Search of human proteins with 41281429

Search of human proteins with 41281429

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41281429 basic leucine zipper and W2 domains 1 [Homo
sapiens]
         (353 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41281429 basic leucine zipper and W2 domains 1 [Homo sapiens]      693   0.0  
gi|7661744 basic leucine zipper and W2 domains 2 [Homo sapiens]       402   e-112
gi|229577398 basic leucine zipper and W2 domains 2 [Homo sapiens]     402   e-112
gi|83267879 eukaryotic translation initiation factor 2B, subunit...    49   5e-06
gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 ...    42   8e-04
gi|110630018 eukaryotic translation initiation factor 4 gamma, 2...    41   0.001
gi|4503539 eukaryotic translation initiation factor 4 gamma, 2 i...    41   0.001
gi|21361337 eukaryotic translation initiation factor 5 [Homo sap...    37   0.020
gi|37537716 eukaryotic translation initiation factor 5 [Homo sap...    37   0.020
gi|38201621 eukaryotic translation initiation factor 4 gamma, 1 ...    37   0.027
gi|38201627 eukaryotic translation initiation factor 4 gamma, 1 ...    37   0.027
gi|38201625 eukaryotic translation initiation factor 4 gamma, 1 ...    37   0.027
gi|38201623 eukaryotic translation initiation factor 4 gamma, 1 ...    37   0.027
gi|38201619 eukaryotic translation initiation factor 4 gamma, 1 ...    37   0.027
gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo sa...    35   0.13 
gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens]            33   0.30 
gi|239745079 PREDICTED: Putative golgin subfamily A member 6-lik...    33   0.50 
gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens]                   31   1.5  
gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens]                   31   1.5  
gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens]                   31   1.5  
gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens]                   31   1.5  
gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens]                   31   1.5  
gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens]                   31   1.5  
gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens]                   31   1.5  
gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens]                    31   1.5  
gi|154354990 ankyrin repeat domain 26 [Homo sapiens]                   31   1.5  
gi|38348729 hypothetical protein LOC203238 [Homo sapiens]              31   1.5  
gi|210147567 hypothetical protein LOC220081 [Homo sapiens]             31   1.9  
gi|28558993 intraflagellar transport 88 homolog isoform 1 [Homo ...    31   1.9  
gi|28329439 intraflagellar transport 88 homolog isoform 2 [Homo ...    31   1.9  

>gi|41281429 basic leucine zipper and W2 domains 1 [Homo sapiens]
          Length = 353

 Score =  693 bits (1788), Expect = 0.0
 Identities = 353/353 (100%), Positives = 353/353 (100%)

Query: 1   MNNQKQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAK 60
           MNNQKQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAK
Sbjct: 1   MNNQKQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAK 60

Query: 61  LDYRRYAETLFDILVAGGMLAPGGTLADDMMRTDVCVFAAQEDLETMQAFAQVFNKLIRR 120
           LDYRRYAETLFDILVAGGMLAPGGTLADDMMRTDVCVFAAQEDLETMQAFAQVFNKLIRR
Sbjct: 61  LDYRRYAETLFDILVAGGMLAPGGTLADDMMRTDVCVFAAQEDLETMQAFAQVFNKLIRR 120

Query: 121 YKYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGVLLANGTLNASILNSLYNENLVKEG 180
           YKYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGVLLANGTLNASILNSLYNENLVKEG
Sbjct: 121 YKYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGVLLANGTLNASILNSLYNENLVKEG 180

Query: 181 VSAAFAVKLFKSWINEKDINAVAASLRKVSMDNRLMELFPANKQSVEHFTKYFTEAGLKE 240
           VSAAFAVKLFKSWINEKDINAVAASLRKVSMDNRLMELFPANKQSVEHFTKYFTEAGLKE
Sbjct: 181 VSAAFAVKLFKSWINEKDINAVAASLRKVSMDNRLMELFPANKQSVEHFTKYFTEAGLKE 240

