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Search of human proteins with 4504711
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4504711 insulin-like 4 precursor [Homo sapiens]
(139 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4504711 insulin-like 4 precursor [Homo sapiens] 289 6e-79
gi|5902052 relaxin 1 preproprotein [Homo sapiens] 45 2e-05
gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens] 44 4e-05
gi|21361116 versican isoform 1 [Homo sapiens] 30 0.48
gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens] 29 1.1
gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens] 29 1.1
gi|4758420 glial cells missing homolog 2 [Homo sapiens] 29 1.1
gi|219803946 within bgcn homolog isoform 2 [Homo sapiens] 29 1.4
gi|14150139 within bgcn homolog isoform 1 [Homo sapiens] 29 1.4
gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens] 28 1.8
gi|4557803 Niemann-Pick disease, type C1 precursor [Homo sapiens] 28 1.8
gi|62988344 P antigen family, member 3 (prostate associated) [Ho... 28 3.1
gi|115647981 glutamine and serine rich 1 [Homo sapiens] 28 3.1
gi|92091572 dedicator of cytokinesis 4 [Homo sapiens] 27 4.1
gi|209862789 microtubule associated monoxygenase, calponin and L... 27 4.1
gi|58330892 interferon-induced protein with tetratricopeptide re... 27 5.4
gi|116534937 interferon-induced protein with tetratricopeptide r... 27 7.0
gi|148612816 RecQ protein-like 5 isoform 1 [Homo sapiens] 27 7.0
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ... 26 9.1
gi|93102424 hypothetical protein LOC23116 [Homo sapiens] 26 9.1
>gi|4504711 insulin-like 4 precursor [Homo sapiens]
Length = 139
Score = 289 bits (739), Expect = 6e-79
Identities = 139/139 (100%), Positives = 139/139 (100%)
Query: 1 MASLFRSYLPAIWLLLSQLLRESLAAELRGCGPRFGKHLLSYCPMPEKTFTTTPGGWLLE 60
MASLFRSYLPAIWLLLSQLLRESLAAELRGCGPRFGKHLLSYCPMPEKTFTTTPGGWLLE
Sbjct: 1 MASLFRSYLPAIWLLLSQLLRESLAAELRGCGPRFGKHLLSYCPMPEKTFTTTPGGWLLE 60
Query: 61 SGRPKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKKIILSRKKRSGRHRF 120
SGRPKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKKIILSRKKRSGRHRF
Sbjct: 61 SGRPKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKKIILSRKKRSGRHRF 120
Query: 121 DPFCCEVICDDGTSVKLCT 139
DPFCCEVICDDGTSVKLCT
Sbjct: 121 DPFCCEVICDDGTSVKLCT 139
>gi|5902052 relaxin 1 preproprotein [Homo sapiens]
Length = 185
Score = 45.1 bits (105), Expect = 2e-05
Identities = 38/113 (33%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 1 MASLFRSYLPAIWLLLSQLLRESLAAE-----LRGCGPRFGKHLLSYCPMPEKTFTTTPG 55
M LF +L LLL+Q R ++AA+ ++ CG + ++ C M + +
Sbjct: 1 MPRLFLFHLLEFCLLLNQFSR-AVAAKWKDDVIKLCGRELVRAQIAICGMSTWSKRSLSQ 59
Query: 56 GWLLESGRP-KEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKKI 107
++ RP E+V + NKD + + EFI NL PELK LSE QPSL ++
Sbjct: 60 EDAPQTPRPVAEIVPSFINKDTETIIIMLEFIANLPPELKAALSERQPSLPEL 112
>gi|20143933 relaxin 2 isoform 1 preproprotein [Homo sapiens]
Length = 185
Score = 43.9 bits (102), Expect = 4e-05
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 1 MASLFRSYLPAIWLLLSQLLR---ESLAAE-LRGCGPRFGKHLLSYCPMPEKTFTTTPGG 56
M LF +L + LLL+Q R +S E ++ CG + ++ C M + +
Sbjct: 1 MPRLFFFHLLGVCLLLNQFSRAVADSWMEEVIKLCGRELVRAQIAICGMSTWSKRSLSQE 60
Query: 57 WLLESGRP-KEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKKI 107
++ RP E+V + NKD + + SEF+ NL ELK LSE QP+L ++
Sbjct: 61 DAPQTPRPVAEIVPSFINKDTETINMMSEFVANLPQELKLTLSEMQPALPQL 112
>gi|21361116 versican isoform 1 [Homo sapiens]
Length = 3396
Score = 30.4 bits (67), Expect = 0.48
