Guide to the Human Genome
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Search of human proteins with 41327773

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
         (1031 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi...  2021   0.0  
gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]            399   e-110
gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]            399   e-110
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi...   390   e-108
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]         363   e-100
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]          363   e-100
gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]    360   5e-99
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap...   342   1e-93
gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo sapi...   311   2e-84
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...   293   4e-79
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...   289   1e-77
gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...   289   1e-77
gi|21071032 DEAD-box protein abstrakt [Homo sapiens]                  277   4e-74
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...   271   3e-72
gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1 [...   271   3e-72
gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2 ...   271   3e-72
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap...   268   3e-71
gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2 ...   235   1e-61
gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1...   235   1e-61
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...   230   5e-60
gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapi...   218   3e-56
gi|38569505 ATP-dependent RNA helicase ROK1 isoform a [Homo sapi...   217   4e-56
gi|38569503 ATP-dependent RNA helicase ROK1 isoform b [Homo sapi...   216   1e-55
gi|7661920 eukaryotic translation initiation factor 4A, isoform ...   214   3e-55
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap...   210   6e-54
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi...   205   2e-52
gi|4503529 eukaryotic translation initiation factor 4A isoform 1...   203   6e-52
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s...   201   2e-51
gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo sapi...   198   2e-50
gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...   195   2e-49

>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens]
          Length = 1031

 Score = 2021 bits (5237), Expect = 0.0
 Identities = 1031/1031 (100%), Positives = 1031/1031 (100%)

Query: 1    MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS 60
            MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS
Sbjct: 1    MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRS 60

Query: 61   RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS 120
            RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS
Sbjct: 61   RSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS 120

Query: 121  KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME 180
            KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME
Sbjct: 121  KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAME 180

Query: 181  NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK 240
            NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK
Sbjct: 181  NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVK 240

Query: 241  KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE 300
            KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE
Sbjct: 241  KFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEE 300

Query: 301  VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI 360
            VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI
Sbjct: 301  VDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGI 360

Query: 361  TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS 420
            TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS
Sbjct: 361  TVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGS 420

Query: 421  GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY 480
            GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY
Sbjct: 421  GKTIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVY 480

Query: 481  GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE 540
            GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE
Sbjct: 481  GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE 540

Query: 541  PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI 600
            PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI
Sbjct: 541  PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI 600

Query: 601  EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS 660
            EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS
Sbjct: 601  EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDS 660

Query: 661  IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY 720
            IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY
Sbjct: 661  IINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAY 720

Query: 721  TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF 780
            TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF
Sbjct: 721  TFITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKF 780

Query: 781  DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA 840
            DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA
Sbjct: 781  DETEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPA 840

Query: 841  PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL 900
            PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL
Sbjct: 841  PTAGNAEKLEIAKRLALRINAQKNLGIESQDVMQQATNAILRGGTILAPTVSAKTIAEQL 900

Query: 901  AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE 960
            AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE
Sbjct: 901  AEKINAKLNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISE 960

Query: 961  YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY 1020
            YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY
Sbjct: 961  YSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSY 1020

Query: 1021 QPTNKGRYKVL 1031
            QPTNKGRYKVL
Sbjct: 1021 QPTNKGRYKVL 1031


>gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  399 bits (1024), Expect = e-110
 Identities = 235/603 (38%), Positives = 347/603 (57%), Gaps = 42/603 (6%)

Query: 201 EDDDDDEDD------PAEAEKEGNEMEGEELD------PLDAYMEEVKEEVKKFNMRSVK 248
           ED+++D  +      PAE      +   + +D      PL+A+M EV+++  +   R  +
Sbjct: 77  EDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFMAEVEDQAARDMKRLEE 136

Query: 249 GGGGNEKKSGPTVTKVVTVVTTKKAV---VDSDKKKGELMENDQDAMEYSSEEEEVDLQT 305
                E+K+   +   +     ++A    +  +   G + E ++D +EY S+   +    
Sbjct: 137 KD--KERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPI---- 190

Query: 306 ALTGYQTKQRKLLEP---VDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITV 362
                    +K+++P   +DH +I+Y PF KNFY E  E+  ++ +++   R ++  + V
Sbjct: 191 ------APTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN-LRV 243

Query: 363 KGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGK 422
            G   P+P  S+   G   ++++ ++K  Y +PTPIQ Q +P  +SGRD+IGIAKTGSGK
Sbjct: 244 SGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGK 303

Query: 423 TIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGG 482
           T AF+ PM  HIMDQ+ LE G+GPIAVI+ PTREL  QI  ECK+F K   LR V VYGG
Sbjct: 304 TAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363

Query: 483 TGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQ 542
             + EQ   L+ GAEI+VCTPGR+ID +     + TNL+RV+Y+V DEADRMFDMGFE Q
Sbjct: 364 GSMWEQAKALQEGAEIVVCTPGRLIDHV---KKKATNLQRVSYLVFDEADRMFDMGFEYQ 420

Query: 543 VMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEE 602
           V  I  +VRPDRQT++FSATF + +E LAR IL  PI V  G       DV Q V ++  
Sbjct: 421 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS 480

Query: 603 -EKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI 661
              K+  L   L  +  SGSV++FV K+ +A+ L  +L +  +    LHG +DQ +R+ +
Sbjct: 481 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV 540

Query: 662 INDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYT 721
           I+DFK     +LVAT VAARGLD+  +  V+NY      + + HR GRTGRAG KG AYT
Sbjct: 541 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT 600

Query: 722 FITEDQARYAGDIIKALELSGTAVPPDL-----EKLWSDFKDQQKAEGKIIKKSSGFSGK 776
            +T   + +AGD+++ LE +   V  +L     +  W  F+  +   GK  K + G  G 
Sbjct: 601 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAW--FRKSRFKGGKGKKLNIGGGGL 658

Query: 777 GFK 779
           G++
Sbjct: 659 GYR 661



 Score = 31.6 bits (70), Expect = 4.0
 Identities = 33/138 (23%), Positives = 46/138 (33%), Gaps = 10/138 (7%)

Query: 12  SASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRS 71
           S +  R G+   +         RG  R S     +R  +  R  D  R     R     S
Sbjct: 792 SGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRHGDGYRHPESSS 851

Query: 72  RSRERDRSRERRRSRSRDRR-RSRSRSRGRRSRSSSPG-NKSKKTENRSRSKEKTDGGES 129
           R  +  R  E R   S  R   +R  + GR   S     N+  K E +   K  +     
Sbjct: 852 RHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKMEPKVDS----- 906

Query: 130 SKEKKKDKDDKEDEKEKD 147
               K DK D + +K  D
Sbjct: 907 ---SKMDKVDSKTDKTAD 921


>gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  399 bits (1024), Expect = e-110
 Identities = 235/603 (38%), Positives = 347/603 (57%), Gaps = 42/603 (6%)

Query: 201 EDDDDDEDD------PAEAEKEGNEMEGEELD------PLDAYMEEVKEEVKKFNMRSVK 248
           ED+++D  +      PAE      +   + +D      PL+A+M EV+++  +   R  +
Sbjct: 77  EDEEEDSSNVDLPYIPAENSPTRQQFHSKPVDSDSDDDPLEAFMAEVEDQAARDMKRLEE 136

Query: 249 GGGGNEKKSGPTVTKVVTVVTTKKAV---VDSDKKKGELMENDQDAMEYSSEEEEVDLQT 305
                E+K+   +   +     ++A    +  +   G + E ++D +EY S+   +    
Sbjct: 137 KD--KERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPI---- 190

Query: 306 ALTGYQTKQRKLLEP---VDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITV 362
                    +K+++P   +DH +I+Y PF KNFY E  E+  ++ +++   R ++  + V
Sbjct: 191 ------APTKKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLN-LRV 243

Query: 363 KGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGK 422
            G   P+P  S+   G   ++++ ++K  Y +PTPIQ Q +P  +SGRD+IGIAKTGSGK
Sbjct: 244 SGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGK 303

Query: 423 TIAFLLPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGG 482
           T AF+ PM  HIMDQ+ LE G+GPIAVI+ PTREL  QI  ECK+F K   LR V VYGG
Sbjct: 304 TAAFIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363

Query: 483 TGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQ 542
             + EQ   L+ GAEI+VCTPGR+ID +     + TNL+RV+Y+V DEADRMFDMGFE Q
Sbjct: 364 GSMWEQAKALQEGAEIVVCTPGRLIDHV---KKKATNLQRVSYLVFDEADRMFDMGFEYQ 420

Query: 543 VMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEE 602
           V  I  +VRPDRQT++FSATF + +E LAR IL  PI V  G       DV Q V ++  
Sbjct: 421 VRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEILHS 480

Query: 603 -EKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSI 661
              K+  L   L  +  SGSV++FV K+ +A+ L  +L +  +    LHG +DQ +R+ +
Sbjct: 481 GPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKV 540

Query: 662 INDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYT 721
           I+DFK     +LVAT VAARGLD+  +  V+NY      + + HR GRTGRAG KG AYT
Sbjct: 541 ISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVAYT 600

Query: 722 FITEDQARYAGDIIKALELSGTAVPPDL-----EKLWSDFKDQQKAEGKIIKKSSGFSGK 776
            +T   + +AGD+++ LE +   V  +L     +  W  F+  +   GK  K + G  G 
Sbjct: 601 LLTPKDSNFAGDLVRNLEGANQHVSKELLDLAMQNAW--FRKSRFKGGKGKKLNIGGGGL 658

Query: 777 GFK 779
           G++
Sbjct: 659 GYR 661



 Score = 31.6 bits (70), Expect = 4.0
 Identities = 33/138 (23%), Positives = 46/138 (33%), Gaps = 10/138 (7%)

Query: 12  SASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRS 71
           S +  R G+   +         RG  R S     +R  +  R  D  R     R     S
Sbjct: 792 SGNNSREGTGGSNGKRERYTENRGSSRHSHGETGNRHSDSPRHGDGGRHGDGYRHPESSS 851

Query: 72  RSRERDRSRERRRSRSRDRR-RSRSRSRGRRSRSSSPG-NKSKKTENRSRSKEKTDGGES 129
           R  +  R  E R   S  R   +R  + GR   S     N+  K E +   K  +     
Sbjct: 852 RHTDGHRHGENRHGGSAGRHGENRGANDGRNGESRKEAFNRESKMEPKMEPKVDS----- 906

Query: 130 SKEKKKDKDDKEDEKEKD 147
               K DK D + +K  D
Sbjct: 907 ---SKMDKVDSKTDKTAD 921


>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
           sapiens]
          Length = 820

 Score =  390 bits (1002), Expect = e-108
 Identities = 282/826 (34%), Positives = 415/826 (50%), Gaps = 100/826 (12%)