Query: 241 LSEYVRNQQTIGARKELQKELQEQMSRGDPFKDIILYVKEEMKKNNIHFMKAFQKIVVLF 300
           LSEYVRNQQTIGARKELQKELQEQMSRGDPFKDIILYVKEEMKKNNIHFMKAFQKIVVLF
Sbjct: 241 LSEYVRNQQTIGARKELQKELQEQMSRGDPFKDIILYVKEEMKKNNIHFMKAFQKIVVLF 300

Query: 301 YKAEVLSEEPILKWYKDAHVAKGKSVFLEQMKKFVEWLKNAEEESESEAEEGD 353
           YKAEVLSEEPILKWYKDAHVAKGKSVFLEQMKKFVEWLKNAEEESESEAEEGD
Sbjct: 301 YKAEVLSEEPILKWYKDAHVAKGKSVFLEQMKKFVEWLKNAEEESESEAEEGD 353


>gi|7661744 basic leucine zipper and W2 domains 2 [Homo sapiens]
          Length = 419

 Score =  402 bits (1034), Expect = e-112
 Identities = 195/286 (68%), Positives = 248/286 (86%), Gaps = 3/286 (1%)

Query: 5   KQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYR 64
           K QKP L+GQRFKTRKRDEKE+F+PT F+D ++QGL E G DLEAVAKFLD++G++LDYR
Sbjct: 3   KHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYR 62

Query: 65  RYAETLFDILVAGGMLAPGGTLADDMMRTDV---CVFAAQEDLETMQAFAQVFNKLIRRY 121
           RYA+TLFDILVAG MLAPGGT  DD  +T +   CVF+A ED ET++ +AQVFNKLIRRY
Sbjct: 63  RYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRY 122

Query: 122 KYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGVLLANGTLNASILNSLYNENLVKEGV 181
           KYLEK FEDE+KKLLLFLK FSE+E+ KLAML+G+LL NGTL A+IL SL+ ++LVKEG+
Sbjct: 123 KYLEKAFEDEMKKLLLFLKAFSETEQTKLAMLSGILLGNGTLPATILTSLFTDSLVKEGI 182

Query: 182 SAAFAVKLFKSWINEKDINAVAASLRKVSMDNRLMELFPANKQSVEHFTKYFTEAGLKEL 241
           +A+FAVKLFK+W+ EKD N+V +SLRK ++D RL+ELFP N+QSV+HF KYFT+AGLKEL
Sbjct: 183 AASFAVKLFKAWMAEKDANSVTSSLRKANLDKRLLELFPVNRQSVDHFAKYFTDAGLKEL 242

Query: 242 SEYVRNQQTIGARKELQKELQEQMSRGDPFKDIILYVKEEMKKNNI 287
           S+++R QQ++G RKELQKELQE++S+  P K+++LYVKEEMK+N++
Sbjct: 243 SDFLRVQQSLGTRKELQKELQERLSQECPIKEVVLYVKEEMKRNDL 288


>gi|229577398 basic leucine zipper and W2 domains 2 [Homo sapiens]
          Length = 419

 Score =  402 bits (1034), Expect = e-112
 Identities = 195/286 (68%), Positives = 248/286 (86%), Gaps = 3/286 (1%)

Query: 5   KQQKPTLSGQRFKTRKRDEKERFDPTQFQDCIIQGLTETGTDLEAVAKFLDASGAKLDYR 64
           K QKP L+GQRFKTRKRDEKE+F+PT F+D ++QGL E G DLEAVAKFLD++G++LDYR
Sbjct: 3   KHQKPVLTGQRFKTRKRDEKEKFEPTVFRDTLVQGLNEAGDDLEAVAKFLDSTGSRLDYR 62

Query: 65  RYAETLFDILVAGGMLAPGGTLADDMMRTDV---CVFAAQEDLETMQAFAQVFNKLIRRY 121
           RYA+TLFDILVAG MLAPGGT  DD  +T +   CVF+A ED ET++ +AQVFNKLIRRY
Sbjct: 63  RYADTLFDILVAGSMLAPGGTRIDDGDKTKMTNHCVFSANEDHETIRNYAQVFNKLIRRY 122

