSKQETR-----EC 73

Query: 75  NWKKEFGADCKY-KFENWGACDG--GTGTKVRQGTLKKARYNAQ-CQETIRVTKPCTPKT 130
           NW++    +C    F  W  CD      +KVR   L+ +++  Q C   +   +PC P  
Sbjct: 74  NWQR-CPINCLLGDFGPWSDCDPCIEKQSKVR-SVLRPSQFGGQPCTAPLVAFQPCIPSK 131

Query: 131 KAKAKAKKGKGK 142
             K +    K K
Sbjct: 132 LCKIEEADCKNK 143


>gi|21265058 a disintegrin-like and metalloprotease (reprolysin
           type) with thrombospondin type 1 motif, 15 preproprotein
           [Homo sapiens]
          Length = 950

 Score = 31.2 bits (69), Expect = 0.31
 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 8/47 (17%)

Query: 34  GSECAEW---AWGPCTPSSKDCGVGF--REGTCGAQTQRIRCRVPCN 75
           G  C  W   AW PC   SK CG GF  R   C     R+  R  CN
Sbjct: 891 GEPCPTWELSAWSPC---SKSCGRGFQRRSLKCVGHGGRLLARDQCN 934


>gi|110611170 ADAM metallopeptidase with thrombospondin type 1
           motif, 17 preproprotein [Homo sapiens]
          Length = 1095

 Score = 30.4 bits (67), Expect = 0.53
 Identities = 26/98 (26%), Positives = 37/98 (37%), Gaps = 14/98 (14%)

Query: 38  AEWAWGPCTPSSKDCGVGF--REGTCGAQ--------TQRIRC--RVPCNWKKEFGADCK 85
           + W  GP +P S  C  GF  RE TC  Q        T+ + C    P   +   G DC 
Sbjct: 863 SRWVAGPWSPCSATCEKGFQHREVTCVYQLQNGTHVATRPLYCPGPRPAAVQSCEGQDCL 922

Query: 86  --YKFENWGACDGGTGTKVRQGTLKKARYNAQCQETIR 121
             ++   W  C    G  V + T+       +C  + R
Sbjct: 923 SIWEASEWSQCSASCGKGVWKRTVACTNSQGKCDASTR 960


>gi|54400749 keratin associated protein 5-1 [Homo sapiens]
          Length = 278

 Score = 29.6 bits (65), Expect = 0.90
 Identities = 19/60 (31%), Positives = 23/60 (38%), Gaps = 5/60 (8%)

Query: 30  KGGPGSECAEWAWG----PCTPSSKDCG-VGFREGTCGAQTQRIRCRVPCNWKKEFGADC 84
           KGG GS C     G     C  S   CG     +G CG+   +  C  PC      G+ C
Sbjct: 194 KGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCCKPCCCSSGCGSSC 253


>gi|18490982 R-spondin 3 [Homo sapiens]
          Length = 272

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 13/26 (50%), Positives = 15/26 (57%), Gaps = 3/26 (11%)

Query: 36  ECAEW-AWGPCTPSSKDCGVGFREGT 60
           E +EW  W PCT   K C  GF+ GT
Sbjct: 149 EVSEWNPWSPCTKKGKTC--GFKRGT 172


>gi|110347423 spondin 1, extracellular matrix protein [Homo sapiens]
          Length = 807

 Score = 29.3 bits (64), Expect = 1.2
 Identities = 27/109 (24%), Positives = 38/109 (34%), Gaps = 22/109 (20%)

Query: 35  SECAEWAWGPCTPSSKDCGVGFRE------------GTCGAQT-QRIRCRVP-CNWKKEF 80
           S C    WG     S  CG+G ++              C A+T Q  +C +P C+     
Sbjct: 557 SSCLMTEWGEWDECSATCGMGMKKRHRMIKMNPADGSMCKAETSQAEKCMMPECH----- 611

Query: 81  GADCKYK-FENWGACD--GGTGTKVRQGTLKKARYNAQCQETIRVTKPC 126
              C    +  W  C    G G + RQ  LK       C E +   + C
Sbjct: 612 TIPCLLSPWSEWSDCSVTCGKGMRTRQRMLKSLAELGDCNEDLEQVEKC 660


>gi|147904700 semaphorin 5A [Homo sapiens]
          Length = 1074

 Score = 28.9 bits (63), Expect = 1.5
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 9/57 (15%)