Query: 21  RSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRL-RRSRSRERDRS 79
           + R  SPS +  KR      R RDRDR R+ S S+D++R RSRDR+R   RSRSR R +S
Sbjct: 9   KDRDASPSKEERKRSRTP-DRERDRDRDRKSSPSKDRKRHRSRDRRRGGSRSRSRSRSKS 67

Query: 80  RERRR---SRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKD 136
            ER R    R RD+ R R++    R +     +K +K  + S  + K       ++ KKD
Sbjct: 68  AERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRKDRDSKKD 127

Query: 137 KDDKEDEKEKDAGNFD------QNKLEEEMRKRKERVEKWREEQR--KKAMENIGELKKE 188
           ++D+  +K+  A          + K EEE   + + + K   E    K+  + + E ++ 
Sbjct: 128 EEDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRM 187

Query: 189 IEEMKQGKKWSLEDDDDDEDDPAEAEKEGN------EMEGEELDPLDAYMEEVKEEVKKF 242
           +EE ++ +K   +      +DP E E+         E  G E +     + E K++ K+ 
Sbjct: 188 LEEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEKDKSKEL 247

Query: 243 NMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVD 302
           +    +  GG +K+      +    +  +K V + D  +    +   D      E  +V 
Sbjct: 248 HAIKERYLGGIKKR------RRTRHLNDRKFVFEWDASE----DTSIDYNPLYKERHQVQ 297

Query: 303 L-----------------QTALTGYQTKQRKLLEPVDHGKIEYEPFRK--------NFYV 337
           L                 Q+   G   ++R+ LE  +  +      RK        + + 
Sbjct: 298 LLGRGFIAGIDLKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHW 357

Query: 338 EVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTP 397
              +L +M+  +  +FR E   IT KG   P PI+SW    +   IL  + K GY++PTP
Sbjct: 358 SQKKLDEMTDRDWRIFR-EDYSITTKGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTP 416

Query: 398 IQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMD----QRSLEEGEGPIAVIMTP 453
           IQ QAIP  +  RD+IG+A+TGSGKT AFL+P+   I       R  E  +GP A+I+ P
Sbjct: 417 IQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAP 476

Query: 454 TRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAAN 513
           TRELA QI +E  KF K LG+R V V GG    +Q   L+ G EI++ TPGR+ID+L   
Sbjct: 477 TRELAQQIEEETIKFGKPLGIRTVAVIGGISREDQGFRLRMGCEIVIATPGRLIDVL--- 533

Query: 514 SGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRI-----VDNVRPD--------------- 553
             R   L R TYVVLDEADRM DMGFEP V +I     V N +PD               
Sbjct: 534 ENRYLVLSRCTYVVLDEADRMIDMGFEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFE 593

Query: 554 ------RQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFL 607
                 RQTVMF+AT P A+E LAR  L +P  V +G        VEQ+V ++ E +K  
Sbjct: 594 SGKHKYRQTVMFTATMPPAVERLARSYLRRPAVVYIGSAGKPHERVEQKVFLMSESEKRK 653

Query: 608 KLLELLGHYQESG---SVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIIND 664
           KLL +L    E G    +IIFV++++  D L K L +  Y   +LHGG  Q  R+  +++
Sbjct: 654 KLLAIL----EQGFDPPIIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSN 709

Query: 665 FKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFIT 724
            K G   +LVAT VA RG+D++ + +VVNY    + EDY+HR GRTGRAG  G A TF+T
Sbjct: 710 LKAGAKDILVATDVAGRGIDIQDVSMVVNYDMAKNIEDYIHRIGRTGRAGKSGVAITFLT 769

Query: 725 EDQARYAGDIIKA-LELSGTAVPPDLEKLWSDFKDQQKAEGKIIKK 769
           ++ +    ++ +A LE   ++ PP+L    ++  D Q   G I+ K
Sbjct: 770 KEDSAVFYELKQAILESPVSSCPPEL----ANHPDAQHKPGTILTK 811



 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 61/278 (21%), Positives = 120/278 (43%), Gaps = 74/278 (26%)

Query: 50  ERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGN 109
           E +  +D+  S S++ ++  R+  RERDR R+R+ S S+DR+R RSR R R       G+
Sbjct: 4   ELADKKDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRG------GS 57

Query: 110 KSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEK 169
           +S+   +RSRSK        S E+++   ++E +KE+D    D+++ ++  R+ K+R   
Sbjct: 58  RSR---SRSRSK--------SAERERRHKERERDKERDRNKKDRDRDKDGHRRDKDRKRS 106

Query: 170 WREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLD 229
                R K  ++    +K+ +  K           D+ED+  + + +   +  EEL    
Sbjct: 107 SLSPGRGKDFKS----RKDRDSKK-----------DEEDEHGDKKPKAQPLSLEEL---- 147

Query: 230 AYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQ 289
                                                 +  KKA  +++ K   L + ++
Sbjct: 148 --------------------------------------LAKKKAEEEAEAKPKFLSKAER 169

Query: 290 DAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIE 327
           +A      ++EV+ +  +   + K+RK  + +    +E
Sbjct: 170 EAEALKRRQQEVEERQRMLEEERKKRKQFQDLGRKMLE 207



 Score = 33.9 bits (76), Expect = 0.81
 Identities = 44/244 (18%), Positives = 89/244 (36%), Gaps = 44/244 (18%)

Query: 4   ESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSR 63
           E  H  K+  ++  S     ++  +++ ++      S++       +R +   + R R  
Sbjct: 129 EDEHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRML 188

Query: 64  DRKRLRRSRSRERDRS-----RERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRS 118
           + +R +R + ++  R      +ER R   R+R    +              +  K++   
Sbjct: 189 EEERKKRKQFQDLGRKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEKDKSKELH 248

Query: 119 RSKEKTDGGESSKEKKKDKDDKEDEKEKDAG---NFDQNKLEEE---------------- 159
             KE+  GG   + + +  +D++   E DA    + D N L +E                
Sbjct: 249 AIKERYLGGIKKRRRTRHLNDRKFVFEWDASEDTSIDYNPLYKERHQVQLLGRGFIAGID 308

Query: 160 ---------------MRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDD 204
                          M KR+   EK +EE R + +      KKE ++    + WS +  D
Sbjct: 309 LKQQKREQSRFYGDLMEKRRTLEEKEQEEARLRKLR-----KKEAKQRWDDRHWSQKKLD 363

Query: 205 DDED 208
           +  D
Sbjct: 364 EMTD 367


>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
          Length = 731

 Score =  363 bits (932), Expect = e-100
 Identities = 194/430 (45%), Positives = 275/430 (63%), Gaps = 8/430 (1%)

Query: 327 EYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKG-CPKPIKSWVQCGISMKILN 385
           E   F KNFYVE PE+A+++  EV+  R + E ITV+G   CPKP+ ++        +++
Sbjct: 126 ELPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMD 184

Query: 386 SLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG 445
            L    + +PTPIQ Q  P  +SGRD++GIA+TGSGKT+A+LLP   HI  Q  LE G+G
Sbjct: 185 VLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG 244

Query: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
           PI +++ PTRELA Q+ +    + K   L+  C+YGG     QI +L+RG EI + TPGR
Sbjct: 245 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 304

Query: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPR 565
           +ID L   SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +IVD +RPDRQT+M+SAT+P+
Sbjct: 305 LIDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK 361

Query: 566 AMEALARRILSKPIEVQVGGRSVVCS-DVEQQVIVIEEEKKFLKLLELLGHY--QESGSV 622
            +  LA   L    ++ VG   +  + ++ Q V V  E +K  KL++L+     ++    
Sbjct: 362 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKT 421

Query: 623 IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARG 682
           IIFV+ +   D L + + R  +P M +HG   Q +RD ++N+F++G   +L+AT VA+RG
Sbjct: 422 IIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRG 481

Query: 683 LDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSG 742
           LDV+ +  V+NY  PN  EDYVHR GRT R+ NKG AYTF T    + A ++IK LE + 
Sbjct: 482 LDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEAN 541

Query: 743 TAVPPDLEKL 752
            A+ P L +L
Sbjct: 542 QAINPKLMQL 551


>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
          Length = 729

 Score =  363 bits (932), Expect = e-100
 Identities = 194/430 (45%), Positives = 275/430 (63%), Gaps = 8/430 (1%)

Query: 327 EYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKG-CPKPIKSWVQCGISMKILN 385
           E   F KNFYVE PE+A+++  EV+  R + E ITV+G   CPKP+ ++        +++
Sbjct: 126 ELPKFEKNFYVEHPEVARLTPYEVDELRRKKE-ITVRGGDVCPKPVFAFHHANFPQYVMD 184

Query: 386 SLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEG 445
            L    + +PTPIQ Q  P  +SGRD++GIA+TGSGKT+A+LLP   HI  Q  LE G+G
Sbjct: 185 VLMDQHFTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDG 244

Query: 446 PIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGR 505
           PI +++ PTRELA Q+ +    + K   L+  C+YGG     QI +L+RG EI + TPGR
Sbjct: 245 PICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPKGPQIRDLERGVEICIATPGR 304

Query: 506 MIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPR 565
           +ID L   SG+ TNLRR TY+VLDEADRM DMGFEPQ+ +IVD +RPDRQT+M+SAT+P+
Sbjct: 305 LIDFL--ESGK-TNLRRCTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPK 361

Query: 566 AMEALARRILSKPIEVQVGGRSVVCS-DVEQQVIVIEEEKKFLKLLELLGHY--QESGSV 622
            +  LA   L    ++ VG   +  + ++ Q V V  E +K  KL++L+     ++    
Sbjct: 362 EVRQLAEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKT 421

Query: 623 IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARG 682
           IIFV+ +   D L + + R  +P M +HG   Q +RD ++N+F++G   +L+AT VA+RG
Sbjct: 422 IIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRG 481

Query: 683 LDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSG 742
           LDV+ +  V+NY  PN  EDYVHR GRT R+ NKG AYTF T    + A ++IK LE + 
Sbjct: 482 LDVEDVKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGNLKQARELIKVLEEAN 541

Query: 743 TAVPPDLEKL 752
            A+ P L +L
Sbjct: 542 QAINPKLMQL 551


>gi|4758138 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Homo sapiens]
          Length = 614

 Score =  360 bits (923), Expect = 5e-99
 Identities = 179/433 (41%), Positives = 270/433 (62%), Gaps = 9/433 (2%)

Query: 327 EYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNS 386
           E   F KNFY E P+LA+ + +EV  +R   E ITV+G  CPKP+ ++ +      +++ 
Sbjct: 50  ELPKFEKNFYQEHPDLARRTAQEVETYRRSKE-ITVRGHNCPKPVLNFYEANFPANVMDV 108

Query: 387 LKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEEGEGP 446
           + +  + +PT IQ Q  P  +SG D++G+A+TGSGKT+++LLP   HI  Q  LE G+GP
Sbjct: 109 IARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGP 168