Query: 122 KYLEKGFEDEVKKLLLFLKGFSESERNKLAMLTGVLLANGTLNASILNSLYNENLVKEGV 181
           KYLEK FEDE+KKLLLFLK FSE+E+ KLAML+G+LL NGTL A+IL SL+ ++LVKEG+
Sbjct: 123 KYLEKAFEDEMKKLLLFLKAFSETEQTKLAMLSGILLGNGTLPATILTSLFTDSLVKEGI 182

Query: 182 SAAFAVKLFKSWINEKDINAVAASLRKVSMDNRLMELFPANKQSVEHFTKYFTEAGLKEL 241
           +A+FAVKLFK+W+ EKD N+V +SLRK ++D RL+ELFP N+QSV+HF KYFT+AGLKEL
Sbjct: 183 AASFAVKLFKAWMAEKDANSVTSSLRKANLDKRLLELFPVNRQSVDHFAKYFTDAGLKEL 242

Query: 242 SEYVRNQQTIGARKELQKELQEQMSRGDPFKDIILYVKEEMKKNNI 287
           S+++R QQ++G RKELQKELQE++S+  P K+++LYVKEEMK+N++
Sbjct: 243 SDFLRVQQSLGTRKELQKELQERLSQECPIKEVVLYVKEEMKRNDL 288


>gi|83267879 eukaryotic translation initiation factor 2B, subunit 5
           epsilon, 82kDa [Homo sapiens]
          Length = 721

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 22/56 (39%), Positives = 38/56 (67%), Gaps = 2/56 (3%)

Query: 295 KIVVLFYKAEVLSEEPILKWYKDAHVA-KGKSVFL-EQMKKFVEWLKNAEEESESE 348
           K+++ FY+ E+L+EE IL W+       KG+ +   +Q+++F++WLK AEEES  +
Sbjct: 665 KVLMAFYQLEILAEETILSWFSQRDTTDKGQQLRKNQQLQRFIQWLKEAEEESSED 720


>gi|10092601 eukaryotic translation initiation factor 4 gamma, 3 [Homo
            sapiens]
          Length = 1585

 Score = 42.0 bits (97), Expect = 8e-04
 Identities = 22/48 (45%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 301  YKAEVLSEEPILKWY--KDAHVAKGKSVFLEQMKKFVEWLKNAEEESE 346
            Y  EV+SE+   KW   KD     GK V L+ +  F  WL+ AEEESE
Sbjct: 1536 YDEEVISEDAFYKWESSKDPAEQNGKGVALKSVTAFFTWLREAEEESE 1583


>gi|110630018 eukaryotic translation initiation factor 4 gamma, 2
           isoform 2 [Homo sapiens]
          Length = 869

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 6/60 (10%)

Query: 295 KIVVLFYKAEVLSEEPILKWYKDA---HVAKGKSVFLEQMKKFVEWLKNA-EEESESEAE 350
           +  V FY  E++ EE  L W +D       KGK++F  Q+ +++ WL+ A EEESE EA+
Sbjct: 812 RFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALF--QVNQWLTWLETAEEEESEEEAD 869


>gi|4503539 eukaryotic translation initiation factor 4 gamma, 2
           isoform 1 [Homo sapiens]
          Length = 907

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 6/60 (10%)

Query: 295 KIVVLFYKAEVLSEEPILKWYKDA---HVAKGKSVFLEQMKKFVEWLKNA-EEESESEAE 350
           +  V FY  E++ EE  L W +D       KGK++F  Q+ +++ WL+ A EEESE EA+
Sbjct: 850 RFFVHFYDMEIIEEEAFLAWKEDITQEFPGKGKALF--QVNQWLTWLETAEEEESEEEAD 907


>gi|21361337 eukaryotic translation initiation factor 5 [Homo
           sapiens]
          Length = 431

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)

Query: 301 YKAEVLSEEPILKWYKDA---HVAKGKSVFLE-QMKKFVEWLKNAEEESESEAEEGD 353
           Y A++L EE I+ W + A   +V+K  +  +  + + F++WLK AEEES    EE +
Sbjct: 341 YDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKWLKEAEEESSGGEEEDE 397


>gi|37537716 eukaryotic translation initiation factor 5 [Homo
           sapiens]
          Length = 431

