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Search of human proteins with 4504035
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|4504035 guanine monophosphate synthetase [Homo sapiens]
(693 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4504035 guanine monophosphate synthetase [Homo sapiens] 1382 0.0
gi|169166591 PREDICTED: similar to hCG1640714 [Homo sapiens] 233 6e-61
gi|169167309 PREDICTED: similar to hCG1640714 [Homo sapiens] 233 6e-61
gi|169790915 carbamoyl-phosphate synthetase 1 isoform a precurso... 39 0.016
gi|21361331 carbamoyl-phosphate synthetase 1 isoform b precursor... 39 0.016
gi|18105007 carbamoylphosphate synthetase 2/aspartate transcarba... 36 0.10
gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isof... 33 0.68
gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isofo... 33 0.68
gi|4505293 MYB-related protein B [Homo sapiens] 33 0.68
gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [H... 32 1.5
gi|21450832 spindle and KT associated 1 [Homo sapiens] 32 2.0
gi|88014625 spindle and KT associated 1 [Homo sapiens] 32 2.0
gi|41872583 Rho-associated, coiled-coil containing protein kinas... 30 5.8
gi|84000432 hypothetical protein LOC157769 [Homo sapiens] 30 5.8
gi|21361478 septin 6 isoform B [Homo sapiens] 30 7.5
gi|22035581 septin 6 isoform D [Homo sapiens] 30 7.5
gi|22035579 septin 6 isoform A [Homo sapiens] 30 7.5
gi|22035577 septin 6 isoform A [Homo sapiens] 30 7.5
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 30 7.5
gi|45267839 mesoderm induction early response 1, family member 2... 30 7.5
>gi|4504035 guanine monophosphate synthetase [Homo sapiens]
Length = 693
Score = 1382 bits (3577), Expect = 0.0
Identities = 693/693 (100%), Positives = 693/693 (100%)
Query: 1 MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP 60
MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP
Sbjct: 1 MALCNGDSKLENAGGDLKDGHHHYEGAVVILDAGAQYGKVIDRRVRELFVQSEIFPLETP 60
Query: 61 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK 120
AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK
Sbjct: 61 AFAIKEQGFRAIIISGGPNSVYAEDAPWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK 120
Query: 121 KSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANE 180
KSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANE
Sbjct: 121 KSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGNIVAGIANE 180
Query: 181 SKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVL 240
SKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVL
Sbjct: 181 SKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVL 240
Query: 241 VLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA 300
VLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA
Sbjct: 241 VLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAA 300
Query: 301 HSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPE 360
HSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPE
Sbjct: 301 HSFYNGTTTLPISDEDRTPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPE 360
Query: 361 EVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVR 420
EVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVR
Sbjct: 361 EVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVR 420