Query: 32  GPGSECAEWA----WGPCT---PSSKDCGVGF--REGTCGAQTQRIRCRVPCNWKKE 79
           GPG E A  +    W P T   P S  CG+GF  R+ +C   T R   RV     +E
Sbjct: 584 GPGMEIANCSRNGGWTPWTSWSPCSTTCGIGFQVRQRSCSNPTPRHGGRVCVGQNRE 640


>gi|91982767 semaphorin 5B isoform 1 [Homo sapiens]
          Length = 1151

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 10/17 (58%), Positives = 13/17 (76%)

Query: 41  AWGPCTPSSKDCGVGFR 57
           AWGP +  S+DC +GFR
Sbjct: 858 AWGPWSSCSRDCELGFR 874


>gi|112789555 ADAM metallopeptidase with thrombospondin type 1 motif,
            19 preproprotein [Homo sapiens]
          Length = 1207

 Score = 28.5 bits (62), Expect = 2.0
 Identities = 26/110 (23%), Positives = 41/110 (37%), Gaps = 14/110 (12%)

Query: 21   VAKKKDKVKKGGPGSECAEWAWGPCTPSSKDCGVGF--REGTCGAQTQR---IRCR---- 71
            + K + +++K         W     TP S+ CG G   R+  C  Q      IR R    
Sbjct: 961  LTKPEPQIRKCNEQPCQTRWMMTEWTPCSRTCGKGMQSRQVACTQQLSNGTLIRARERDC 1020

Query: 72   ---VPCNWKKEFGADCKYKFEN--WGACDGGTGTKVRQGTLKKARYNAQC 116
                P + ++  G DC   +E   W  C    G  +R  T++      +C
Sbjct: 1021 IGPKPASAQRCEGQDCMTVWEAGVWSECSVKCGKGIRHRTVRCTNPRKKC 1070


>gi|21265043 ADAM metallopeptidase with thrombospondin type 1 motif,
           13 isoform 3 preproprotein [Homo sapiens]
          Length = 1340

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 10/58 (17%)

Query: 41  AWGPCTPSSKDCGVGFREGTCGAQTQRIRCRVP---CNWKKEFGADCKYKFENWGACD 95
           +WGP +P S+ CG        G  T+R +C  P      +   GAD + +  N  AC+
Sbjct: 358 SWGPRSPCSRSCG-------GGVVTRRRQCNNPRPAFGGRACVGADLQAEMCNTQACE 408


>gi|73695936 ADAM metallopeptidase with thrombospondin type 1 motif,
           13 isoform 2 preproprotein [Homo sapiens]
          Length = 1371

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 10/58 (17%)

Query: 41  AWGPCTPSSKDCGVGFREGTCGAQTQRIRCRVP---CNWKKEFGADCKYKFENWGACD 95
           +WGP +P S+ CG        G  T+R +C  P      +   GAD + +  N  AC+
Sbjct: 389 SWGPRSPCSRSCG-------GGVVTRRRQCNNPRPAFGGRACVGADLQAEMCNTQACE 439


>gi|21265034 ADAM metallopeptidase with thrombospondin type 1 motif,
           13 isoform 1 preproprotein [Homo sapiens]
          Length = 1427

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 10/58 (17%)

Query: 41  AWGPCTPSSKDCGVGFREGTCGAQTQRIRCRVP---CNWKKEFGADCKYKFENWGACD 95
           +WGP +P S+ CG        G  T+R +C  P      +   GAD + +  N  AC+
Sbjct: 389 SWGPRSPCSRSCG-------GGVVTRRRQCNNPRPAFGGRACVGADLQAEMCNTQACE 439


>gi|84490388 R-spondin1 [Homo sapiens]
          Length = 263

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 26/98 (26%), Positives = 39/98 (39%), Gaps = 30/98 (30%)

Query: 36  ECAEWA-WGPCTPSSKDCGVGFREGT-----------------CGAQTQRIRC---RVPC 74
           E +EW+ WGPC+   + C  GFR G+                 C    +  RC   RVPC
Sbjct: 149 EMSEWSPWGPCSKKQQLC--GFRRGSEERTRRVLHAPVGDHAACSDTKETRRCTVRRVPC 206

Query: 75  --NWKKEFGADCKYKFENWGAC-----DGGTGTKVRQG 105
               K+  G   + +  N         + G G++ R+G
Sbjct: 207 PEGQKRRKGGQGRRENANRNLARKESKEAGAGSRRRKG 244


>gi|239756609 PREDICTED: similar to hCG2045429 [Homo sapiens]
          Length = 178

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 15/60 (25%)