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 44 PMPEKTFTTTPG--GWLLESGRPKEMVSTSNNKDGQALGTTSEFIPNL 89
P+P K+ T P G E+ +M +S DGQA+ SE IP L
Sbjct: 2694 PIPRKSATVIPEIEGIKAEAKALDDMFESSTLSDGQAIADQSEIIPTL 2741
>gi|169167792 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 29.3 bits (64), Expect = 1.1
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 21/105 (20%)
Query: 38 HLLSYCPMPEKTFTTTPGGWLLESGRPKEM-VSTSNNKDG----------------QALG 80
HL S+C +P KT T+ GW + + K++ + S +DG G
Sbjct: 36 HLKSFCQVPIKTATS---GWGAKKKKAKQLGILLSRKEDGIPPRSCVSCGEEKPLVPRRG 92
Query: 81 TTSEFIP-NLSPELKKPLSEGQPSLKKIILSRKKRSGRHRFDPFC 124
+S IP N+S + P +G LK + +S + + P C
Sbjct: 93 ASSPQIPLNISGSSEPPPQKGDAKLKGVRMSTLQTAETKPRTPTC 137
>gi|88987622 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 320
Score = 29.3 bits (64), Expect = 1.1
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 21/105 (20%)
Query: 38 HLLSYCPMPEKTFTTTPGGWLLESGRPKEM-VSTSNNKDG----------------QALG 80
HL S+C +P KT T+ GW + + K++ + S +DG G
Sbjct: 36 HLKSFCQVPIKTATS---GWGAKKKKAKQLGILLSRKEDGIPPRSCVSCGEEKPLVPRRG 92
Query: 81 TTSEFIP-NLSPELKKPLSEGQPSLKKIILSRKKRSGRHRFDPFC 124
+S IP N+S + P +G LK + +S + + P C
Sbjct: 93 ASSPQIPLNISGSSEPPPQKGDAKLKGVRMSTLQTAETKPRTPTC 137
>gi|4758420 glial cells missing homolog 2 [Homo sapiens]
Length = 506
Score = 29.3 bits (64), Expect = 1.1
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Query: 50 FTTTPGGWLLESGRPKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKKIIL 109
FT GW G+P +V +N+ QA+ T + P L G P+L+ +I
Sbjct: 326 FTNKQHGWKPALGKPS-LVERTNHGQFQAMATRPYYNPELPCRYLTTPPPGAPALQTVIT 384
Query: 110 SRKKRS 115
+ K S
Sbjct: 385 TTTKVS 390
>gi|219803946 within bgcn homolog isoform 2 [Homo sapiens]
Length = 203
Score = 28.9 bits (63), Expect = 1.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 64 PKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSE-----GQPSLKKIILSRKKRSGRH 118
P+E V NK + + E P LSPE P++ G+P L K KR +
Sbjct: 37 PQEEVPVYENKYVKFFKSKPELPPGLSPEATAPVTPSRPEGGEPGLSKTAKRNLKRKEKR 96
Query: 119 R 119
R
Sbjct: 97 R 97
>gi|14150139 within bgcn homolog isoform 1 [Homo sapiens]
Length = 204
Score = 28.9 bits (63), Expect = 1.4
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 64 PKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSE-----GQPSLKKIILSRKKRSGRH 118
P+E V NK + + E P LSPE P++ G+P L K KR +
Sbjct: 38 PQEEVPVYENKYVKFFKSKPELPPGLSPEATAPVTPSRPEGGEPGLSKTAKRNLKRKEKR 97
Query: 119 R 119
R
Sbjct: 98 R 98
>gi|51464815 PREDICTED: similar to hCG1745223 [Homo sapiens]
Length = 319
Score = 28.5 bits (62), Expect = 1.8
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 21/91 (23%)
Query: 38 HLLSYCPMPEKTFTTTPGGWLLESGRPKEM-VSTSNNKDG----------------QALG 80
HL S+C +P KT T+ GW + + K++ + S +DG G
Sbjct: 36 HLKSFCQVPIKTATS---GWGAKKKKAKQLGILLSRKEDGIPPRSCVSCGEEKPLVPRRG 92
Query: 81 TTSEFIP-NLSPELKKPLSEGQPSLKKIILS 110
+S IP N+S + P +G LK + +S
Sbjct: 93 ASSPQIPLNISGSSEPPPQKGDAKLKGVRMS 123
>gi|4557803 Niemann-Pick disease, type C1 precursor [Homo sapiens]
Length = 1278
Score = 28.5 bits (62), Expect = 1.8
Identities = 12/24 (50%), Positives = 16/24 (66%)
Query: 113 KRSGRHRFDPFCCEVICDDGTSVK 136
KR ++R D FCC +DGTSV+
Sbjct: 788 KRQEKNRLDIFCCVRGAEDGTSVQ 811
>gi|62988344 P antigen family, member 3 (prostate associated) [Homo
sapiens]
Length = 113
Score = 27.7 bits (60), Expect = 3.1
Identities = 13/36 (36%), Positives = 17/36 (47%)
Query: 69 STSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSL 104
S + + G EF+PNL P EGQPS+
Sbjct: 78 SKTGGERGDGPNVKGEFLPNLEPVKIPEAGEGQPSV 113
>gi|115647981 glutamine and serine rich 1 [Homo sapiens]
Length = 1735