Query: 421 ILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPH 480
ILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPH
Sbjct: 421 ILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPH 480
Query: 481 TLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDW 540
TLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDW
Sbjct: 481 TLLQRVKACTTEEDQEKLMQITSLHSLNAFLLPIKTVGVQGDCRSYSYVCGISSKDEPDW 540
Query: 541 ESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILR 600
ESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILR
Sbjct: 541 ESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILR 600
Query: 601 ESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVE 660
ESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVE
Sbjct: 601 ESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVE 660
Query: 661 VVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE 693
VVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE
Sbjct: 661 VVLKMVTEIKKIPGISRIMYDLTSKPPGTTEWE 693
>gi|169166591 PREDICTED: similar to hCG1640714 [Homo sapiens]
Length = 597
Score = 233 bits (593), Expect = 6e-61
Identities = 116/125 (92%), Positives = 119/125 (95%)
Query: 555 HNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVI 614
H V+ IFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVI
Sbjct: 198 HPDQLVICIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVI 257
Query: 615 LTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEIKKIPG 674
LTPLHFDRDPLQKQPSCQRSVVIRTFITSD +TGIPATPGNEIPVEVVLKMVTEIKKIPG
Sbjct: 258 LTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTEIKKIPG 317
Query: 675 ISRIM 679
ISRI+
Sbjct: 318 ISRII 322
>gi|169167309 PREDICTED: similar to hCG1640714 [Homo sapiens]
Length = 597
Score = 233 bits (593), Expect = 6e-61
Identities = 116/125 (92%), Positives = 119/125 (95%)
Query: 555 HNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVI 614
H V+ IFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVI
Sbjct: 198 HPDQLVICIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVI 257
Query: 615 LTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEIKKIPG 674
LTPLHFDRDPLQKQPSCQRSVVIRTFITSD +TGIPATPGNEIPVEVVLKMVTEIKKIPG
Sbjct: 258 LTPLHFDRDPLQKQPSCQRSVVIRTFITSDSLTGIPATPGNEIPVEVVLKMVTEIKKIPG 317
Query: 675 ISRIM 679
ISRI+
Sbjct: 318 ISRII 322
>gi|169790915 carbamoyl-phosphate synthetase 1 isoform a precursor
[Homo sapiens]
Length = 1506
Score = 38.9 bits (89), Expect = 0.016
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 69 FRAIIISGGP-NSVYAEDAPWFDPAIFTIGK--------PVLGICYGMQMMNKVFGGTVH 119
+ I+I+GGP N AE P I + K P+ GI G + G +
Sbjct: 262 YDGILIAGGPGNPALAE------PLIQNVRKILESDRKEPLFGISTGNLITGLAAGAKTY 315
Query: 120 KKSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVAD-GFKVVARSGNIVA--G 176
K S+ G N V N + ++ + HG ++D G+K + + N G
Sbjct: 316 KMSMANRGQ-NQPVLNITN-----KQAFITAQNHGYALDNTLPAGWKPLFVNVNDQTNEG 369
Query: 177 IANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGT 236
I +ESK + QFHPEV L + + + G T L + RV
Sbjct: 370 IMHESKPFFAVQFHPEVTPGPIDTEYLFDSFFSLIK-KGKATTITSVLPKPALVASRVEV 428
Query: 237 SKVLVLLSGGV 247
SKVL+L SGG+
Sbjct: 429 SKVLILGSGGL 439