Query: 447 IAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRM 506
           I +++ PTRELA Q+ +   ++ +   L+  C+YGG     QI +L+RG EI + TPGR+
Sbjct: 169 ICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRL 228

Query: 507 IDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRA 566
           ID L       TNLRR TY+VLDEADRM DMGFEPQ+ +IVD +RPDRQT+M+SAT+P+ 
Sbjct: 229 IDFLECGK---TNLRRTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKE 285

Query: 567 MEALARRILSKPIEVQVGGRSVVCSDVEQQVI----VIEEEKKFLKLLELLGHYQESGSV 622
           +  LA   L   I + +G   +  +    Q++     +E+++K ++L+E +   +E+   
Sbjct: 286 VRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKEN-KT 344

Query: 623 IIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARG 682
           I+FV+ +   D L + + R  +P M +HG   Q +RD ++N+FK+G   +L+AT VA+RG
Sbjct: 345 IVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRG 404

Query: 683 LDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSG 742
           LDV+ +  V+NY  PN  EDY+HR GRT R+   G AYTF T +  +   D+I  L  + 
Sbjct: 405 LDVEDVKFVINYDYPNSSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREAN 464

Query: 743 TAVPPDLEKLWSD 755
            A+ P L +L  D
Sbjct: 465 QAINPKLLQLVED 477


>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
           sapiens]
          Length = 648

 Score =  342 bits (877), Expect = 1e-93
 Identities = 194/446 (43%), Positives = 283/446 (63%), Gaps = 18/446 (4%)

Query: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITV------KGKGCPKPIKSW---VQCGIS 380
           P +KNFY E    + MS+ E + +R E   IT       + +  P P  ++    QC   
Sbjct: 193 PIKKNFYKESTATSAMSKVEADSWRKENFNITWDDLKDGEKRPIPNPTCTFDDAFQC--Y 250

Query: 381 MKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
            +++ ++KK G++KPTPIQ+QA P ++ G DLIG+A+TG+GKT+ +L+P F H++ Q SL
Sbjct: 251 PEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVLQPSL 310

Query: 441 E-EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEII 499
           + +   P  +++TPTRELALQ+  EC K+S   GLR VCVYGG    EQI ELK+G +II
Sbjct: 311 KGQRNRPGMLVLTPTRELALQVEGECCKYSYK-GLRSVCVYGGGNRDEQIEELKKGVDII 369

Query: 500 VCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMF 559
           + TPGR+ D+  +N     NL+ +TY+VLDEAD+M DMGFEPQ+M+I+ +VRPDRQTVM 
Sbjct: 370 IATPGRLNDLQMSN---FVNLKNITYLVLDEADKMLDMGFEPQIMKILLDVRPDRQTVMT 426

Query: 560 SATFPRAMEALARRILSKPIEVQVGGRSVVC-SDVEQQVIVIEEEKKFLKLLELLGHYQE 618
           SAT+P ++  LA+  L +P+ V VG   +V  S V+Q +IV  EE+K+  +   L     
Sbjct: 427 SATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTFLQSMSS 486

Query: 619 SGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSV 678
           +  VI+FV ++  AD L  DL+  +    SLHG  +Q DR+  + +FK G  ++L+AT +
Sbjct: 487 TDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDL 546

Query: 679 AARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKAL 738
           A+RGLDV  +  V N+  P + E+YVHR GRTGRAG  G + T +T +  R A ++I  L
Sbjct: 547 ASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLTRNDWRVASELINIL 606

Query: 739 ELSGTAVPPDLEKLWSDFK-DQQKAE 763
           E +  ++P +L  +   FK  QQK E
Sbjct: 607 ERANQSIPEELVSMAERFKAHQQKRE 632


>gi|55749865 DEAD (Asp-Glu-Ala-Asp) box polypeptide 53 [Homo
           sapiens]
          Length = 631

 Score =  311 bits (797), Expect = 2e-84
 Identities = 182/461 (39%), Positives = 272/461 (59%), Gaps = 14/461 (3%)

Query: 330 PFRKNFYVEVPELAKMSQEEVNVFRLEMEGITV------KGKGCPKPIKSWVQCGISMK- 382
           P +KNFY+E    + MS+ +V  +R E   IT       + +  PKP   +         
Sbjct: 173 PVKKNFYIESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPD 232

Query: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR-SLE 441
           +L S+ + G  KPTPIQ+QA P I+ G DLI +A+TG+GKT+++L+P F H+  Q  S E
Sbjct: 233 LLKSIIRVGIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISRE 292

Query: 442 EGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVC 501
           +  GP  +++TPTRELAL +  EC K+S   GL+ +C+YGG   + QI ++ +G +II+ 
Sbjct: 293 QRNGPGMLVLTPTRELALHVEAECSKYSYK-GLKSICIYGGRNRNGQIEDISKGVDIIIA 351

Query: 502 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSA 561
           TPGR+ D+   NS    NLR +TY+V+DEAD+M DM FEPQ+ +I+ +VRPDRQTVM SA
Sbjct: 352 TPGRLNDLQMNNS---VNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSA 408

Query: 562 TFPRAMEALARRILSKPIEVQVGGRSVVC-SDVEQQVIVIEEEKKFLKLLELLGHYQESG 620
           T+P  +  LA   L  P+ V VG  ++V  + V+Q +IV  E++K     E + +   + 
Sbjct: 409 TWPDTVRQLALSYLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPND 468

Query: 621 SVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAA 680
            VI+FV ++  AD L  D         SLHG  +Q D++  + DFK+G  K+L+ T + +
Sbjct: 469 KVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVS 528

Query: 681 RGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALEL 740
           RGLD+  +  V NY  P + + YVHR G  GR G  G + T IT+  ++ AG++IK L+ 
Sbjct: 529 RGLDLNDVTHVYNYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDR 588

Query: 741 SGTAVPPDLEKLWSDFK-DQQKAEGKIIKKSSGFSGKGFKF 780
           +  +VP DL  +   +K +QQK   +   +  G   K F F
Sbjct: 589 ANQSVPEDLVVMAEQYKLNQQKRHRETRSRKPGQRRKEFYF 629


>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
           sapiens]
          Length = 662

 Score =  293 bits (751), Expect = 4e-79
 Identities = 173/458 (37%), Positives = 259/458 (56%), Gaps = 22/458 (4%)

Query: 341 ELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
           EL       +N  + +   +   G  CP  I+S+    +   I+ +++   Y +PTP+Q 
Sbjct: 149 ELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIMGNIELTRYTRPTPVQK 208

Query: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ------RSLEEG-------EGPI 447
            AIP I   RDL+  A+TGSGKT AFLLP+   I         R+++E        + PI
Sbjct: 209 HAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALRAMKENGRYGRRKQYPI 268

Query: 448 AVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMI 507
           ++++ PTRELA+QI +E +KFS    +R   VYGG  I +QI +L+RG  ++V TPGR++
Sbjct: 269 SLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLV 328

Query: 508 DMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV--DNVRPD--RQTVMFSATF 563
           DM+    G++  L    Y+VLDEADRM DMGFEPQ+ RIV  D + P   R T+MFSATF
Sbjct: 329 DMM--ERGKI-GLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 385

Query: 564 PRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVI 623
           P+ ++ LAR  L + I + VG       ++ Q+V+ +EE  K   LL+LL    +    +
Sbjct: 386 PKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEESDKRSFLLDLLNATGKDSLTL 445

Query: 624 IFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
           +FV+ ++ AD L   L    Y C S+HG   Q DR+  ++ F++G   +LVAT+VAARGL
Sbjct: 446 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 505

Query: 684 DVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGT 743
           D+ ++  V+N+  P+  E+YVHR GRTGR GN G A +F  E       D++  L  +  
Sbjct: 506 DISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERNINITKDLLDLLVEAKQ 565

Query: 744 AVPPDLEKLWSD--FKDQQKAEGKIIKKSSGFSGKGFK 779
            VP  LE +  +  +K   +   K  + S GF  + ++
Sbjct: 566 EVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGARDYR 603


>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
           [Homo sapiens]
          Length = 660

 Score =  289 bits (739), Expect = 1e-77
 Identities = 170/458 (37%), Positives = 259/458 (56%), Gaps = 22/458 (4%)

Query: 341 ELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
           EL       +N  + +   +   G  CP  I+++    +   I+ +++   Y +PTP+Q 
Sbjct: 147 ELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQK 206

Query: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ------RSLEEG-------EGPI 447
            AIP I   RDL+  A+TGSGKT AFLLP+   I         ++++E        + PI
Sbjct: 207 HAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPI 266

Query: 448 AVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMI 507
           ++++ PTRELA+QI +E +KFS    +R   VYGG  I +QI +L+RG  ++V TPGR++
Sbjct: 267 SLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLV 326

Query: 508 DMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV--DNVRPD--RQTVMFSATF 563
           DM+    G++  L    Y+VLDEADRM DMGFEPQ+ RIV  D + P   R T+MFSATF
Sbjct: 327 DMM--ERGKI-GLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 383

Query: 564 PRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVI 623
           P+ ++ LAR  L + I + VG       ++ Q+V+ +E+  K   LL++LG        +
Sbjct: 384 PKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTL 443

Query: 624 IFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
           +FV+ ++ AD L   L    Y C S+HG   Q DR+  ++ F++G   +LVAT+VAARGL
Sbjct: 444 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 503

Query: 684 DVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGT 743
           D+ ++  V+N+  P+  E+YVHR GRTGR GN G A +F  E       D++  L  +  
Sbjct: 504 DISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQ 563

Query: 744 AVPPDLEKLWSD--FKDQQKAEGKIIKKSSGFSGKGFK 779
            VP  LE +  +  +K   +   K  + S GF  + ++
Sbjct: 564 EVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYR 601


>gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
           [Homo sapiens]
          Length = 660

 Score =  289 bits (739), Expect = 1e-77
 Identities = 170/458 (37%), Positives = 259/458 (56%), Gaps = 22/458 (4%)

Query: 341 ELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQT 400
           EL       +N  + +   +   G  CP  I+++    +   I+ +++   Y +PTP+Q 
Sbjct: 147 ELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIMGNIELTRYTRPTPVQK 206

Query: 401 QAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ------RSLEEG-------EGPI 447
            AIP I   RDL+  A+TGSGKT AFLLP+   I         ++++E        + PI
Sbjct: 207 HAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALKAVKENGRYGRRKQYPI 266

Query: 448 AVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMI 507
           ++++ PTRELA+QI +E +KFS    +R   VYGG  I +QI +L+RG  ++V TPGR++
Sbjct: 267 SLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQIRDLERGCHLLVATPGRLV 326

Query: 508 DMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIV--DNVRPD--RQTVMFSATF 563
           DM+    G++  L    Y+VLDEADRM DMGFEPQ+ RIV  D + P   R T+MFSATF
Sbjct: 327 DMM--ERGKI-GLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTMPPKGVRHTMMFSATF 383

Query: 564 PRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVI 623
           P+ ++ LAR  L + I + VG       ++ Q+V+ +E+  K   LL++LG        +
Sbjct: 384 PKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVVWVEDLDKRSFLLDILGATGSDSLTL 443

Query: 624 IFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGL 683
           +FV+ ++ AD L   L    Y C S+HG   Q DR+  ++ F++G   +LVAT+VAARGL
Sbjct: 444 VFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARGL 503

Query: 684 DVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSGT 743
           D+ ++  V+N+  P+  E+YVHR GRTGR GN G A +F  E       D++  L  +  
Sbjct: 504 DISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKNMNITKDLLDLLVEAKQ 563

Query: 744 AVPPDLEKLWSD--FKDQQKAEGKIIKKSSGFSGKGFK 779
            VP  LE +  +  +K   +   K  + S GF  + ++
Sbjct: 564 EVPSWLENMAYEHHYKGGSRGRSKSNRFSGGFGARDYR 601


>gi|21071032 DEAD-box protein abstrakt [Homo sapiens]
          Length = 622

 Score =  277 bits (708), Expect = 4e-74
 Identities = 177/484 (36%), Positives = 256/484 (52%), Gaps = 27/484 (5%)

Query: 290 DAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGK-----------IEYEPFRKNFYVE 338
           D  ++  E+ E   ++A      ++ K+LE V  G+           I Y+   K  +  
Sbjct: 89  DQHQHLKEKAEARKESAKEKQLKEEEKILESVAEGRALMSVKEMAKGITYDDPIKTSWTP 148

Query: 339 VPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPI 398
              +  MS+E     R +   I V+G G P PIKS+ +      IL  LKK G   PTPI
Sbjct: 149 PRYVLSMSEERHERVRKKYH-ILVEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPI 207

Query: 399 QTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRS---LEEGEGPIAVIMTPTR 455
           Q Q IP I+SGRD+IGIA TGSGKT+ F LP+    ++Q       + EGP  +I+ P+R
Sbjct: 208 QIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSR 267

Query: 456 ELALQITKECKKFSKTLG------LRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDM 509
           ELA Q     + + + L       LR     GG  + EQ+  ++ G  ++V TPGR++D+
Sbjct: 268 ELARQTHGILEYYCRLLQEDSSPLLRCALCIGGMSVKEQMETIRHGVHMMVATPGRLMDL 327

Query: 510 LAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRAMEA 569
           L     ++ +L    Y+ LDEADRM DMGFE  +  I    +  RQT++FSAT P+ ++ 
Sbjct: 328 LQK---KMVSLDICRYLALDEADRMIDMGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQN 384

Query: 570 LARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQ 629
            A+  L KP+ + VG       DV Q+V  ++EE K + LLE L   +    V+IF +K+
Sbjct: 385 FAKSALVKPVTINVGRAGAASLDVIQEVEYVKEEAKMVYLLECL--QKTPPPVLIFAEKK 442

Query: 630 EHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLI 689
              D + + L+      +++HGG DQ +R   I  F+ G   +LVAT VA++GLD   + 
Sbjct: 443 ADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQ 502

Query: 690 LVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKALELSG-TAVPPD 748
            V+NY  P   E+YVHR GRTGR+GN G A TFI +         +KAL L     VPP 
Sbjct: 503 HVINYDMPEEIENYVHRIGRTGRSGNTGIATTFINKACDESVLMDLKALLLEAKQKVPPV 562

Query: 749 LEKL 752
           L+ L
Sbjct: 563 LQVL 566



 Score = 32.7 bits (73), Expect = 1.8
 Identities = 20/87 (22%), Positives = 45/87 (51%), Gaps = 3/87 (3%)

Query: 112 KKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNK-LEEEMRKRKERVEKW 170
           K  + R +   + +  +S  E + D+DD     + +    DQ++ L+E+   RKE  ++ 
Sbjct: 49  KLLQRRRKGAAEEEQQDSGSEPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEK 108

Query: 171 REEQRKKAMENI--GELKKEIEEMKQG 195
           + ++ +K +E++  G     ++EM +G
Sbjct: 109 QLKEEEKILESVAEGRALMSVKEMAKG 135



 Score = 31.2 bits (69), Expect = 5.3
 Identities = 24/107 (22%), Positives = 42/107 (39%)

Query: 38  RRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRS 97
           +R+R+ +      RS + D+          LR+ R     +  +RRR  + +  +  S S
Sbjct: 9   KRARTDEVPAGGSRSEAEDEDDEDYVPYVPLRQRRQLLLQKLLQRRRKGAAEEEQQDSGS 68

Query: 98  RGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEK 144
             R      P           + +   +  E+ KE  K+K  KE+EK
Sbjct: 69  EPRGDEDDIPLGPQSNVSLLDQHQHLKEKAEARKESAKEKQLKEEEK 115


>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
           [Homo sapiens]
          Length = 724

 Score =  271 bits (692), Expect = 3e-72
 Identities = 156/416 (37%), Positives = 243/416 (58%), Gaps = 14/416 (3%)

Query: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
           Q  +N  + +   + V G   P  I ++ +  +   + N++ K GY K TP+Q  +IP I
Sbjct: 263 QTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPII 322

Query: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ----RSLEEGEGPIAVIMTPTRELALQIT 462
           ++GRDL+  A+TGSGKT AFLLP+  H+M         +E + P  +I+ PTREL  QI 
Sbjct: 323 LAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIY 382

Query: 463 KECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 522
            E +KFS    +R V +YGGT +   I ++ +G  I+  TPGR++D++         L++
Sbjct: 383 LEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQ 439

Query: 523 VTYVVLDEADRMFDMGFEPQVMRIVD----NVRPDRQTVMFSATFPRAMEALARRIL-SK 577
           + Y+VLDEADRM DMGF P++ +++       +  RQT+MFSATFP  ++ LA   L S 
Sbjct: 440 IKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSN 499

Query: 578 PIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLK 637
            + V VG     C DV+Q V+ + +  K  KL+E+L +  +  +++ FV+ ++ AD +  
Sbjct: 500 YLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGDERTMV-FVETKKKADFIAT 558

Query: 638 DLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 697
            L +      S+HG  +Q +R+  + DF+ G C +LVATSVAARGLD++++  V+N+  P
Sbjct: 559 FLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLP 618

Query: 698 NHYEDYVHRAGRTGRAGNKGYAYTFI-TEDQARYAGDIIKALELSGTAVPPDLEKL 752
           +  ++YVHR GRTGR GN G A +F   E     A  ++K L  +   VP  LE++
Sbjct: 619 STIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEI 674


>gi|13518015 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 1
           [Homo sapiens]
          Length = 724

 Score =  271 bits (692), Expect = 3e-72
 Identities = 156/416 (37%), Positives = 243/416 (58%), Gaps = 14/416 (3%)

Query: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
           Q  +N  + +   + V G   P  I ++ +  +   + N++ K GY K TP+Q  +IP I
Sbjct: 263 QTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPII 322

Query: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ----RSLEEGEGPIAVIMTPTRELALQIT 462
           ++GRDL+  A+TGSGKT AFLLP+  H+M         +E + P  +I+ PTREL  QI 
Sbjct: 323 LAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIY 382

Query: 463 KECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 522
            E +KFS    +R V +YGGT +   I ++ +G  I+  TPGR++D++         L++
Sbjct: 383 LEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQ 439

Query: 523 VTYVVLDEADRMFDMGFEPQVMRIVD----NVRPDRQTVMFSATFPRAMEALARRIL-SK 577
           + Y+VLDEADRM DMGF P++ +++       +  RQT+MFSATFP  ++ LA   L S 
Sbjct: 440 IKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSN 499

Query: 578 PIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLK 637
            + V VG     C DV+Q V+ + +  K  KL+E+L +  +  +++ FV+ ++ AD +  
Sbjct: 500 YLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGDERTMV-FVETKKKADFIAT 558

Query: 638 DLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 697
            L +      S+HG  +Q +R+  + DF+ G C +LVATSVAARGLD++++  V+N+  P
Sbjct: 559 FLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLP 618

Query: 698 NHYEDYVHRAGRTGRAGNKGYAYTFI-TEDQARYAGDIIKALELSGTAVPPDLEKL 752
           +  ++YVHR GRTGR GN G A +F   E     A  ++K L  +   VP  LE++
Sbjct: 619 STIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEI 674


>gi|216548263 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 2
           [Homo sapiens]
          Length = 690

 Score =  271 bits (692), Expect = 3e-72
 Identities = 156/416 (37%), Positives = 243/416 (58%), Gaps = 14/416 (3%)

Query: 347 QEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAI 406
           Q  +N  + +   + V G   P  I ++ +  +   + N++ K GY K TP+Q  +IP I
Sbjct: 229 QTGINFDKYDTILVEVSGHDAPPAILTFEEANLCQTLNNNIAKAGYTKLTPVQKYSIPII 288

Query: 407 MSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ----RSLEEGEGPIAVIMTPTRELALQIT 462
           ++GRDL+  A+TGSGKT AFLLP+  H+M         +E + P  +I+ PTREL  QI 
Sbjct: 289 LAGRDLMACAQTGSGKTAAFLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIY 348

Query: 463 KECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRR 522
            E +KFS    +R V +YGGT +   I ++ +G  I+  TPGR++D++         L++
Sbjct: 349 LEARKFSFGTCVRAVVIYGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEK---IGLKQ 405

Query: 523 VTYVVLDEADRMFDMGFEPQVMRIVD----NVRPDRQTVMFSATFPRAMEALARRIL-SK 577
           + Y+VLDEADRM DMGF P++ +++       +  RQT+MFSATFP  ++ LA   L S 
Sbjct: 406 IKYLVLDEADRMLDMGFGPEMKKLISCPGMPSKEQRQTLMFSATFPEEIQRLAAEFLKSN 465

Query: 578 PIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLK 637
            + V VG     C DV+Q V+ + +  K  KL+E+L +  +  +++ FV+ ++ AD +  
Sbjct: 466 YLFVAVGQVGGACRDVQQTVLQVGQFSKREKLVEILRNIGDERTMV-FVETKKKADFIAT 524

Query: 638 DLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCP 697
            L +      S+HG  +Q +R+  + DF+ G C +LVATSVAARGLD++++  V+N+  P
Sbjct: 525 FLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAARGLDIENVQHVINFDLP 584

Query: 698 NHYEDYVHRAGRTGRAGNKGYAYTFI-TEDQARYAGDIIKALELSGTAVPPDLEKL 752
           +  ++YVHR GRTGR GN G A +F   E     A  ++K L  +   VP  LE++
Sbjct: 585 STIDEYVHRIGRTGRCGNTGRAISFFDLESDNHLAQPLVKVLTDAQQDVPAWLEEI 640