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)

Query: 301 YKAEVLSEEPILKWYKDA---HVAKGKSVFLE-QMKKFVEWLKNAEEESESEAEEGD 353
           Y A++L EE I+ W + A   +V+K  +  +  + + F++WLK AEEES    EE +
Sbjct: 341 YDADLLEEEVIISWSEKASKKYVSKELAKEIRVKAEPFIKWLKEAEEESSGGEEEDE 397


>gi|38201621 eukaryotic translation initiation factor 4 gamma, 1
            isoform 1 [Homo sapiens]
          Length = 1599

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 301  YKAEVLSEEPILKWY--KDAHVAKGKSVFLEQMKKFVEWLKNAEEESE 346
            Y  +V+ E+    W   KD    +GK V L+ +  F +WL+ AEEES+
Sbjct: 1550 YDEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFKWLREAEEESD 1597


>gi|38201627 eukaryotic translation initiation factor 4 gamma, 1
            isoform 2 [Homo sapiens]
          Length = 1512

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 301  YKAEVLSEEPILKWY--KDAHVAKGKSVFLEQMKKFVEWLKNAEEESE 346
            Y  +V+ E+    W   KD    +GK V L+ +  F +WL+ AEEES+
Sbjct: 1463 YDEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFKWLREAEEESD 1510


>gi|38201625 eukaryotic translation initiation factor 4 gamma, 1
            isoform 3 [Homo sapiens]
          Length = 1435

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 301  YKAEVLSEEPILKWY--KDAHVAKGKSVFLEQMKKFVEWLKNAEEESE 346
            Y  +V+ E+    W   KD    +GK V L+ +  F +WL+ AEEES+
Sbjct: 1386 YDEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFKWLREAEEESD 1433


>gi|38201623 eukaryotic translation initiation factor 4 gamma, 1
            isoform 1 [Homo sapiens]
          Length = 1599

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 301  YKAEVLSEEPILKWY--KDAHVAKGKSVFLEQMKKFVEWLKNAEEESE 346
            Y  +V+ E+    W   KD    +GK V L+ +  F +WL+ AEEES+
Sbjct: 1550 YDEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFKWLREAEEESD 1597


>gi|38201619 eukaryotic translation initiation factor 4 gamma, 1
            isoform 4 [Homo sapiens]
          Length = 1403

 Score = 37.0 bits (84), Expect = 0.027
 Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 301  YKAEVLSEEPILKWY--KDAHVAKGKSVFLEQMKKFVEWLKNAEEESE 346
            Y  +V+ E+    W   KD    +GK V L+ +  F +WL+ AEEES+
Sbjct: 1354 YDEDVVKEDAFYSWESSKDPAEQQGKGVALKSVTAFFKWLREAEEESD 1401


>gi|222418637 golgi autoantigen, golgin subfamily a-like [Homo
           sapiens]
          Length = 750

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 37/161 (22%), Positives = 75/161 (46%), Gaps = 14/161 (8%)

Query: 197 KDINAVAASLRKVSMDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQT-IGARK 255
           K++ +V+A L+    +N L      N+Q  E   +   E  ++E  E ++ Q+  I  ++
Sbjct: 272 KELQSVSAKLQAQVEENELWNRL--NQQQEEKMWRQ--EEKIQEWEEKIQEQEEKIREQE 327

Query: 256 ELQKELQEQMSRGDPFKDIILYVKEEMKKNNIHFM-----KAFQKIVVLFYKAEVLSEEP 310
           E  +E +E+M R    ++ +++ KEE  +     M     K  ++  +++ K E +  + 
Sbjct: 328 EKIREQEEKMRR----QEEMMWEKEEKMRRQEEMMWEKEEKMRRQEEMMWEKEEKMRRQE 383

Query: 311 ILKWYKDAHVAKGKSVFLEQMKKFVEWLKNAEEESESEAEE 351
            + W K+  + + +    EQ K   +  K  EEE   E E+
Sbjct: 384 EMMWEKEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 424


>gi|115298659 spectrin, alpha, erythrocytic 1 [Homo sapiens]
          Length = 2419