>gi|21361331 carbamoyl-phosphate synthetase 1 isoform b precursor
[Homo sapiens]
Length = 1500
Score = 38.9 bits (89), Expect = 0.016
Identities = 53/191 (27%), Positives = 78/191 (40%), Gaps = 25/191 (13%)
Query: 69 FRAIIISGGP-NSVYAEDAPWFDPAIFTIGK--------PVLGICYGMQMMNKVFGGTVH 119
+ I+I+GGP N AE P I + K P+ GI G + G +
Sbjct: 256 YDGILIAGGPGNPALAE------PLIQNVRKILESDRKEPLFGISTGNLITGLAAGAKTY 309
Query: 120 KKSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVAD-GFKVVARSGNIVA--G 176
K S+ G N V N + ++ + HG ++D G+K + + N G
Sbjct: 310 KMSMANRGQ-NQPVLNITN-----KQAFITAQNHGYALDNTLPAGWKPLFVNVNDQTNEG 363
Query: 177 IANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGT 236
I +ESK + QFHPEV L + + + G T L + RV
Sbjct: 364 IMHESKPFFAVQFHPEVTPGPIDTEYLFDSFFSLIK-KGKATTITSVLPKPALVASRVEV 422
Query: 237 SKVLVLLSGGV 247
SKVL+L SGG+
Sbjct: 423 SKVLILGSGGL 433
>gi|18105007 carbamoylphosphate synthetase 2/aspartate
transcarbamylase/dihydroorotase [Homo sapiens]
Length = 2225
Score = 36.2 bits (82), Expect = 0.10
Identities = 56/245 (22%), Positives = 95/245 (38%), Gaps = 43/245 (17%)
Query: 28 VVILDAGAQYGKVIDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGPNSVYAEDAP 87
++ LD G +Y ++ R + + + + P + A+ Q + + +S GP D
Sbjct: 178 ILALDCGLKYNQI--RCLCQRGAEVTVVPWD---HALDSQEYEGLFLSNGPG-----DPA 227
Query: 88 WFDPAIFTIGK--------PVLGICYGMQMMNKVFGGTVHKKSVREDGVFNISVDNTCSL 139
+ + T+ + PV GIC G Q++ G +K G N L
Sbjct: 228 SYPSVVSTLSRVLSEPNPRPVFGICLGHQLLALAIGAKTYKMRYGNRG------HNQPCL 281
Query: 140 FRGLQKEEVVLLTHGDSV--DKVADGFKVVARSGNIVA--GIANESKKLYGAQFHPEVGL 195
G + + HG +V D + + + + N + GI + S + QFHPE
Sbjct: 282 LVGSGRCFLTSQNHGFAVETDSLPADWAPLFTNANDGSNEGIVHNSLPFFSVQFHPEHQA 341
Query: 196 TENGKVILKNFLYD-----IAGCSGTFTVQNRELECIREIKERVGT--------SKVLVL 242
+ +L + + AG G TV+ R E R + T KVL+L
Sbjct: 342 GPSDMELLFDIFLETVKEATAGNPGGQTVRERLTE--RLCPPGIPTPGSGLPPPRKVLIL 399
Query: 243 LSGGV 247
SGG+
Sbjct: 400 GSGGL 404
>gi|38026934 Rho guanine nucleotide exchange factor (GEF) 11 isoform
2 [Homo sapiens]
Length = 1562
Score = 33.5 bits (75), Expect = 0.68
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 329 MTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLI--ESASLVASGKAE 386
+T +++++I + FV A+ + L+ ++ Q + +L+ E + + E
Sbjct: 768 LTQREIDRQEVINELFVTEASHL---RTLRVLDLIFYQRMKKENLMPREELARLFPNLPE 824
Query: 387 LIKTHHNDTELIRKLREEGKVIEPLKD 413
LI+ H++ E ++KLREEG +I+ + D
Sbjct: 825 LIEIHNSWCEAMKKLREEGPIIKEISD 851
>gi|7662086 Rho guanine nucleotide exchange factor (GEF) 11 isoform
1 [Homo sapiens]
Length = 1522
Score = 33.5 bits (75), Expect = 0.68
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 5/87 (5%)
Query: 329 MTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLI--ESASLVASGKAE 386
+T +++++I + FV A+ + L+ ++ Q + +L+ E + + E
Sbjct: 728 LTQREIDRQEVINELFVTEASHL---RTLRVLDLIFYQRMKKENLMPREELARLFPNLPE 784
Query: 387 LIKTHHNDTELIRKLREEGKVIEPLKD 413
LI+ H++ E ++KLREEG +I+ + D
Sbjct: 785 LIEIHNSWCEAMKKLREEGPIIKEISD 811
>gi|4505293 MYB-related protein B [Homo sapiens]
Length = 700
Score = 33.5 bits (75), Expect = 0.68
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 8/74 (10%)
Query: 609 SQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTE 668
SQ V+ TPLH D+ PL ++ + F+T D + TP P + L+