>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
           sapiens]
          Length = 619

 Score =  268 bits (684), Expect = 3e-71
 Identities = 156/441 (35%), Positives = 258/441 (58%), Gaps = 13/441 (2%)

Query: 313 KQRKLLEPVDHGKIEYEPFRKNF-YVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPI 371
           ++ KL  P         P   ++ Y E P +  + ++++   + ++ GI V+G+   +PI
Sbjct: 144 EKSKLSNPQKADSEPESPLNASYVYKEHPFILNLQEDQIENLKQQL-GILVQGQEVTRPI 202

Query: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
             +  C +   + ++LKK GYE PTPIQ Q IP  + GRD++  A TGSGKT AFLLP+ 
Sbjct: 203 IDFEHCSLPEVLNHNLKKSGYEVPTPIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVI 262

Query: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLG-LRVVCVYGGTGISEQIA 490
                 R+L E + P A+I+TPTRELA+QI ++ K+    L  ++ V + GG  +  Q+ 
Sbjct: 263 -----MRALFESKTPSALILTPTRELAIQIERQAKELMSGLPRMKTVLLVGGLPLPPQLY 317

Query: 491 ELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNV 550
            L++  ++I+ TPGR++D++  +S     L  V  VV+DEAD M  MGF+ QV+ I++N+
Sbjct: 318 RLQQHVKVIIATPGRLLDIIKQSS---VELCGVKIVVVDEADTMLKMGFQQQVLDILENI 374

Query: 551 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLL 610
             D QT++ SAT P ++E LA ++L  P+ +  G +++ C++V Q ++ +E+  K  KL 
Sbjct: 375 PNDCQTILVSATIPTSIEQLASQLLHNPVRIITGEKNLPCANVRQIILWVEDPAKKKKLF 434

Query: 611 ELLGHYQE-SGSVIIFVDKQEHADGLLKDLMRAS-YPCMSLHGGIDQYDRDSIINDFKNG 668
           E+L   +     V++FVD +  AD L + + + +    +S+H    Q +R +I+     G
Sbjct: 435 EILNDKKLFKPPVLVFVDCKLGADLLSEAVQKITGLKSISIHSEKSQIERKNILKGLLEG 494

Query: 669 TCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQA 728
             +++V+T V  RGLD+  + LVVN+  P+  ++YVH+ GR GR G  G A TFI  +  
Sbjct: 495 DYEVVVSTGVLGRGLDLISVRLVVNFDMPSSMDEYVHQIGRVGRLGQNGTAITFINNNSK 554

Query: 729 RYAGDIIKALELSGTAVPPDL 749
           R   DI K ++ +G+ +PP L
Sbjct: 555 RLFWDIAKRVKPTGSILPPQL 575


>gi|51094101 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 2
           [Homo sapiens]
          Length = 881

 Score =  235 bits (600), Expect = 1e-61
 Identities = 133/371 (35%), Positives = 204/371 (54%), Gaps = 7/371 (1%)

Query: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
           G+S  +   + K GY+ PTPIQ + IP I+ G+D++ +A+TGSGKT  FLLPMF  +   
Sbjct: 102 GLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERL--- 158

Query: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
           ++     G  A+I++PTRELALQ  K  K+  K  GL+   + GG  + +Q A L    +
Sbjct: 159 KTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPD 218

Query: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557
           II+ TPGR++ +    S     L+ V YVV DEADR+F+MGF  Q+  I+  +    QTV
Sbjct: 219 IIIATPGRLVHVAVEMS---LKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTV 275

Query: 558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHY- 616
           +FSAT P+ +   AR  L++P+ +++   + +   ++    ++ E+ K   LL LL +  
Sbjct: 276 LFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTKAAVLLHLLHNVV 335

Query: 617 QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVAT 676
           +     ++FV  + HA+ L + L      C  ++  +D   R   +  F  G C  L+ T
Sbjct: 336 RPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVT 395

Query: 677 SVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIK 736
            +AARGLD+  L  V+NYS P   + ++HR GR  RAG  G AY+ +  D+  Y  D+  
Sbjct: 396 DLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHL 455

Query: 737 ALELSGTAVPP 747
            L  S T   P
Sbjct: 456 FLGRSLTLARP 466



 Score = 40.4 bits (93), Expect = 0.009
 Identities = 49/239 (20%), Positives = 95/239 (39%), Gaps = 22/239 (9%)

Query: 6   RHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDR 65
           ++YR R A+     + SR       R+KR  DR++ +R +  ++ R   ++     +  R
Sbjct: 567 KNYRSR-ATIFEINASSRDLCSQVMRAKRQKDRKAIARFQQGQQGRQEQQEGPVGPAPSR 625

Query: 66  KRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKE--- 122
             L+    ++ ++  E     S +   S    R R+    + G K ++ E R R +E   
Sbjct: 626 PALQE---KQPEKEEEEEAGESVEDIFSEVVGRKRQRSGPNRGAKRRREEARQRDQEFYI 682

Query: 123 ------------KTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEM-RKRKERVEK 169
                        +  GE    +++      D    +A N  + + + +  RK+K  V +
Sbjct: 683 PYRPKDFDSERGLSISGEGGAFEQQAAGAVLDLMGDEAQNLTRGRQQLKWDRKKKRFVGQ 742

Query: 170 WREEQRKKAMENIGELKKEIEEMKQGKKWSLED--DDDDEDDPAEAEKEGNEMEGEELD 226
             +E +KK     G       +    +KW  +   DD D D+   +++ G E  G + D
Sbjct: 743 SGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSDEEGASDRRGPERRGGKRD 801



 Score = 32.7 bits (73), Expect = 1.8
 Identities = 23/105 (21%), Positives = 44/105 (41%), Gaps = 1/105 (0%)

Query: 20  SRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRS 79
           +R R +   D++ KR   +  +   +  + E  R       R   +K  ++ +  +RD  
Sbjct: 724 TRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSD 783

Query: 80  RERRRSRSRDRRRSRSRSRGR-RSRSSSPGNKSKKTENRSRSKEK 123
            E    R    RR   R RG+  SR  +PG  + +     ++K++
Sbjct: 784 EEGASDRRGPERRGGKRDRGQGASRPHAPGTPAGRVRPELKTKQQ 828



 Score = 31.6 bits (70), Expect = 4.0
 Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 12/95 (12%)

Query: 33  KRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRSRE--------RRR 84
           +RG +RR   RDR +   R  +      R R   + ++   ++R R+++         ++
Sbjct: 790 RRGPERRGGKRDRGQGASRPHAPGTPAGRVRPELKTKQQILKQRRRAQKLHFLQRGGLKQ 849

Query: 85  SRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSR 119
             +R+RRR +   +G   R    G +SKK + R R
Sbjct: 850 LSARNRRRVQELQQGAFGR----GARSKKGKMRKR 880


>gi|164419743 DEAD (Asp-Glu-Ala-Asp) box polypeptide 54 isoform 1
           [Homo sapiens]
          Length = 882

 Score =  235 bits (600), Expect = 1e-61
 Identities = 133/371 (35%), Positives = 204/371 (54%), Gaps = 7/371 (1%)

Query: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
           G+S  +   + K GY+ PTPIQ + IP I+ G+D++ +A+TGSGKT  FLLPMF  +   
Sbjct: 102 GLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERL--- 158

Query: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
           ++     G  A+I++PTRELALQ  K  K+  K  GL+   + GG  + +Q A L    +
Sbjct: 159 KTHSAQTGARALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRMEDQFAALHENPD 218

Query: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557
           II+ TPGR++ +    S     L+ V YVV DEADR+F+MGF  Q+  I+  +    QTV
Sbjct: 219 IIIATPGRLVHVAVEMS---LKLQSVEYVVFDEADRLFEMGFAEQLQEIIARLPGGHQTV 275

Query: 558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHY- 616
           +FSAT P+ +   AR  L++P+ +++   + +   ++    ++ E+ K   LL LL +  
Sbjct: 276 LFSATLPKLLVEFARAGLTEPVLIRLDVDTKLNEQLKTSFFLVREDTKAAVLLHLLHNVV 335

Query: 617 QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVAT 676
           +     ++FV  + HA+ L + L      C  ++  +D   R   +  F  G C  L+ T
Sbjct: 336 RPQDQTVVFVATKHHAEYLTELLTTQRVSCAHIYSALDPTARKINLAKFTLGKCSTLIVT 395

Query: 677 SVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIK 736
            +AARGLD+  L  V+NYS P   + ++HR GR  RAG  G AY+ +  D+  Y  D+  
Sbjct: 396 DLAARGLDIPLLDNVINYSFPAKGKLFLHRVGRVARAGRSGTAYSLVAPDEIPYLLDLHL 455

Query: 737 ALELSGTAVPP 747
            L  S T   P
Sbjct: 456 FLGRSLTLARP 466



 Score = 40.4 bits (93), Expect = 0.009
 Identities = 49/239 (20%), Positives = 95/239 (39%), Gaps = 22/239 (9%)

Query: 6   RHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDR 65
           ++YR R A+     + SR       R+KR  DR++ +R +  ++ R   ++     +  R
Sbjct: 567 KNYRSR-ATIFEINASSRDLCSQVMRAKRQKDRKAIARFQQGQQGRQEQQEGPVGPAPSR 625

Query: 66  KRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKE--- 122
             L+    ++ ++  E     S +   S    R R+    + G K ++ E R R +E   
Sbjct: 626 PALQE---KQPEKEEEEEAGESVEDIFSEVVGRKRQRSGPNRGAKRRREEARQRDQEFYI 682

Query: 123 ------------KTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEM-RKRKERVEK 169
                        +  GE    +++      D    +A N  + + + +  RK+K  V +
Sbjct: 683 PYRPKDFDSERGLSISGEGGAFEQQAAGAVLDLMGDEAQNLTRGRQQLKWDRKKKRFVGQ 742

Query: 170 WREEQRKKAMENIGELKKEIEEMKQGKKWSLED--DDDDEDDPAEAEKEGNEMEGEELD 226
             +E +KK     G       +    +KW  +   DD D D+   +++ G E  G + D
Sbjct: 743 SGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSDEEGASDRRGPERRGGKRD 801



 Score = 32.7 bits (73), Expect = 1.8
 Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 9/137 (6%)

Query: 2   GRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSR 61
           G+E +   K  + R  S S  R      K+ ++ DD     RD D      R   +RR  
Sbjct: 744 GQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDD-----RDSDEEGASDRRGPERRGG 798

Query: 62  SRDRKRLRRSRSRERDRSRERRRSRSRDRRR-SRSRSRGRRSRSSSPGN-KSKKTENRSR 119
            RDR +   SR         R R   + +++  + R R ++      G  K     NR R
Sbjct: 799 KRDRGQAGASRPHAPGTPAGRVRPELKTKQQILKQRRRAQKLHFLQRGGLKQLSARNRRR 858

