Search of human proteins with 4503117

Search of human proteins with 4503117

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|4503117 cystatin B [Homo sapiens]
         (98 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4503117 cystatin B [Homo sapiens]                                  202   6e-53
gi|4885165 cystatin A [Homo sapiens]                                  107   3e-24
gi|197333703 phosphatidylinositol-specific phospholipase C, X do...    30   0.54 
gi|23397570 phosphatidylinositol-specific phospholipase C, X dom...    30   0.54 
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi...    27   2.7  
gi|4503107 cystatin C precursor [Homo sapiens]                         27   4.6  
gi|58331240 fetuin B [Homo sapiens]                                    27   4.6  
gi|187936961 transmembrane protein 129 isoform a [Homo sapiens]        26   6.0  
gi|19923909 transmembrane protein 129 isoform b [Homo sapiens]         26   6.0  
gi|5803145 ralA binding protein 1 [Homo sapiens]                       26   7.8  
gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens]                     26   7.8  
gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens]                     26   7.8  
gi|21071028 acidic nuclear phosphoprotein 32D [Homo sapiens]           26   7.8  

>gi|4503117 cystatin B [Homo sapiens]
          Length = 98

 Score =  202 bits (513), Expect = 6e-53
 Identities = 98/98 (100%), Positives = 98/98 (100%)

Query: 1  MMCGAPSATQPATAETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYFIKVHVG 60
          MMCGAPSATQPATAETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYFIKVHVG
Sbjct: 1  MMCGAPSATQPATAETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYFIKVHVG 60

Query: 61 DEDFVHLRVFQSLPHENKPLTLSNYQTNKAKHDELTYF 98
          DEDFVHLRVFQSLPHENKPLTLSNYQTNKAKHDELTYF
Sbjct: 61 DEDFVHLRVFQSLPHENKPLTLSNYQTNKAKHDELTYF 98


>gi|4885165 cystatin A [Homo sapiens]
          Length = 98

 Score =  107 bits (266), Expect = 3e-24
 Identities = 52/98 (53%), Positives = 70/98 (71%)

Query: 1  MMCGAPSATQPATAETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYFIKVHVG 60
          M+ G  S  +PAT E Q I D+V+ QLEEK N+ +   +AV +K+QVVAGTNY+IKV  G
Sbjct: 1  MIPGGLSEAKPATPEIQEIVDKVKPQLEEKTNETYGKLEAVQYKTQVVAGTNYYIKVRAG 60

Query: 61 DEDFVHLRVFQSLPHENKPLTLSNYQTNKAKHDELTYF 98
          D  ++HL+VF+SLP +N+ L L+ YQ +K K DELT F
Sbjct: 61 DNKYMHLKVFKSLPGQNEDLVLTGYQVDKNKDDELTGF 98


>gi|197333703 phosphatidylinositol-specific phospholipase C, X
           domain containing 2 isoform a [Homo sapiens]
          Length = 341

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 7/59 (11%)

Query: 15  ETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYF---IKVHVGDED----FVH 66
           +TQ I    R  L +K  KK+ V + ++F+ Q+ AG  YF   +    GD D    F+H
Sbjct: 74  QTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSKPGDADQEIYFIH 132


>gi|23397570 phosphatidylinositol-specific phospholipase C, X domain
           containing 2 isoform b [Homo sapiens]
          Length = 304

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 20/59 (33%), Positives = 30/59 (50%), Gaps = 7/59 (11%)

Query: 15  ETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTNYF---IKVHVGDED----FVH 66
           +TQ I    R  L +K  KK+ V + ++F+ Q+ AG  YF   +    GD D    F+H
Sbjct: 74  QTQAIKRLARISLVKKLMKKWSVTQNLTFREQLEAGIRYFDLRVSSKPGDADQEIYFIH 132


>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
           sapiens]
          Length = 1341

 Score = 27.3 bits (59), Expect = 2.7
 Identities = 14/30 (46%), Positives = 22/30 (73%), Gaps = 4/30 (13%)

Query: 6   PSATQPATAETQ--HI--ADQVRSQLEEKE 31
           P+ATQP T+ETQ  H+  ++++   +EEKE
Sbjct: 741 PAATQPQTSETQTSHLPESERIHHTVEEKE 770


>gi|4503107 cystatin C precursor [Homo sapiens]
          Length = 146

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)