Sbjct: 480 SQKVVVTTPLHRDKTPLHQKHA--------AFVTPDQKYSMDNTPHTPTPFKNALEKYGP 531
Query: 669 IKKIPGISRIMYDL 682
+K +P + DL
Sbjct: 532 LKPLPQTPHLEEDL 545
>gi|223555935 dynein, axonemal, heavy polypeptide 14 isoform 1 [Homo
sapiens]
Length = 4515
Score = 32.3 bits (72), Expect = 1.5
Identities = 25/102 (24%), Positives = 48/102 (47%), Gaps = 13/102 (12%)
Query: 342 DTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELI--------KTHHN 393
+TF I EM K + + T+ +E+ +LV + EL+ KT
Sbjct: 2892 ETFAHILRAREEEMQTKRDRFHMGLSTI----LEATTLVTEMQEELLILGPQVEQKTKET 2947
Query: 394 DTELIRKLREEGKVIEPLKDFHKDEVRILGRELGLPEELVSR 435
+T L+ KLR++ +V+E ++ K + I+ E+ + E+ +
Sbjct: 2948 ET-LMEKLRKDSQVVEKVQMLVKQDEEIVAEEVRIVEDYAQK 2988
>gi|21450832 spindle and KT associated 1 [Homo sapiens]
Length = 255
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 623 DPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEIKK 671
+P++K P QRS+ FIT D G+P+ + + + ++ EI K
Sbjct: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170
>gi|88014625 spindle and KT associated 1 [Homo sapiens]
Length = 255
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 623 DPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEIKK 671
+P++K P QRS+ FIT D G+P+ + + + ++ EI K
Sbjct: 122 EPVKKPPKEQRSIKEMPFITCDEFNGVPSYMKSRLTYNQINDVIKEINK 170
>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
[Homo sapiens]
Length = 1388
Score = 30.4 bits (67), Expect = 5.8
Identities = 24/89 (26%), Positives = 43/89 (48%), Gaps = 1/89 (1%)
Query: 332 SPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTH 391
S EE + + +ANE E+N K ++V L+ + I +A++ A + +L+
Sbjct: 970 SLEETNRTLTSDVANLANEK-EELNNKLKDVQEQLSRLKDEEISAAAIKAQFEKQLLTER 1028
Query: 392 HNDTELIRKLREEGKVIEPLKDFHKDEVR 420
T+ + KL E EP+K + +VR
Sbjct: 1029 TLKTQAVNKLAEIMNRKEPVKRGNDTDVR 1057
>gi|84000432 hypothetical protein LOC157769 [Homo sapiens]
Length = 838
Score = 30.4 bits (67), Expect = 5.8
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 256 LNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTLPISDE 315
LNR + ++ IA H G RK Q++ + +KL +QV +N HSF G + L I E
Sbjct: 736 LNRKVCRK--IAAH---GLCRKESLQNLLHSSRKLSLQV--LNFVHSFQEGASILDIHTE 788
>gi|21361478 septin 6 isoform B [Homo sapiens]
Length = 434
Score = 30.0 bits (66), Expect = 7.5
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 331 TSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKT 390
T P+ K + +T+ NE +GE+ K EE +R ++ + E K
Sbjct: 311 TDPDSKPFSLQETYEAKRNEFLGELQKKEEE-------MRQMFVQRVKEKEAELKEAEKE 363
Query: 391 HHNDTELIRKL-REEGKVIEPLKDFHKDEVRILGRELGLPEELVSR 435
H + ++KL ++E K +E K DEV + E L S+
Sbjct: 364 LHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQ 409
>gi|22035581 septin 6 isoform D [Homo sapiens]
Length = 429
Score = 30.0 bits (66), Expect = 7.5
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 331 TSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKT 390
T P+ K + +T+ NE +GE+ K EE +R ++ + E K
Sbjct: 311 TDPDSKPFSLQETYEAKRNEFLGELQKKEEE-------MRQMFVQRVKEKEAELKEAEKE 363
Query: 391 HHNDTELIRKL-REEGKVIEPLKDFHKDEVRILGRELGLPEELVSR 435
H + ++KL ++E K +E K DEV + E L S+
Sbjct: 364 LHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQ 409
>gi|22035579 septin 6 isoform A [Homo sapiens]