Query: 120 SKEKTDG--GESSKEKK 134
            +E   G  G  ++ KK
Sbjct: 859 VQELQQGAFGRGARSKK 875



 Score = 32.3 bits (72), Expect = 2.4
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 2/106 (1%)

Query: 20  SRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRDKRRSRSRDRKRLRRSRSRERDRS 79
           +R R +   D++ KR   +  +   +  + E  R       R   +K  ++ +  +RD  
Sbjct: 724 TRGRQQLKWDRKKKRFVGQSGQEDKKKIKTESGRYISSSYKRDLYQKWKQKQKIDDRDSD 783

Query: 80  RERRRSRSRDRRRSRSRSRGR--RSRSSSPGNKSKKTENRSRSKEK 123
            E    R    RR   R RG+   SR  +PG  + +     ++K++
Sbjct: 784 EEGASDRRGPERRGGKRDRGQAGASRPHAPGTPAGRVRPELKTKQQ 829


>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
           [Homo sapiens]
          Length = 455

 Score =  230 bits (587), Expect = 5e-60
 Identities = 146/447 (32%), Positives = 235/447 (52%), Gaps = 27/447 (6%)

Query: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
           K++   G++  +  +  + G+ KPT IQ +AIP  + GRD+IG+A+TGSGKT AF LP+ 
Sbjct: 24  KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83

Query: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAE 491
             +     LE  +   A+++TPTRELA QI+++ +    ++G++   + GG     Q   
Sbjct: 84  NAL-----LETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 138

Query: 492 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVR 551
           L +   II+ TPGR+ID L    G   NLR + Y+V+DEADR+ +M FE +V +I+  + 
Sbjct: 139 LAKKPHIIIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKVIP 196

Query: 552 PDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLE 611
            DR+T +FSAT  + ++ L R  L  P++  V  +      ++Q  I I  + K   L+ 
Sbjct: 197 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKDTYLVY 256

Query: 612 LLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCK 671
           +L       S +IF     +       L    +  + LHG + Q  R   +N FK     
Sbjct: 257 ILNELA-GNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARS 315

Query: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731
           +L+AT VA+RGLD+ H+ +VVN+  P H +DY+HR GRT RAG  G A TF+T+    Y 
Sbjct: 316 ILLATDVASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ----YD 371

Query: 732 GDIIKALE-LSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFDETEQALANE 790
            ++ + +E L G  +P         F  Q      + ++ +    +  +F   E     E
Sbjct: 372 VELFQRIEHLIGKKLP--------GFPTQDDEVMMLTERVA----EAQRFARMELREHGE 419

Query: 791 RKKLQKAALGLQDSDDEDAAVDIDEQI 817
           +KK  +   G  D+DD + A+ +  ++
Sbjct: 420 KKKRSREDAG--DNDDTEGAIGVRNKV 444


>gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo
           sapiens]
          Length = 483

 Score =  218 bits (554), Expect = 3e-56
 Identities = 141/480 (29%), Positives = 250/480 (52%), Gaps = 30/480 (6%)

Query: 374 WVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRH 433
           + + G+S  ++   ++ G ++PTP+Q   IPAI+ GRD +G AKTGSGKT AF+LP+   
Sbjct: 4   FAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPIL-- 61

Query: 434 IMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELK 493
              Q+  E+  G   +++TPTRELA QI ++ +   K LGL+   + GG  +  Q  EL 
Sbjct: 62  ---QKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPLGLKDCIIVGGMDMVAQALELS 118

Query: 494 RGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMG---FEPQVMRIVDNV 550
           R   +++ TPGR+ D L   S    +++++ ++V+DEADR+ + G   F   +  I+  V
Sbjct: 119 RKPHVVIATPGRLADHL--RSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAV 176

Query: 551 RPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLL 610
              RQT++FSAT    +  L     ++P   +          ++Q+ +++ E+ K   L+
Sbjct: 177 PARRQTLLFSATLTDTLRELQGLATNQPFFWEAQAPVSTVEQLDQRYLLVPEKVKDAYLV 236

Query: 611 ELLGHYQ---ESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKN 667
            L+  +Q   E  S+IIF +  +    L   L + S+P ++LH  + Q +R + +  FK+
Sbjct: 237 HLIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKS 296

Query: 668 GTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQ 727
              ++L+AT VA+RGLD+  + +V+N++ P   + Y+HR GRT RAG +G A T +T+  
Sbjct: 297 SIYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVTQ-- 354

Query: 728 ARYAGDIIKALELSGTAVPPDLEKLWSDFKD--QQKAEGKIIKKSSGFSGKGFKFDETEQ 785
             Y   ++ A+E     +   LE+   +  +  Q   +  ++++      +   FDE ++
Sbjct: 355 --YDIHLVHAIE---EQIKKKLEEFSVEEAEVLQILTQVNVVRRECEIKLEAAHFDEKKE 409

Query: 786 ALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPAPTAGN 845
              N+RK+L      + +  D D       ++  +    +R K+          A  AG+
Sbjct: 410 --INKRKQL------ILEGKDPDLEAKRKAELAKIKQKNRRFKEKVEETLKRQKAGRAGH 461


>gi|38569505 ATP-dependent RNA helicase ROK1 isoform a [Homo
           sapiens]
          Length = 599

 Score =  217 bits (553), Expect = 4e-56
 Identities = 158/527 (29%), Positives = 268/527 (50%), Gaps = 26/527 (4%)

Query: 252 GNEKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQ 311
           GN+K    +V  V     T +   + +KK+  L E  ++  +   +    ++ +   G  
Sbjct: 50  GNKK----SVPGVCGASQTHQKPQNGEKKEESLTERKREQSKKKRKTMTSEIASQEEGAT 105

Query: 312 TKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPI 371
            +    +E     KIE +  ++   +   +L  + +E++N  R + + I V+G   P PI
Sbjct: 106 IQWMSSVE----AKIEDKKVQRESKLTSGKLENLRKEKINFLRNKHK-IHVQGTDLPDPI 160

Query: 372 KSWVQCG----ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFL 427
            ++ Q      I+ ++L ++   G++ PTPIQ QAIP ++ GR+L+  A TGSGKT+AF 
Sbjct: 161 ATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFS 220

Query: 428 LPMFRHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISE 487
           +P    I+ Q      +G  A+I++PTRELA QI +E  K S+  G R+  ++     ++
Sbjct: 221 IP----ILMQLKQPANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAK 276

Query: 488 QIA-ELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD---MGFEPQV 543
           +   +  +  +I+V TP R+I +L  +   + +L  V ++V+DE+D++F+    GF  Q+
Sbjct: 277 KFGPKSSKKFDILVTTPNRLIYLLKQDPPGI-DLASVEWLVVDESDKLFEDGKTGFRDQL 335

Query: 544 MRIVDNVRPDR-QTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEE 602
             I       + +  MFSATF   +E   +  L   I V +G R+     VEQ+++ +  
Sbjct: 336 ASIFLACTSHKVRRAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGS 395

Query: 603 EKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSII 662
           E   L  +  L     +  V++FV   E A  L  +L+        +H    Q  RD+ +
Sbjct: 396 ETGKLLAMRELVKKGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTV 455

Query: 663 NDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTF 722
           + F+ G   +L+ T++ ARG+D K + LV+NY  P    +Y+HR GRTGRAGNKG A TF
Sbjct: 456 HSFRAGKIWVLICTALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITF 515

Query: 723 ITEDQARYAGDIIKALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKK 769
            TED       +   ++ +G  VP  ++        Q+K   K+IKK
Sbjct: 516 FTEDDKPLLRSVANVIQQAGCPVPEYIKGFQKLLSKQKK---KMIKK 559


>gi|38569503 ATP-dependent RNA helicase ROK1 isoform b [Homo
           sapiens]
          Length = 491

 Score =  216 bits (549), Expect = 1e-55
 Identities = 146/454 (32%), Positives = 241/454 (53%), Gaps = 18/454 (3%)

Query: 325 KIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCG----IS 380
           KIE +  ++   +   +L  + +E++N  R + + I V+G   P PI ++ Q      I+
Sbjct: 7   KIEDKKVQRESKLTSGKLENLRKEKINFLRNKHK-IHVQGTDLPDPIATFQQLDQEYKIN 65

Query: 381 MKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
            ++L ++   G++ PTPIQ QAIP ++ GR+L+  A TGSGKT+AF +P    I+ Q   
Sbjct: 66  SRLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIP----ILMQLKQ 121

Query: 441 EEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIA-ELKRGAEII 499
              +G  A+I++PTRELA QI +E  K S+  G R+  ++     +++   +  +  +I+
Sbjct: 122 PANKGFRALIISPTRELASQIHRELIKISEGTGFRIHMIHKAAVAAKKFGPKSSKKFDIL 181

Query: 500 VCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD---MGFEPQVMRIVDNVRPDR-Q 555
           V TP R+I +L  +   + +L  V ++V+DE+D++F+    GF  Q+  I       + +
Sbjct: 182 VTTPNRLIYLLKQDPPGI-DLASVEWLVVDESDKLFEDGKTGFRDQLASIFLACTSHKVR 240

Query: 556 TVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGH 615
             MFSATF   +E   +  L   I V +G R+     VEQ+++ +  E   L  +  L  
Sbjct: 241 RAMFSATFAYDVEQWCKLNLDNVISVSIGARNSAVETVEQELLFVGSETGKLLAMRELVK 300

Query: 616 YQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVA 675
              +  V++FV   E A  L  +L+        +H    Q  RD+ ++ F+ G   +L+ 
Sbjct: 301 KGFNPPVLVFVQSIERAKELFHELIYEGINVDVIHAERTQQQRDNTVHSFRAGKIWVLIC 360

Query: 676 TSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDII 735
           T++ ARG+D K + LV+NY  P    +Y+HR GRTGRAGNKG A TF TED       + 
Sbjct: 361 TALLARGIDFKGVNLVINYDFPTSSVEYIHRIGRTGRAGNKGKAITFFTEDDKPLLRSVA 420

Query: 736 KALELSGTAVPPDLEKLWSDFKDQQKAEGKIIKK 769
             ++ +G  VP  ++        Q+K   K+IKK
Sbjct: 421 NVIQQAGCPVPEYIKGFQKLLSKQKK---KMIKK 451


>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
           [Homo sapiens]
          Length = 411

 Score =  214 bits (545), Expect = 3e-55
 Identities = 123/358 (34%), Positives = 201/358 (56%), Gaps = 10/358 (2%)

Query: 378 GISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ 437
           G+   +L  +  +G+EKP+ IQ +AI  I+ GRD+I  +++G+GKT  F + + + +  Q
Sbjct: 44  GLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQ 103