 Score = 33.5 bits (75), Expect = 0.30
 Identities = 39/181 (21%), Positives = 80/181 (44%), Gaps = 19/181 (10%)

Query: 168  LNSLYNENLVKEGVSAAFAVKLFKSWINEKDINA---VAASLRKVSMDNRLMELFPANKQ 224
            LN+L  E+L+  G      +   K  +N++ +N     AA   K+     L + F    Q
Sbjct: 1666 LNTLA-EDLLSSGTFNVDQIVKKKDNVNKRFLNVQELAAAHHEKLKEAYALFQFF----Q 1720

Query: 225  SVEHFTKYFTEAGLKELSE-YVRNQQTIGARKELQKELQEQMSRGDPFKDIILYVKEEMK 283
             ++    +  E  ++  S+ Y R+ Q +    +  K L+ ++   +P    +L + E++K
Sbjct: 1721 DLDDEESWIEEKLIRVSSQDYGRDLQGVQNLLKKHKRLEGELVAHEPAIQNVLDMAEKLK 1780

Query: 284  KNNIHFMKAFQKIVVLFYKAEVLSEEPILKWYKDAHVAKGKSVFLEQMKKFVEWLKNAEE 343
                   +  Q  +  F +           W K   +AK + + LE+  +++++++NAEE
Sbjct: 1781 DKAAVGQEEIQLRLAQFVE----------HWEKLKELAKARGLKLEESLEYLQFMQNAEE 1830

Query: 344  E 344
            E
Sbjct: 1831 E 1831


>gi|239745079 PREDICTED: Putative golgin subfamily A member 6-like
           protein 6 [Homo sapiens]
          Length = 724

 Score = 32.7 bits (73), Expect = 0.50
 Identities = 36/156 (23%), Positives = 70/156 (44%), Gaps = 18/156 (11%)

Query: 197 KDINAVAASLRKVSMDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQT-IGARK 255
           K++ +V+A L+    +N L      N+Q  E   +   E  ++E  E ++ Q+  I  ++
Sbjct: 333 KELQSVSAKLQAQVEENELWNRL--NQQQEEKMWRQ--EEKIQEWEEKIQEQEEKIREQE 388

Query: 256 ELQKELQEQMSRGDPFKDIILYVKEEMKKNNIHFMKAFQKIVVLFYKAEVLSEEPILKWY 315
           E  +E +E+M R    ++ +++ KEE  +     M         + K E +  +  + W 
Sbjct: 389 EKIREQEEKMRR----QEEMMWEKEEKMRRQEEMM---------WEKEEKMRRQEEMMWE 435

Query: 316 KDAHVAKGKSVFLEQMKKFVEWLKNAEEESESEAEE 351
           K+  + + +    EQ K   +  K  EEE   E E+
Sbjct: 436 KEEKIRELEEKMHEQEKIREQEEKRQEEEKIREQEK 471


>gi|32967514 neurofibromin 2 isoform 7 [Homo sapiens]
          Length = 507

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)

Query: 258 QKELQEQMSRG-DPFKDIILYVKEEMKKNNIHFMKAFQKIVVLFYKAEVLSEEPILKWYK 316
           +K+++E+  R  D  +  +L +KEE    N   M++ +   +L  KA++  EE  L   K
Sbjct: 259 EKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQK 318

Query: 317 DAHV------AKGKSVFLEQMKKFVEW---------LKNAEEESESEAEEGD 353
            A         K  ++  E+ K+ +E          LK A EESE  A+E D
Sbjct: 319 AAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMA-EESERRAKEAD 369


>gi|32967254 neurofibromin 2 isoform 2 [Homo sapiens]
          Length = 590

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)

Query: 258 QKELQEQMSRG-DPFKDIILYVKEEMKKNNIHFMKAFQKIVVLFYKAEVLSEEPILKWYK 316
           +K+++E+  R  D  +  +L +KEE    N   M++ +   +L  KA++  EE  L   K
Sbjct: 342 EKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQK 401

Query: 317 DAHV------AKGKSVFLEQMKKFVEW---------LKNAEEESESEAEEGD 353
            A         K  ++  E+ K+ +E          LK A EESE  A+E D
Sbjct: 402 AAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMA-EESERRAKEAD 452