Length = 427
Score = 30.0 bits (66), Expect = 7.5
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 331 TSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKT 390
T P+ K + +T+ NE +GE+ K EE +R ++ + E K
Sbjct: 311 TDPDSKPFSLQETYEAKRNEFLGELQKKEEE-------MRQMFVQRVKEKEAELKEAEKE 363
Query: 391 HHNDTELIRKL-REEGKVIEPLKDFHKDEVRILGRELGLPEELVSR 435
H + ++KL ++E K +E K DEV + E L S+
Sbjct: 364 LHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQ 409
>gi|22035577 septin 6 isoform A [Homo sapiens]
Length = 427
Score = 30.0 bits (66), Expect = 7.5
Identities = 27/106 (25%), Positives = 45/106 (42%), Gaps = 8/106 (7%)
Query: 331 TSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKT 390
T P+ K + +T+ NE +GE+ K EE +R ++ + E K
Sbjct: 311 TDPDSKPFSLQETYEAKRNEFLGELQKKEEE-------MRQMFVQRVKEKEAELKEAEKE 363
Query: 391 HHNDTELIRKL-REEGKVIEPLKDFHKDEVRILGRELGLPEELVSR 435
H + ++KL ++E K +E K DEV + E L S+
Sbjct: 364 LHEKFDRLKKLHQDEKKKLEDKKKSLDDEVNAFKQRKTAAELLQSQ 409
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 30.0 bits (66), Expect = 7.5
Identities = 40/185 (21%), Positives = 86/185 (46%), Gaps = 18/185 (9%)
Query: 256 LNRALNQEQVIAVHIDNGFM-RKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTLPISD 314
L++AL+Q+++ +D + +KR+ +++++ +++ QV I+ ++ T + +
Sbjct: 864 LSQALSQKELEITKMDQLLLEKKRDVETLQQTIEEKDQQVTEIS-----FSMTEKMVQLN 918
Query: 315 EDR----TPRKRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLR 370
E++ K + + LN+ + EE +K V+ NEV + +E+ A +
Sbjct: 919 EEKFSLGVEIKTLKEQLNLLSRAEEAKK----EQVEEDNEVSSGLKQNYDEMSPAGQISK 974
Query: 371 PDLIESASLVASG----KAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRILGREL 426
+L L+ K +L N EL++++ + + LKD K E+ + E
Sbjct: 975 EELQHEFDLLKKENEQRKRKLQAALINRKELLQRVSRLEEELANLKDESKKEIPLSETER 1034
Query: 427 GLPEE 431
G EE
Sbjct: 1035 GEVEE 1039
>gi|45267839 mesoderm induction early response 1, family member 2
[Homo sapiens]
Length = 545
Score = 30.0 bits (66), Expect = 7.5
Identities = 44/189 (23%), Positives = 76/189 (40%), Gaps = 36/189 (19%)
Query: 251 VCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEALKKLGIQVKVINAAHSFYNGTTTL 310
V L + L++EQ+ + E + + + L V A+ F N + +
Sbjct: 112 VAPNLPDMTLDKEQIA-----KDLLSGEEEEETQSSADDLTPSVTSHEASDLFPNRSGSR 166
Query: 311 PISDEDRTPRKRISKTLNMTTSPEEKRK---IIGDTF----------------VKIANEV 351
++DEDR P S + P K K ++G F + +++
Sbjct: 167 FLADEDREPGSSASSDTEEDSLPANKCKKEIMVGPQFQADLSNLHLNRHCEKIYENEDQL 226
Query: 352 IGEMNLKPE---EVFLAQGTLR-------PDLIESASLVASGKA--ELIKTHHNDTELIR 399
+ + ++ PE E FL + R P L E ++ S +A EL+K + N E +R
Sbjct: 227 LWDPSVLPEREVEEFLYRAVKRRWHEMAGPQLPEGEAVKDSEQALYELVKCNFNVEEALR 286
Query: 400 KLREEGKVI 408
+LR KVI
Sbjct: 287 RLRFNVKVI 295
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,107,336
Number of Sequences: 37866
Number of extensions: 1253917
Number of successful extensions: 2748
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2731
Number of HSP's gapped (non-prelim): 25
length of query: 693
length of database: 18,247,518
effective HSP length: 109
effective length of query: 584
effective length of database: 14,120,124
effective search space: 8246152416
effective search space used: 8246152416
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.