Query: 92  GACDGGTGTKVRQGTLKKARYNAQC----QETI-----------RVTKPCTPKTKAKAKA 136
           G+C     +KV   +LK AR+ ++     Q+T            R  +PCTP T   ++A
Sbjct: 39  GSCSAPPASKVTSASLKTARHGSEAAHCSQQTCARGQRVKEAGSRRARPCTPHTAGSSRA 98


>gi|169183882 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 295

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 8/74 (10%)

Query: 31  GGPGSECAEWAWGPCTPSSKDCGVGFREGTCGAQTQRIRCRVPCNWKKEFGADC-KYKFE 89
           G  G  C    WG   P     GVG R    G++   +  RVP     + G++C  ++  
Sbjct: 16  GAQGPRCGVSVWGCRAPDVGSVGVGRRVPDAGSEC--VGHRVP-----DAGSECVGHRAP 68

Query: 90  NWGACDGGTGTKVR 103
           + G+  GG G  +R
Sbjct: 69  DAGSVCGGAGPPMR 82


>gi|239751097 PREDICTED: similar to hCG2045429 [Homo sapiens]
          Length = 178

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 15/60 (25%)

Query: 92  GACDGGTGTKVRQGTLKKARYNAQC----QETI-----------RVTKPCTPKTKAKAKA 136
           G+C     +KV   +LK AR+ ++     Q+T            R  +PCTP T   ++A
Sbjct: 39  GSCSAPPASKVTSASLKTARHGSEAAHCSQQTCARGQRVKEAGSRRARPCTPHTAGSSRA 98


>gi|169210070 PREDICTED: similar to hCG2045429 [Homo sapiens]
          Length = 178

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 15/60 (25%)

Query: 92  GACDGGTGTKVRQGTLKKARYNAQC----QETI-----------RVTKPCTPKTKAKAKA 136
           G+C     +KV   +LK AR+ ++     Q+T            R  +PCTP T   ++A
Sbjct: 39  GSCSAPPASKVTSASLKTARHGSEAAHCSQQTCARGQRVKEAGSRRARPCTPHTAGSSRA 98


>gi|94536854 thrombospondin, type I, domain containing 4 [Homo
          sapiens]
          Length = 1018

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 31 GGPGSECAEWAWGPCTPSSKDCGVGFREGT--CGAQTQRIR 69
          GG G+     AWGP +  S+ C  G  E T  C  ++ R+R
Sbjct: 48 GGGGAPGVWGAWGPWSACSRSCSGGVMEQTRPCLPRSYRLR 88


>gi|221136803 zinc finger protein 776 [Homo sapiens]
          Length = 518

 Score = 28.1 bits (61), Expect = 2.6
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 2/66 (3%)

Query: 48  SSKDCGVGFREGTCGAQTQRIRCRVPCNWKKEFGADCKYKFENWGACDGGTGTKVRQGTL 107
           SS  C  G ++ T   QT  I+   P   +  +   C  K   WG C    G  + QGT 
Sbjct: 51  SSLGCWYGAKDETPSKQTLSIQQESPL--RTHWTGVCTKKVHLWGMCGPLLGDILHQGTQ 108

Query: 108 KKARYN 113
              + N
Sbjct: 109 HNQKLN 114


>gi|216547715 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 27.7 bits (60), Expect = 3.4
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 100 TKVRQGTLKKARYNAQC---QETIRVTKPCTPKTKAKAKAKKGKGKD 143
           T+ +  T KKA   A+    +E   V +P   KT+AKAKAK G   D
Sbjct: 8   TRAQAKTEKKAAIQAKAGAEREATGVVRPVA-KTRAKAKAKTGSKTD 53


>gi|216547682 basic helix-loop-helix domain containing, class B, 9
           [Homo sapiens]
          Length = 547

 Score = 27.7 bits (60), Expect = 3.4
 Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 4/47 (8%)

Query: 100 TKVRQGTLKKARYNAQC---QETIRVTKPCTPKTKAKAKAKKGKGKD 143
           T+ +  T KKA   A+    +E   V +P   KT+AKAKAK G   D
Sbjct: 8   TRAQAKTEKKAAIQAKAGAEREATGVVRPVA-KTRAKAKAKTGSKTD 53


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.439 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,370,082
Number of Sequences: 37866
Number of extensions: 289338
Number of successful extensions: 941
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 867
Number of HSP's gapped (non-prelim): 121
length of query: 143
length of database: 18,247,518
effective HSP length: 92
effective length of query: 51
effective length of database: 14,763,846
effective search space: 752956146
effective search space used: 752956146
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.