>gi|32967266 neurofibromin 2 isoform 2 [Homo sapiens]
          Length = 590

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)

Query: 258 QKELQEQMSRG-DPFKDIILYVKEEMKKNNIHFMKAFQKIVVLFYKAEVLSEEPILKWYK 316
           +K+++E+  R  D  +  +L +KEE    N   M++ +   +L  KA++  EE  L   K
Sbjct: 342 EKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQK 401

Query: 317 DAHV------AKGKSVFLEQMKKFVEW---------LKNAEEESESEAEEGD 353
            A         K  ++  E+ K+ +E          LK A EESE  A+E D
Sbjct: 402 AAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMA-EESERRAKEAD 452


>gi|32967264 neurofibromin 2 isoform 7 [Homo sapiens]
          Length = 507

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)

Query: 258 QKELQEQMSRG-DPFKDIILYVKEEMKKNNIHFMKAFQKIVVLFYKAEVLSEEPILKWYK 316
           +K+++E+  R  D  +  +L +KEE    N   M++ +   +L  KA++  EE  L   K
Sbjct: 259 EKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQK 318

Query: 317 DAHV------AKGKSVFLEQMKKFVEW---------LKNAEEESESEAEEGD 353
            A         K  ++  E+ K+ +E          LK A EESE  A+E D
Sbjct: 319 AAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMA-EESERRAKEAD 369


>gi|32967262 neurofibromin 2 isoform 6 [Homo sapiens]
          Length = 549

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)

Query: 258 QKELQEQMSRG-DPFKDIILYVKEEMKKNNIHFMKAFQKIVVLFYKAEVLSEEPILKWYK 316
           +K+++E+  R  D  +  +L +KEE    N   M++ +   +L  KA++  EE  L   K
Sbjct: 301 EKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQK 360

Query: 317 DAHV------AKGKSVFLEQMKKFVEW---------LKNAEEESESEAEEGD 353
            A         K  ++  E+ K+ +E          LK A EESE  A+E D
Sbjct: 361 AAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMA-EESERRAKEAD 411


>gi|32967260 neurofibromin 2 isoform 5 [Homo sapiens]
          Length = 548

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)

Query: 258 QKELQEQMSRG-DPFKDIILYVKEEMKKNNIHFMKAFQKIVVLFYKAEVLSEEPILKWYK 316
           +K+++E+  R  D  +  +L +KEE    N   M++ +   +L  KA++  EE  L   K
Sbjct: 300 EKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQK 359

Query: 317 DAHV------AKGKSVFLEQMKKFVEW---------LKNAEEESESEAEEGD 353
            A         K  ++  E+ K+ +E          LK A EESE  A+E D
Sbjct: 360 AAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMA-EESERRAKEAD 410


>gi|32451486 neurofibromin 2 isoform 2 [Homo sapiens]
          Length = 590

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)

Query: 258 QKELQEQMSRG-DPFKDIILYVKEEMKKNNIHFMKAFQKIVVLFYKAEVLSEEPILKWYK 316
           +K+++E+  R  D  +  +L +KEE    N   M++ +   +L  KA++  EE  L   K
Sbjct: 342 EKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQK 401

Query: 317 DAHV------AKGKSVFLEQMKKFVEW---------LKNAEEESESEAEEGD 353
            A         K  ++  E+ K+ +E          LK A EESE  A+E D
Sbjct: 402 AAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMA-EESERRAKEAD 452


>gi|4557795 neurofibromin 2 isoform 1 [Homo sapiens]
          Length = 595

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 32/112 (28%), Positives = 52/112 (46%), Gaps = 17/112 (15%)

Query: 258 QKELQEQMSRG-DPFKDIILYVKEEMKKNNIHFMKAFQKIVVLFYKAEVLSEEPILKWYK 316
           +K+++E+  R  D  +  +L +KEE    N   M++ +   +L  KA++  EE  L   K
Sbjct: 342 EKQMREEAERTRDELERRLLQMKEEATMANEALMRSEETADLLAEKAQITEEEAKLLAQK 401