Query: 438 RSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAE 497
             + E +   A+I+ PTRELA+QI K        + ++     GGT + E I +L  G  
Sbjct: 104 --VRETQ---ALILAPTRELAVQIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQH 158

Query: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557
           ++  TPGR+ DM+   S R    R +  +VLDEAD M + GF+ Q+  +   + P  Q V
Sbjct: 159 VVAGTPGRVFDMIRRRSLRT---RAIKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVV 215

Query: 558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIE-EEKKFLKLLELLGHY 616
           + SAT P  +  +  + ++ PI + V    +    ++Q  + +E EE KF  L +L    
Sbjct: 216 LISATLPHEILEMTNKFMTDPIRILVKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTL 275

Query: 617 QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVAT 676
             + +VI F + +   D L + +  A++   S+HG + Q +R+SI+ +F++G  ++L++T
Sbjct: 276 TITQAVI-FCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLIST 334

Query: 677 SVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDI 734
            V ARGLDV  + L++NY  PN+ E Y+HR GR+GR G KG A  F+  D  R   DI
Sbjct: 335 DVWARGLDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKNDDIRILRDI 392


>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
           sapiens]
          Length = 796

 Score =  210 bits (534), Expect = 6e-54
 Identities = 165/592 (27%), Positives = 279/592 (47%), Gaps = 69/592 (11%)

Query: 254 EKKSGPTVTKVVTVVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEVDLQ--------- 304
           +K++  T+ + +  V  K+   D + K G+L E +++A E S  +E+ DLQ         
Sbjct: 110 KKRAATTLDEKIEKVRKKRKTEDKEAKSGKL-EKEKEAKEGSEPKEQEDLQENDEEGSED 168

Query: 305 -TALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAK-MSQEEVNVFRLEMEGITV 362
             + T Y +    +L   D  K++    +K    E     +  SQ + N+          
Sbjct: 169 EASETDYSSADENILTKADTLKVKDRKKKKKKGQEAGGFFEDASQYDENL---------- 218

Query: 363 KGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGK 422
                     S+    +S  +L ++   G+++PTPIQ   IP  + G+D+   A TG+GK
Sbjct: 219 ----------SFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGK 268

Query: 423 TIAFLLPMFRHIMDQRSLEEGEGPIA--VIMTPTRELALQITKECKKFSKTLGLRVVCVY 480
           T AF LP+   ++     +  + P+   +++ PTREL +Q+    ++ ++   +      
Sbjct: 269 TAAFALPVLERLI----YKPRQAPVTRVLVLVPTRELGIQVHSVTRQLAQFCNITTCLAV 324

Query: 481 GGTGISEQIAELKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFE 540
           GG  +  Q A L+   +I++ TPGR+ID L  ++    +L  +  ++LDEADRM D  FE
Sbjct: 325 GGLDVKSQEAALRAAPDILIATPGRLIDHL--HNCPSFHLSSIEVLILDEADRMLDEYFE 382

Query: 541 PQVMRIVDNVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVI 600
            Q+  I+      RQT++FSAT    ++ LA   L  P+ + V   + V   + Q+ I I
Sbjct: 383 EQMKEIIRMCSHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRI 442

Query: 601 ----EEEKKFLKLLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQY 656
               E +++ +    L   + +   +     KQ H   +L  LM        LHG + Q 
Sbjct: 443 RPNREGDREAIVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVG--ELHGNLSQT 500

Query: 657 DRDSIINDFKNGTCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNK 716
            R   +  FK+    +LVAT VAARGLD++ +  V+N++ PN  + YVHR GRT RAG  
Sbjct: 501 QRLEALRRFKDEQIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRA 560

Query: 717 GYAYTFITEDQARYAGDIIKALE--LSGTAVPPD--------LEKLWSDF---------- 756
           G + + + ED+ +   +I+KA +  +    +P D        +EK+  D           
Sbjct: 561 GRSVSLVGEDERKMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEE 620

Query: 757 KDQQKAEGKI-IKKSSGFSGKGFKFDETEQA--LANERKKLQKAALGLQDSD 805
           K+ Q++E +I   K     GK     E E++     E +K +K A  LQ+ D
Sbjct: 621 KEMQQSEAQINTAKRLLEKGKEAVVQEPERSWFQTKEERKKEKIAKALQEFD 672



 Score = 31.6 bits (70), Expect = 4.0
 Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 15/113 (13%)

Query: 121 KEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRK------ERVEKWREEQ 174
           ++K  G   S +   D    E E   D G++    +  +++K++      E++EK R+++
Sbjct: 70  RQKALGKNRSADFNPDFVFTEKEGTYD-GSWALADVMSQLKKKRAATTLDEKIEKVRKKR 128

Query: 175 RKKAME-NIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELD 226
           + +  E   G+L+KE +E K+G       +  +++D  E ++EG+E E  E D
Sbjct: 129 KTEDKEAKSGKLEKE-KEAKEG------SEPKEQEDLQENDEEGSEDEASETD 174



 Score = 31.6 bits (70), Expect = 4.0
 Identities = 21/102 (20%), Positives = 52/102 (50%), Gaps = 8/102 (7%)

Query: 80  RERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSKEKTDGGESSKEKKKDKDD 139
           +++R + + D +  + R + +        +K  K+    + KE  +G E  KE++  +++
Sbjct: 109 KKKRAATTLDEKIEKVRKKRKTE------DKEAKSGKLEKEKEAKEGSE-PKEQEDLQEN 161

Query: 140 KEDEKEKDAGNFDQNKLEEEMRKRKERVE-KWREEQRKKAME 180
            E+  E +A   D +  +E +  + + ++ K R++++KK  E
Sbjct: 162 DEEGSEDEASETDYSSADENILTKADTLKVKDRKKKKKKGQE 203



 Score = 30.4 bits (67), Expect = 9.0
 Identities = 46/218 (21%), Positives = 88/218 (40%), Gaps = 31/218 (14%)

Query: 6   RHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERS------------R 53
           +HY  R     R+G   RS S        G+D R   ++  +  +              +
Sbjct: 545 KHYVHRVGRTARAGRAGRSVSLV------GEDERKMLKEIVKAAKAPVKARILPQDVILK 598

Query: 54  SRDKRRSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKK 113
            RDK     +D   + +  + E+    E ++S ++     R   +G+ +    P     +
Sbjct: 599 FRDKIEKMEKDVYAVLQLEAEEK----EMQQSEAQINTAKRLLEKGKEAVVQEPERSWFQ 654

Query: 114 TENRSRSKEKT-----DGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRK--ER 166
           T+   R KEK      +   + + KKK K   +D K+K     ++    E ++ +   ER
Sbjct: 655 TKEE-RKKEKIAKALQEFDLALRGKKKRKKFMKDAKKKGEMTAEERSQFEILKAQMFAER 713

Query: 167 VEKW-REEQRKKAMENIGELKKEIEEMKQGKKWSLEDD 203
           + K  R  +R +AM     ++   ++ KQGKK   +++
Sbjct: 714 LAKRNRRAKRARAMPEEEPVRGPAKKQKQGKKSVFDEE 751


>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
           sapiens]
          Length = 483

 Score =  205 bits (521), Expect = 2e-52
 Identities = 117/374 (31%), Positives = 206/374 (55%), Gaps = 11/374 (2%)

Query: 379 ISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQR 438
           +  ++L  + + G+EKP+PIQ ++IP  +SGRD++  AK G+GK+ A+L+P+   +  ++
Sbjct: 103 LKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKK 162

Query: 439 SLEEGEGPIAVIMTPTRELALQITKECKKFSKTLG-LRVVCVYGGTGISEQIAELKRGAE 497
              +     A+++ PTRELALQ+++ C + SK +G  +V+   GGT + + I  L     
Sbjct: 163 DNIQ-----AMVIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVH 217

Query: 498 IIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTV 557
           +++ TPGR++D++     +V +   V  +VLDEAD++    F   +  I+  +  +RQ +
Sbjct: 218 VVIATPGRILDLIKKGVAKVDH---VQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQIL 274

Query: 558 MFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQ 617
           ++SATFP +++      L KP E+ +    +    V Q    + E +K   L  L    Q
Sbjct: 275 LYSATFPLSVQKFMNSHLQKPYEINLM-EELTLKGVTQYYAYVTERQKVHCLNTLFSRLQ 333

Query: 618 ESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATS 677
            + S IIF +  +  + L K + +  Y C  +H  + Q  R+ + +DF+NG C+ LV T 
Sbjct: 334 INQS-IIFCNSSQRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTD 392

Query: 678 VAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDIIKA 737
           +  RG+D++ + +V+N+  P   E Y+HR GR+GR G+ G A   IT D       I + 
Sbjct: 393 LFTRGIDIQAVNVVINFDFPKLAETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQ 452

Query: 738 LELSGTAVPPDLEK 751
           L      +P +++K
Sbjct: 453 LGTEIKPIPSNIDK 466


>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
           [Homo sapiens]
          Length = 406

 Score =  203 bits (517), Expect = 6e-52
 Identities = 118/366 (32%), Positives = 197/366 (53%), Gaps = 11/366 (3%)

Query: 371 IKSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
           + S+    +S  +L  +  +G+EKP+ IQ +AI   + G D+I  A++G+GKT  F + +
Sbjct: 31  VDSFDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISI 90

Query: 431 FRHI-MDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQI 489
            + I +D ++ +      A+++ PTRELA QI K        +G       GGT +  ++
Sbjct: 91  LQQIELDLKATQ------ALVLAPTRELAQQIQKVVMALGDYMGASCHACIGGTNVRAEV 144

Query: 490 AELKRGA-EIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD 548
            +L+  A  IIV TPGR+ DML   + R  + + +   VLDEAD M   GF+ Q+  I  
Sbjct: 145 QKLQMEAPHIIVGTPGRVFDML---NRRYLSPKYIKMFVLDEADEMLSRGFKDQIYDIFQ 201

Query: 549 NVRPDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLK 608
            +  + Q V+ SAT P  +  + ++ +  PI + V    +    + Q  I +E E+  L 
Sbjct: 202 KLNSNTQVVLLSATMPSDVLEVTKKFMRDPIRILVKKEELTLEGIRQFYINVEREEWKLD 261

Query: 609 LLELLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNG 668
            L  L         +IF++ +   D L + +    +   ++HG +DQ +RD I+ +F++G
Sbjct: 262 TLCDLYETLTITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSG 321

Query: 669 TCKLLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQA 728
           + ++L+ T + ARG+DV+ + LV+NY  P + E+Y+HR GR GR G KG A   +TE+  
Sbjct: 322 SSRVLITTDLLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEEDK 381

Query: 729 RYAGDI 734
           R   DI
Sbjct: 382 RTLRDI 387


>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
           sapiens]
          Length = 407

 Score =  201 bits (512), Expect = 2e-51
 Identities = 119/353 (33%), Positives = 191/353 (54%), Gaps = 9/353 (2%)