Score = 27.7 bits (60), Expect = 3.1
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 69 STSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKK 106
S+S D A TT+ P++ P++K+P + +P KK
Sbjct: 1463 SSSKTSDPLASKTTTTKAPSVKPKVKQPKVKAEPPPKK 1500
>gi|92091572 dedicator of cytokinesis 4 [Homo sapiens]
Length = 1966
Score = 27.3 bits (59), Expect = 4.1
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 46 PEKTFTTTPGGWLLESGRPKEMVSTS 71
PEK TP W L+SG+ + +S S
Sbjct: 1757 PEKAVNPTPSSWSLDSGKEAKNMSDS 1782
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 27.3 bits (59), Expect = 4.1
Identities = 22/93 (23%), Positives = 36/93 (38%), Gaps = 17/93 (18%)
Query: 60 ESGRPKEMVSTSNNKDGQALGTTSEFIPNLSPELKKPLSEGQP----------------- 102
+SG P ++S G++ +S F P + + KK EG+P
Sbjct: 1678 DSGGPDGSFTSSEGSSGKSKKRSSLFSPRRNKKEKKSKGEGRPPEKPSSNLLEEAAAKPK 1737
Query: 103 SLKKIILSRKKRSGRHRFDPFCCEVICDDGTSV 135
SL K + S K+ + + D C G +V
Sbjct: 1738 SLWKSVFSGYKKDKKKKADDKSCPSTPSSGATV 1770
>gi|58330892 interferon-induced protein with tetratricopeptide
repeats 1-like [Homo sapiens]
Length = 474
Score = 26.9 bits (58), Expect = 5.4
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 97 LSEGQPSLKKIILSRKKRSGRHRFDPFCCEVICDDGTSVKLC 138
L+E Q L K+ + KK + R+ C EV C++G ++ C
Sbjct: 111 LAEAQTYLDKVENTCKKFANPSRYRMECPEVDCEEGWALAKC 152
>gi|116534937 interferon-induced protein with tetratricopeptide
repeats 1 isoform 2 [Homo sapiens]
Length = 478
Score = 26.6 bits (57), Expect = 7.0
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 97 LSEGQPSLKKIILSRKKRSGRHRFDPFCCEVICDDGTSVKLC 138
L+E Q L K+ KK S R+ C E+ C++G ++ C
Sbjct: 111 LAEAQTYLDKVENICKKLSNPFRYRMECPEIDCEEGWALLKC 152
>gi|148612816 RecQ protein-like 5 isoform 1 [Homo sapiens]
Length = 991
Score = 26.6 bits (57), Expect = 7.0
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 44 PMPEKTFTTTPGGWLLESGR---PKEMVSTSNNKDGQAL 79
P PEK ++ GG L GR +++++T+ +KD Q++
Sbjct: 726 PSPEKKAKSSSGGSSLAKGRASKKQQLLATAAHKDSQSI 764
>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
isoform 1 [Homo sapiens]
Length = 666
Score = 26.2 bits (56), Expect = 9.1
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 17/110 (15%)
Query: 10 PAIWLLLSQLLRESLAAELRGCGPRFGKHLLSYCPMPEKTFTTTPGGWLLESGRPKEMVS 69
P + +LS + R S A E G P CP P F+ P S R ++++
Sbjct: 410 PRVPDILSSVRRGSGAPEAEGPLP---------CPSPAP-FSPLPA----PSPRISDILN 455
Query: 70 TSNNKDG--QALGTTSEFIPN-LSPELKKPLSEGQPSLKKIILSRKKRSG 116
+ G +A G S P LSP L PLS P + I+ S ++ SG
Sbjct: 456 SVRRGSGTPEAEGPLSAGPPPCLSPALLGPLSSPSPRISDILNSVRRGSG 505
>gi|93102424 hypothetical protein LOC23116 [Homo sapiens]
Length = 1720
Score = 26.2 bits (56), Expect = 9.1
Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 11/70 (15%)
Query: 70 TSNNKDGQALGTTSEFIPNLSPELKKPLSEGQPSLKKIILSRKKRS-----GRHRFDPFC 124
TS +KD + +T +FIP+ K LS+G P + SRK+ S F+P C
Sbjct: 674 TSTSKDIEQF-STYDFIPSA----KLKLSQGMPVNDDLCFSRKRVSRNLFQNSRDFNPDC 728
Query: 125 CEVICDDGTS 134
+C GT+
Sbjct: 729 LP-LCAAGTT 737
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.424
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,240,156
Number of Sequences: 37866
Number of extensions: 304977
Number of successful extensions: 652
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 639
Number of HSP's gapped (non-prelim): 23
length of query: 139
length of database: 18,247,518
effective HSP length: 92
effective length of query: 47
effective length of database: 14,763,846
effective search space: 693900762
effective search space used: 693900762
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.