Query: 317 DAHV------AKGKSVFLEQMKKFVEW---------LKNAEEESESEAEEGD 353
            A         K  ++  E+ K+ +E          LK A EESE  A+E D
Sbjct: 402 AAEAEQEMQRIKATAIRTEEEKRLMEQKVLEAEVLALKMA-EESERRAKEAD 452


>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
          Length = 1710

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 20/102 (19%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 242  SEYVRNQQTIGARKELQKELQEQMSR--GDPFKDIILYVK---------EEMKKNNIHFM 290
            S   RN   +G  K+ ++E++E+  +   +  K++ L+++         E+ ++NN   M
Sbjct: 1463 SHIERNMVELGQVKQYKQEIEERARQEIAEKLKEVNLFLQAQAASQENLEQFRENNFASM 1522

Query: 291  KAFQKIVVLFYKAEVLSEEPILKWYKDAHVAKGKSVFLEQMK 332
            K+  ++ +   ++E+   +   + +    + K K ++LE++K
Sbjct: 1523 KSQMELRIKDLESELSKIKTSQEDFNKTELEKYKQLYLEELK 1564


>gi|38348729 hypothetical protein LOC203238 [Homo sapiens]
          Length = 1326

 Score = 31.2 bits (69), Expect = 1.5
 Identities = 24/109 (22%), Positives = 54/109 (49%), Gaps = 10/109 (9%)

Query: 196 EKDINAVAASLRKVSMDNRLMELFPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARK 255
           +++++A+ A L + +   R +E    NK       +   E    +++E ++ Q++   R+
Sbjct: 604 QENVDALIADLNRANEKIRHLEYICKNKSDTMRELQQTQEDTFTKVAEQIKAQESCWHRQ 663

Query: 256 ELQKELQ------EQMSRGDPFKDIILYVKEEMKKNNIHFMKAFQKIVV 298
           + + ELQ      E   R   F++I    ++ M+K N H  K+ +++V+
Sbjct: 664 KKELELQYSELFLEVQKRAQKFQEI---AEKNMEKLN-HIEKSHEQLVL 708


>gi|210147567 hypothetical protein LOC220081 [Homo sapiens]
          Length = 696

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 18/121 (14%)

Query: 231 KYFTEAGLKELSEYVRNQQTIGARKELQKELQEQMSRGDPFKDIILYVKEEMKKNNIHFM 290
           +Y  +AG  E  EY+  ++ +G  KE   E +E + + +  ++     +E + K      
Sbjct: 96  EYLEKAGYLEEEEYIEEEEYLG--KEGYLEEEEYLGKEEHLEE-----EEYLGKEGYLEK 148

Query: 291 KAFQKIVVLFYKAEVLSEEPILKWYKDAHVAKGKSVFLEQMKKFVEWLKNAEEESESEAE 350
           + + + V    K   L EE  L          GK  +LE+ +K +E  +N EEE   E E
Sbjct: 149 EDYIEEVDYLGKKAYLEEEEYL----------GKKSYLEE-EKALEKEENLEEEEALEKE 197

Query: 351 E 351
           E
Sbjct: 198 E 198


>gi|28558993 intraflagellar transport 88 homolog isoform 1 [Homo
           sapiens]
          Length = 833

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 219 FPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQ 264
           FP N + +    +  T+ GLK+  EY R  +    R E  KE++EQ
Sbjct: 693 FPENVECLRFLVRLCTDLGLKDAQEYARKLK----RLEKMKEIREQ 734


>gi|28329439 intraflagellar transport 88 homolog isoform 2 [Homo
           sapiens]
          Length = 824

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 4/46 (8%)

Query: 219 FPANKQSVEHFTKYFTEAGLKELSEYVRNQQTIGARKELQKELQEQ 264
           FP N + +    +  T+ GLK+  EY R  +    R E  KE++EQ
Sbjct: 684 FPENVECLRFLVRLCTDLGLKDAQEYARKLK----RLEKMKEIREQ 725


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.132    0.365 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,661,318
Number of Sequences: 37866
Number of extensions: 465628
Number of successful extensions: 1778
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 1729
Number of HSP's gapped (non-prelim): 95
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.