Query: 383 ILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLEE 442
           +L  +  +G+EKP+ IQ +AI   + G D+I  A++G+GKT  F +     I+ Q  +E 
Sbjct: 44  LLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAIS----ILQQLEIEF 99

Query: 443 GEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGA-EIIVC 501
            E   A+++ PTRELA QI K        +G       GGT +  ++ +L+  A  I+V 
Sbjct: 100 KETQ-ALVLAPTRELAQQIQKVILALGDYMGATCHACIGGTNVRNEMQKLQAEAPHIVVG 158

Query: 502 TPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVRPDRQTVMFSA 561
           TPGR+ DML   + R  + + +   VLDEAD M   GF+ Q+  I   +    Q V+ SA
Sbjct: 159 TPGRVFDML---NRRYLSPKWIKMFVLDEADEMLSRGFKDQIYEIFQKLNTSIQVVLLSA 215

Query: 562 TFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLELLGHYQESGS 621
           T P  +  + ++ +  PI + V    +    ++Q  I +E E+  L  L  L        
Sbjct: 216 TMPTDVLEVTKKFMRDPIRILVKKEELTLEGIKQFYINVEREEWKLDTLCDLYETLTITQ 275

Query: 622 VIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 681
            +IF++ +   D L + +    +   +LHG +DQ +RD I+ +F++G+ ++L+ T + AR
Sbjct: 276 AVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLAR 335

Query: 682 GLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYAGDI 734
           G+DV+ + LV+NY  P + E+Y+HR GR GR G KG A  F+TE+  R   DI
Sbjct: 336 GIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEEDKRILRDI 388


>gi|50659095 DEAD (Asp-Glu-Ala-Asp) box polypeptide 21 [Homo
           sapiens]
          Length = 783

 Score =  198 bits (504), Expect = 2e-50
 Identities = 166/578 (28%), Positives = 274/578 (47%), Gaps = 65/578 (11%)

Query: 155 KLEEEMRKRKERVEKWREEQRKKAMENIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAE 214
           K  E +RK+ E  EK  + +  K  E   E +    + KQ KK +   + D     ++  
Sbjct: 18  KKGETLRKQTEEKEKKEKPKSDKTEEIAEEEETVFPKAKQVKKKAEPSEVDMNSPKSKKA 77

Query: 215 KEGNEMEGEELDPLDAYMEEVKEEVKKFNMRSVKGGGGNEKKSGPTVTKVVTVVTTKKAV 274
           K+  E    ++ P    + + KE ++K                     KVV+   TKK  
Sbjct: 78  KKKEEPSQNDISPKTKSLRKKKEPIEK---------------------KVVSS-KTKKVT 115

Query: 275 VDSDKKKGELMENDQDAMEYSSEEEEVDLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKN 334
            + +  + E+   D    +   +E+E++ +T     + K  KL     H + +  P    
Sbjct: 116 KNEEPSEEEI---DAPKPKKMKKEKEMNGET-----REKSPKLKNGFPHPEPDCNP---- 163

Query: 335 FYVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQCGISMKILNSLKKHGYEK 394
                   ++ + EE N   +E E    + +G      ++    IS + +  LK  G   
Sbjct: 164 --------SEAASEESNS-EIEQEIPVEQKEG------AFSNFPISEETIKLLKGRGVTF 208

Query: 395 PTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQ-RSLEEGEGPIAVIMTP 453
             PIQ +    + SG+DLI  A+TG+GKT +F +P+   +  + +  + G  P  +++ P
Sbjct: 209 LFPIQAKTFHHVYSGKDLIAQARTGTGKTFSFAIPLIEKLHGELQDRKRGRAPQVLVLAP 268

Query: 454 TRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAAN 513
           TRELA Q++K+    +K L   V C YGGT    Q   ++ G +I+V TPGR+ D +   
Sbjct: 269 TRELANQVSKDFSDITKKLS--VACFYGGTPYGGQFERMRNGIDILVGTPGRIKDHI--Q 324

Query: 514 SGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVD-----NVRPDRQTVMFSATFPRAME 568
           +G++ +L ++ +VVLDE D+M DMGF  QV  I+      +   + QT++FSAT P  + 
Sbjct: 325 NGKL-DLTKLKHVVLDEVDQMLDMGFADQVEEILSVAYKKDSEDNPQTLLFSATCPHWVF 383

Query: 569 ALARRILSKPIE-VQVGGRSV--VCSDVEQQVIVIEEEKKFLKLLELLGHYQ-ESGSVII 624
            +A++ +    E V + G+        VE   I     ++   + +++  Y    G  II
Sbjct: 384 NVAKKYMKSTYEQVDLIGKKTQKTAITVEHLAIKCHWTQRAAVIGDVIRVYSGHQGRTII 443

Query: 625 FVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAARGLD 684
           F + ++ A  L ++         SLHG I Q  R+  +  F+NG+  +LVAT+VAARGLD
Sbjct: 444 FCETKKEAQELSQN-SAIKQDAQSLHGDIPQKQREITLKGFRNGSFGVLVATNVAARGLD 502

Query: 685 VKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTF 722
           +  + LV+  S P   E Y+HR+GRTGRAG  G    F
Sbjct: 503 IPEVDLVIQSSPPKDVESYIHRSGRTGRAGRTGVCICF 540



 Score = 37.4 bits (85), Expect = 0.073
 Identities = 34/177 (19%), Positives = 77/177 (43%), Gaps = 5/177 (2%)

Query: 67  RLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRS-KEKTD 125
           +LR     E D + ++  +  +       + + +  ++     + +    +++  K+K +
Sbjct: 4   KLRSDAGLESDTAMKKGETLRKQTEEKEKKEKPKSDKTEEIAEEEETVFPKAKQVKKKAE 63

Query: 126 GGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQR-KKAMENIGE 184
             E      K K  K  +KE+ + N D +   + +RK+KE +EK     + KK  +N   
Sbjct: 64  PSEVDMNSPKSK--KAKKKEEPSQN-DISPKTKSLRKKKEPIEKKVVSSKTKKVTKNEEP 120

Query: 185 LKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKK 241
            ++EI+  K  K    ++ + +  + +   K G      + +P +A  EE   E+++
Sbjct: 121 SEEEIDAPKPKKMKKEKEMNGETREKSPKLKNGFPHPEPDCNPSEAASEESNSEIEQ 177



 Score = 35.0 bits (79), Expect = 0.36
 Identities = 31/171 (18%), Positives = 76/171 (44%), Gaps = 12/171 (7%)

Query: 59  RSRSRDRKRLRRSRSRERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRS 118
           R ++ ++++  + +S + +   E   +     ++ + ++       +SP +K  K     
Sbjct: 24  RKQTEEKEKKEKPKSDKTEEIAEEEETVFPKAKQVKKKAEPSEVDMNSPKSKKAK----- 78

Query: 119 RSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKA 178
           + +E +    S K K   K  K++  EK   +    K+ +     +E ++  + ++ KK 
Sbjct: 79  KKEEPSQNDISPKTKSLRK--KKEPIEKKVVSSKTKKVTKNEEPSEEEIDAPKPKKMKKE 136

Query: 179 MENIGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLD 229
            E  GE +++  ++K G         + + +P+EA  E +  E E+  P++
Sbjct: 137 KEMNGETREKSPKLKNG-----FPHPEPDCNPSEAASEESNSEIEQEIPVE 182



 Score = 33.9 bits (76), Expect = 0.81
 Identities = 17/48 (35%), Positives = 26/48 (54%)

Query: 74  RERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPGNKSKKTENRSRSK 121
           RE  R    +R  +R  R  R  SRG R + S  GNKS +++N+ + +
Sbjct: 728 REGSRGFRGQRDGNRRFRGQREGSRGPRGQRSGGGNKSNRSQNKGQKR 775


>gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
           [Homo sapiens]
          Length = 406

 Score =  195 bits (496), Expect = 2e-49
 Identities = 133/447 (29%), Positives = 218/447 (48%), Gaps = 76/447 (17%)

Query: 372 KSWVQCGISMKILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMF 431
           K++   G++  +  +  + G+ KPT IQ +AIP  + GRD+IG+A+TGSGKT AF LP+ 
Sbjct: 24  KTFKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPIL 83

Query: 432 RHIMDQRSLEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGTGISEQIAE 491
             +     LE  +   A+++TPTRELA QI+++ +    ++G++   + GG     Q   
Sbjct: 84  NAL-----LETPQRLFALVLTPTRELAFQISEQFEALGSSIGVQSAVIVGGIDSMSQSLA 138

Query: 492 LKRGAEIIVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFDMGFEPQVMRIVDNVR 551
           L +   II+ TPGR+ID L    G   NLR + Y+V+DEADR+ +M FE +V +I+  + 
Sbjct: 139 LAKKPHIIIATPGRLIDHLENTKG--FNLRALKYLVMDEADRILNMDFETEVDKILKVIP 196

Query: 552 PDRQTVMFSATFPRAMEALARRILSKPIEVQVGGRSVVCSDVEQQVIVIEEEKKFLKLLE 611
            DR+T +FSAT  + ++ L R  L  P++  V  +      ++Q  I I  + K  +L  
Sbjct: 197 RDRKTFLFSATMTKKVQKLQRAALKNPVKCAVSSKYQTVEKLQQYYIFIPSKFKSKRLGS 256

Query: 612 LLGHYQESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCK 671
           L     ++ S+++  D                                            
Sbjct: 257 LNKFKAKARSILLATD-------------------------------------------- 272

Query: 672 LLVATSVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFITEDQARYA 731
                 VA+RGLD+ H+ +VVN+  P H +DY+HR GRT RAG  G A TF+T+    Y 
Sbjct: 273 ------VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVTQ----YD 322

Query: 732 GDIIKALE-LSGTAVPPDLEKLWSDFKDQQKAEGKIIKKSSGFSGKGFKFDETEQALANE 790
            ++ + +E L G  +P         F  Q      + ++ +    +  +F   E     E
Sbjct: 323 VELFQRIEHLIGKKLP--------GFPTQDDEVMMLTERVA----EAQRFARMELREHGE 370

Query: 791 RKKLQKAALGLQDSDDEDAAVDIDEQI 817
           +KK  +   G  D+DD + A+ +  ++
Sbjct: 371 KKKRSREDAG--DNDDTEGAIGVRNKV 395


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.312    0.130    0.357 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,465,855
Number of Sequences: 37866
Number of extensions: 1860089
Number of successful extensions: 47750
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 1013
Number of HSP's that attempted gapping in prelim test: 12333
Number of HSP's gapped (non-prelim): 13379
length of query: 1031
length of database: 18,247,518
effective HSP length: 112
effective length of query: 919
effective length of database: 14,006,526
effective search space: 12871997394
effective search space used: 12871997394
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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