Query: 39 KAVSFKSQVVAGTNYFIKVHVG 60
          + V  + Q+VAG NYF+ V +G
Sbjct: 74 QVVRARKQIVAGVNYFLDVELG 95


>gi|58331240 fetuin B [Homo sapiens]
          Length = 382

 Score = 26.6 bits (57), Expect = 4.6
 Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 4/60 (6%)

Query: 1   MMCGAPSATQPATAETQHIADQVRSQL----EEKENKKFPVFKAVSFKSQVVAGTNYFIK 56
           M C    ++ P  +    + +     L     E  +K++ +FK     SQ V G +YF++
Sbjct: 149 MTCPDCPSSIPTDSSNHQVLEAATESLAKYNNENTSKQYSLFKVTRASSQWVVGPSYFVE 208


>gi|187936961 transmembrane protein 129 isoform a [Homo sapiens]
          Length = 362

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 17  QHIADQVRSQLE--EKENKKFPVFKAVSFKSQVVAGTNYFIKVHVGDEDFVHLRVFQSLP 74
           Q +A  V ++    +K     P  + +   + V+  T Y  +VHV  +  VHL V +S  
Sbjct: 139 QAVASSVNTEFRRIDKFATGAPGARVIVTDTWVMKVTTY--RVHVAQQQDVHLTVTESRQ 196

Query: 75  HENKP 79
           HE  P
Sbjct: 197 HELSP 201


>gi|19923909 transmembrane protein 129 isoform b [Homo sapiens]
          Length = 232

 Score = 26.2 bits (56), Expect = 6.0
 Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)

Query: 17  QHIADQVRSQLE--EKENKKFPVFKAVSFKSQVVAGTNYFIKVHVGDEDFVHLRVFQSLP 74
           Q +A  V ++    +K     P  + +   + V+  T Y  +VHV  +  VHL V +S  
Sbjct: 139 QAVASSVNTEFRRIDKFATGAPGARVIVTDTWVMKVTTY--RVHVAQQQDVHLTVTESRQ 196

Query: 75  HENKP 79
           HE  P
Sbjct: 197 HELSP 201


>gi|5803145 ralA binding protein 1 [Homo sapiens]
          Length = 655

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 21/83 (25%), Positives = 38/83 (45%), Gaps = 2/83 (2%)

Query: 14  AETQHIADQVRSQLEEKENKKFPVFKAVSFKSQVVAGTN-YFIKVHVGDEDFVHLRVF-Q 71
           A  Q +  Q+ S+ EE E  +  + +  S +    + T  Y  +     ED   L++  +
Sbjct: 498 AMEQFLRRQIASEKEEIERLRAEIAEIQSRQQHGRSETEEYSSESESESEDEEELQIILE 557

Query: 72  SLPHENKPLTLSNYQTNKAKHDE 94
            L  +N+ L + N   N+A H+E
Sbjct: 558 DLQRQNEELEIKNNHLNQAIHEE 580


>gi|57242757 calsyntenin 1 isoform 1 [Homo sapiens]
          Length = 981

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 32  NKKFPVFKAVSFKSQVVAGTNY--FIKVHVGDED 63
           N+  PVFK  S+K+ V+ G  Y   ++V   D D
Sbjct: 158 NEYAPVFKEKSYKATVIEGKQYDSILRVEAVDAD 191


>gi|57242755 calsyntenin 1 isoform 2 [Homo sapiens]
          Length = 971

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)

Query: 32  NKKFPVFKAVSFKSQVVAGTNY--FIKVHVGDED 63
           N+  PVFK  S+K+ V+ G  Y   ++V   D D
Sbjct: 148 NEYAPVFKEKSYKATVIEGKQYDSILRVEAVDAD 181


>gi|21071028 acidic nuclear phosphoprotein 32D [Homo sapiens]
          Length = 131

 Score = 25.8 bits (55), Expect = 7.8
 Identities = 12/33 (36%), Positives = 19/33 (57%)

Query: 64 FVHLRVFQSLPHENKPLTLSNYQTNKAKHDELT 96
          ++HL +    P + K L L N Q+N+ K + LT
Sbjct: 6  WIHLELRNRTPSDVKELFLDNSQSNEGKLEGLT 38


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.129    0.370 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,639,713
Number of Sequences: 37866
Number of extensions: 127126
Number of successful extensions: 341
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 334
Number of HSP's gapped (non-prelim): 13
length of query: 98
length of database: 18,247,518
effective HSP length: 69
effective length of query: 29
effective length of database: 15,634,764
effective search space: 453408156
effective search space used: 453408156
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.